RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 NOTCH1P46531 2555 aa18.25■□□□□ 0.51
HDDC3-203ENST00000494993 TNFRSF11BO00300 401 aa18.24■□□□□ 0.51
HDDC3-203ENST00000494993 ECDO95905 644 aaPredicted RBP18.24■□□□□ 0.51
HDDC3-203ENST00000494993 DDOSTP39656 456 aa18.24■□□□□ 0.51
HDDC3-203ENST00000494993 POU4F2Q12837 409 aa18.24■□□□□ 0.51
HDDC3-203ENST00000494993 CRMP1Q14194 572 aa18.24■□□□□ 0.51
HDDC3-203ENST00000494993 RASSF6Q6ZTQ3 369 aa18.24■□□□□ 0.51
HDDC3-203ENST00000494993 ZNF511Q8NB15 262 aa18.24■□□□□ 0.51
HDDC3-203ENST00000494993 DYRK2Q92630 601 aa18.24■□□□□ 0.51
HDDC3-203ENST00000494993 TBC1D23Q9NUY8 699 aa18.24■□□□□ 0.51
HDDC3-203ENST00000494993 IGHV3OR15-7A0A075B7D8 119 aa18.23■□□□□ 0.51
HDDC3-203ENST00000494993 ANKRD30BLA7E2S9 258 aa18.23■□□□□ 0.51
HDDC3-203ENST00000494993 ZNF593O00488 134 aaPredicted RBP18.23■□□□□ 0.51
HDDC3-203ENST00000494993 GYPBP06028 91 aa18.23■□□□□ 0.51
HDDC3-203ENST00000494993 TEX30Q5JUR7 227 aa18.23■□□□□ 0.51
HDDC3-203ENST00000494993 ZNF770Q6IQ21 691 aaPredicted RBP18.23■□□□□ 0.51
HDDC3-203ENST00000494993 WDR86Q86TI4 376 aa18.23■□□□□ 0.51
HDDC3-203ENST00000494993 LDLRAD3Q86YD5 345 aa18.23■□□□□ 0.51
HDDC3-203ENST00000494993 C11orf53Q8IXP5 236 aa18.23■□□□□ 0.51
HDDC3-203ENST00000494993 SCCPDHQ8NBX0 429 aa18.23■□□□□ 0.51
HDDC3-203ENST00000494993 OR8S1Q8NH09 359 aa18.23■□□□□ 0.51
HDDC3-203ENST00000494993 ST8SIA4Q92187 359 aa18.23■□□□□ 0.51
HDDC3-203ENST00000494993 NMNAT2Q9BZQ4 307 aa18.23■□□□□ 0.51
HDDC3-203ENST00000494993 FAM107BQ9H098 131 aa18.23■□□□□ 0.51
HDDC3-203ENST00000494993 RNPEPL1Q9HAU8 725 aa18.23■□□□□ 0.51
HDDC3-203ENST00000494993 RPUSD1Q9UJJ7 312 aaKnown RBP18.23■□□□□ 0.51
HDDC3-203ENST00000494993 A0A0U1RQK1 487 aa18.22■□□□□ 0.51
HDDC3-203ENST00000494993 TBX1O43435 398 aa18.22■□□□□ 0.51
HDDC3-203ENST00000494993 GPR137BO60478 399 aa18.22■□□□□ 0.51
HDDC3-203ENST00000494993 SNX3O60493 162 aa18.22■□□□□ 0.51
HDDC3-203ENST00000494993 GASTP01350 101 aa18.22■□□□□ 0.51
HDDC3-203ENST00000494993 SPI1P17947 270 aa18.22■□□□□ 0.51
HDDC3-203ENST00000494993 GRK5P34947 590 aa18.22■□□□□ 0.51
HDDC3-203ENST00000494993 SLC25A1P53007 311 aa18.22■□□□□ 0.51
HDDC3-203ENST00000494993 GRB2P62993 217 aaKnown RBP18.22■□□□□ 0.51
HDDC3-203ENST00000494993 SLC16A9Q7RTY1 509 aa18.22■□□□□ 0.51
HDDC3-203ENST00000494993 LRRC29Q8WV35 223 aa18.22■□□□□ 0.51
HDDC3-203ENST00000494993 CCT8L2Q96SF2 557 aa18.22■□□□□ 0.51
HDDC3-203ENST00000494993 TSSK6Q9BXA6 273 aa18.22■□□□□ 0.51
HDDC3-203ENST00000494993 CNTD2Q9H8S5 307 aa18.22■□□□□ 0.51
HDDC3-203ENST00000494993 KPTNQ9Y664 436 aa18.22■□□□□ 0.51
HDDC3-203ENST00000494993 A0A1B0GW55 424 aa18.21■□□□□ 0.51
HDDC3-203ENST00000494993 DHRS12A0PJE2 317 aa18.21■□□□□ 0.51
HDDC3-203ENST00000494993 CCNB2O95067 398 aa18.21■□□□□ 0.51
HDDC3-203ENST00000494993 IGHV4-59P01825 116 aa18.21■□□□□ 0.51
HDDC3-203ENST00000494993 DUX4L2P0CJ85 424 aa18.21■□□□□ 0.51
HDDC3-203ENST00000494993 DUX4L3P0CJ86 424 aa18.21■□□□□ 0.51
HDDC3-203ENST00000494993 DUX4L4P0CJ87 422 aa18.21■□□□□ 0.51
HDDC3-203ENST00000494993 DUX4L5P0CJ88 424 aa18.21■□□□□ 0.51
HDDC3-203ENST00000494993 DUX4L6P0CJ89 424 aa18.21■□□□□ 0.51
HDDC3-203ENST00000494993 DUX4L7P0CJ90 424 aa18.21■□□□□ 0.51
HDDC3-203ENST00000494993 CLUP10909 449 aa18.21■□□□□ 0.51
HDDC3-203ENST00000494993 MUC1P15941 1255 aaPredicted RBP18.21■□□□□ 0.51
HDDC3-203ENST00000494993 SLC15A1P46059 708 aa18.21■□□□□ 0.51
HDDC3-203ENST00000494993 IER3P46695 156 aa18.21■□□□□ 0.51
HDDC3-203ENST00000494993 CX3CR1P49238 355 aa18.21■□□□□ 0.51
HDDC3-203ENST00000494993 FAM3AP98173 230 aa18.21■□□□□ 0.51
HDDC3-203ENST00000494993 TIGD6Q17RP2 521 aa18.21■□□□□ 0.51
HDDC3-203ENST00000494993 MICBQ29980 383 aa18.21■□□□□ 0.51
HDDC3-203ENST00000494993 CDONQ4KMG0 1287 aa18.21■□□□□ 0.51
HDDC3-203ENST00000494993 DUX4L9Q6RFH8 374 aaPredicted RBP18.21■□□□□ 0.51
HDDC3-203ENST00000494993 DPY19L4Q7Z388 723 aa18.21■□□□□ 0.51
HDDC3-203ENST00000494993 FGFRL1Q8N441 504 aa18.21■□□□□ 0.51
HDDC3-203ENST00000494993 OR6K6Q8NGW6 343 aa18.21■□□□□ 0.51
HDDC3-203ENST00000494993 OR4Q3Q8NH05 313 aa18.21■□□□□ 0.51
HDDC3-203ENST00000494993 DUX4Q9UBX2 424 aa18.21■□□□□ 0.51
HDDC3-203ENST00000494993 BAIAP2Q9UQB8 552 aa18.21■□□□□ 0.51
HDDC3-203ENST00000494993 RNF114Q9Y508 228 aa18.21■□□□□ 0.51
HDDC3-203ENST00000494993 M0QZ24 198 aa18.2■□□□□ 0.5
HDDC3-203ENST00000494993 TIMM23O14925 209 aa18.2■□□□□ 0.5
HDDC3-203ENST00000494993 ANXA2P07355 339 aaKnown RBP18.2■□□□□ 0.5
HDDC3-203ENST00000494993 MAGEA2P43356 314 aa18.2■□□□□ 0.5
HDDC3-203ENST00000494993 KRTAP10-3P60369 221 aa18.2■□□□□ 0.5
HDDC3-203ENST00000494993 ELF3P78545 371 aaPredicted RBP18.2■□□□□ 0.5
HDDC3-203ENST00000494993 EIF2B1Q14232 305 aaKnown RBP18.2■□□□□ 0.5
HDDC3-203ENST00000494993 WDR38Q5JTN6 314 aa18.2■□□□□ 0.5
HDDC3-203ENST00000494993 RHOUQ7L0Q8 258 aa18.2■□□□□ 0.5
HDDC3-203ENST00000494993 VMO1Q7Z5L0 202 aa18.2■□□□□ 0.5
HDDC3-203ENST00000494993 PDZD9Q8IXQ8 264 aa18.2■□□□□ 0.5
HDDC3-203ENST00000494993 PIP4P2Q8N4L2 257 aa18.2■□□□□ 0.5
HDDC3-203ENST00000494993 AQP11Q8NBQ7 271 aa18.2■□□□□ 0.5
HDDC3-203ENST00000494993 OR1M1Q8NGA1 313 aa18.2■□□□□ 0.5
HDDC3-203ENST00000494993 REEP6Q96HR9 211 aa18.2■□□□□ 0.5
HDDC3-203ENST00000494993 CCL13Q99616 98 aa18.2■□□□□ 0.5
HDDC3-203ENST00000494993 TOR3AQ9H497 397 aa18.2■□□□□ 0.5
HDDC3-203ENST00000494993 TAGLN3Q9UI15 199 aa18.2■□□□□ 0.5
HDDC3-203ENST00000494993 PRKDCP78527 4128 aaKnown RBP18.19■□□□□ 0.5
HDDC3-203ENST00000494993 hCG_38984A0A1B0GV85 526 aa18.19■□□□□ 0.5
HDDC3-203ENST00000494993 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.19■□□□□ 0.5
HDDC3-203ENST00000494993 TIPRLO75663 272 aa18.19■□□□□ 0.5
HDDC3-203ENST00000494993 SOX14O95416 240 aa18.19■□□□□ 0.5
HDDC3-203ENST00000494993 HSD11B1P28845 292 aa18.19■□□□□ 0.5
HDDC3-203ENST00000494993 BLVRAP53004 296 aa18.19■□□□□ 0.5
HDDC3-203ENST00000494993 CSNK2BP67870 215 aa18.19■□□□□ 0.5
HDDC3-203ENST00000494993 PPP1R8Q12972 351 aaKnown RBP18.19■□□□□ 0.5
HDDC3-203ENST00000494993 SPATS1Q496A3 300 aa18.19■□□□□ 0.5
HDDC3-203ENST00000494993 LINC01590Q5TEZ4 76 aa18.19■□□□□ 0.5
HDDC3-203ENST00000494993 C16orf89Q6UX73 402 aa18.19■□□□□ 0.5
HDDC3-203ENST00000494993 WDR82Q6UXN9 313 aa18.19■□□□□ 0.5
HDDC3-203ENST00000494993 CYP2R1Q6VVX0 501 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms