RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 DYRK2Q92630 601 aa19.21■□□□□ 0.67
COL27A1-208ENST00000494780 LHX4Q969G2 390 aa19.21■□□□□ 0.67
COL27A1-208ENST00000494780 CITED1Q99966 193 aa19.21■□□□□ 0.67
COL27A1-208ENST00000494780 NMNAT2Q9BZQ4 307 aa19.21■□□□□ 0.67
COL27A1-208ENST00000494780 RNPEPL1Q9HAU8 725 aa19.21■□□□□ 0.67
COL27A1-208ENST00000494780 TBC1D23Q9NUY8 699 aa19.21■□□□□ 0.67
COL27A1-208ENST00000494780 N6AMT1Q9Y5N5 214 aa19.21■□□□□ 0.67
COL27A1-208ENST00000494780 FCN3O75636 299 aa19.2■□□□□ 0.66
COL27A1-208ENST00000494780 GASTP01350 101 aa19.2■□□□□ 0.66
COL27A1-208ENST00000494780 SLC15A1P46059 708 aa19.2■□□□□ 0.66
COL27A1-208ENST00000494780 SLC25A1P53007 311 aa19.2■□□□□ 0.66
COL27A1-208ENST00000494780 ARF6P62330 175 aa19.2■□□□□ 0.66
COL27A1-208ENST00000494780 GRB2P62993 217 aaKnown RBP19.2■□□□□ 0.66
COL27A1-208ENST00000494780 CRMP1Q14194 572 aa19.2■□□□□ 0.66
COL27A1-208ENST00000494780 OR8S1Q8NH09 359 aa19.2■□□□□ 0.66
COL27A1-208ENST00000494780 TSSK6Q9BXA6 273 aa19.2■□□□□ 0.66
COL27A1-208ENST00000494780 FAM107BQ9H098 131 aa19.2■□□□□ 0.66
COL27A1-208ENST00000494780 SP140LQ9H930 580 aa19.2■□□□□ 0.66
COL27A1-208ENST00000494780 PDP1Q9P0J1 537 aaPredicted RBP19.2■□□□□ 0.66
COL27A1-208ENST00000494780 BAIAP2Q9UQB8 552 aa19.2■□□□□ 0.66
COL27A1-208ENST00000494780 CCNB2O95067 398 aa19.19■□□□□ 0.66
COL27A1-208ENST00000494780 GYPBP06028 91 aa19.19■□□□□ 0.66
COL27A1-208ENST00000494780 SPI1P17947 270 aa19.19■□□□□ 0.66
COL27A1-208ENST00000494780 BLVRAP53004 296 aa19.19■□□□□ 0.66
COL27A1-208ENST00000494780 BRICD5Q6PL45 260 aa19.19■□□□□ 0.66
COL27A1-208ENST00000494780 LDLRAD3Q86YD5 345 aa19.19■□□□□ 0.66
COL27A1-208ENST00000494780 C11orf53Q8IXP5 236 aa19.19■□□□□ 0.66
COL27A1-208ENST00000494780 ST8SIA4Q92187 359 aa19.19■□□□□ 0.66
COL27A1-208ENST00000494780 TOR3AQ9H497 397 aa19.19■□□□□ 0.66
COL27A1-208ENST00000494780 CNTD2Q9H8S5 307 aa19.19■□□□□ 0.66
COL27A1-208ENST00000494780 NDE1Q9NXR1 346 aa19.19■□□□□ 0.66
COL27A1-208ENST00000494780 TAGLN3Q9UI15 199 aa19.19■□□□□ 0.66
COL27A1-208ENST00000494780 RPUSD1Q9UJJ7 312 aaKnown RBP19.19■□□□□ 0.66
COL27A1-208ENST00000494780 KPTNQ9Y664 436 aa19.19■□□□□ 0.66
COL27A1-208ENST00000494780 IGHV3OR15-7A0A075B7D8 119 aa19.18■□□□□ 0.66
COL27A1-208ENST00000494780 TBX1O43435 398 aa19.18■□□□□ 0.66
COL27A1-208ENST00000494780 MUC1P15941 1255 aaPredicted RBP19.18■□□□□ 0.66
COL27A1-208ENST00000494780 FAM3AP98173 230 aa19.18■□□□□ 0.66
COL27A1-208ENST00000494780 POU4F2Q12837 409 aa19.18■□□□□ 0.66
COL27A1-208ENST00000494780 MICBQ29980 383 aa19.18■□□□□ 0.66
COL27A1-208ENST00000494780 MIDNQ504T8 468 aa19.18■□□□□ 0.66
COL27A1-208ENST00000494780 C16orf89Q6UX73 402 aa19.18■□□□□ 0.66
COL27A1-208ENST00000494780 SLC16A9Q7RTY1 509 aa19.18■□□□□ 0.66
COL27A1-208ENST00000494780 SCCPDHQ8NBX0 429 aa19.18■□□□□ 0.66
COL27A1-208ENST00000494780 A0A0U1RQK1 487 aa19.17■□□□□ 0.66
COL27A1-208ENST00000494780 DHRS12A0PJE2 317 aa19.17■□□□□ 0.66
COL27A1-208ENST00000494780 TIPRLO75663 272 aa19.17■□□□□ 0.66
COL27A1-208ENST00000494780 APOC1P02654 83 aa19.17■□□□□ 0.66
COL27A1-208ENST00000494780 MAGEA2P43356 314 aa19.17■□□□□ 0.66
COL27A1-208ENST00000494780 CX3CR1P49238 355 aa19.17■□□□□ 0.66
COL27A1-208ENST00000494780 TIGD6Q17RP2 521 aa19.17■□□□□ 0.66
COL27A1-208ENST00000494780 CDONQ4KMG0 1287 aa19.17■□□□□ 0.66
COL27A1-208ENST00000494780 DPY19L4Q7Z388 723 aa19.17■□□□□ 0.66
COL27A1-208ENST00000494780 WDR86Q86TI4 376 aa19.17■□□□□ 0.66
COL27A1-208ENST00000494780 DEFB107AQ8IZN7 70 aa19.17■□□□□ 0.66
COL27A1-208ENST00000494780 AQP11Q8NBQ7 271 aa19.17■□□□□ 0.66
COL27A1-208ENST00000494780 OR2T33Q8NG76 320 aa19.17■□□□□ 0.66
COL27A1-208ENST00000494780 OR6K6Q8NGW6 343 aa19.17■□□□□ 0.66
COL27A1-208ENST00000494780 OR4Q3Q8NH05 313 aa19.17■□□□□ 0.66
COL27A1-208ENST00000494780 LRRC29Q8WV35 223 aa19.17■□□□□ 0.66
COL27A1-208ENST00000494780 SGK3Q96BR1 496 aa19.17■□□□□ 0.66
COL27A1-208ENST00000494780 REEP6Q96HR9 211 aa19.17■□□□□ 0.66
COL27A1-208ENST00000494780 DMRTB1Q96MA1 342 aa19.17■□□□□ 0.66
COL27A1-208ENST00000494780 M0QZ24 198 aa19.16■□□□□ 0.66
COL27A1-208ENST00000494780 TIMM23O14925 209 aa19.16■□□□□ 0.66
COL27A1-208ENST00000494780 GPR137BO60478 399 aa19.16■□□□□ 0.66
COL27A1-208ENST00000494780 IFNGP01579 166 aa19.16■□□□□ 0.66
COL27A1-208ENST00000494780 IGHV4-59P01825 116 aa19.16■□□□□ 0.66
COL27A1-208ENST00000494780 ANXA2P07355 339 aaKnown RBP19.16■□□□□ 0.66
COL27A1-208ENST00000494780 CLUP10909 449 aa19.16■□□□□ 0.66
COL27A1-208ENST00000494780 CFL1P23528 166 aaKnown RBP19.16■□□□□ 0.66
COL27A1-208ENST00000494780 HSD11B1P28845 292 aa19.16■□□□□ 0.66
COL27A1-208ENST00000494780 IER3P46695 156 aa19.16■□□□□ 0.66
COL27A1-208ENST00000494780 CPLX4Q7Z7G2 160 aa19.16■□□□□ 0.66
COL27A1-208ENST00000494780 OR1M1Q8NGA1 313 aa19.16■□□□□ 0.66
COL27A1-208ENST00000494780 CCT8L2Q96SF2 557 aa19.16■□□□□ 0.66
COL27A1-208ENST00000494780 CCL13Q99616 98 aa19.16■□□□□ 0.66
COL27A1-208ENST00000494780 ARL8BQ9NVJ2 186 aa19.16■□□□□ 0.66
COL27A1-208ENST00000494780 ACTR3BQ9P1U1 418 aa19.16■□□□□ 0.66
COL27A1-208ENST00000494780 RNF114Q9Y508 228 aa19.16■□□□□ 0.66
COL27A1-208ENST00000494780 hCG_38984A0A1B0GV85 526 aa19.15■□□□□ 0.66
COL27A1-208ENST00000494780 A0A1B0GVI7 797 aa19.15■□□□□ 0.66
COL27A1-208ENST00000494780 NAA10P41227 235 aaPredicted RBP19.15■□□□□ 0.66
COL27A1-208ENST00000494780 EIF2B1Q14232 305 aaKnown RBP19.15■□□□□ 0.66
COL27A1-208ENST00000494780 WDR38Q5JTN6 314 aa19.15■□□□□ 0.66
COL27A1-208ENST00000494780 LINC01590Q5TEZ4 76 aa19.15■□□□□ 0.66
COL27A1-208ENST00000494780 WDR82Q6UXN9 313 aa19.15■□□□□ 0.66
COL27A1-208ENST00000494780 CYP2R1Q6VVX0 501 aa19.15■□□□□ 0.66
COL27A1-208ENST00000494780 SLC36A1Q7Z2H8 476 aa19.15■□□□□ 0.66
COL27A1-208ENST00000494780 VMO1Q7Z5L0 202 aa19.15■□□□□ 0.66
COL27A1-208ENST00000494780 LY6G5BQ8NDX9 201 aa19.15■□□□□ 0.66
COL27A1-208ENST00000494780 OR52H1Q8NGJ2 320 aa19.15■□□□□ 0.66
COL27A1-208ENST00000494780 LINC01006Q8NI28 216 aa19.15■□□□□ 0.66
COL27A1-208ENST00000494780 RNF133Q8WVZ7 376 aa19.15■□□□□ 0.66
COL27A1-208ENST00000494780 C12orf43Q96C57 262 aaKnown RBP19.15■□□□□ 0.66
COL27A1-208ENST00000494780 DGCR6LQ9BY27 220 aa19.15■□□□□ 0.66
COL27A1-208ENST00000494780 DPAGT1Q9H3H5 408 aa19.15■□□□□ 0.66
COL27A1-208ENST00000494780 RIIAD1A6NNX1 92 aa19.14■□□□□ 0.65
COL27A1-208ENST00000494780 GPR37O15354 613 aa19.14■□□□□ 0.65
COL27A1-208ENST00000494780 ZNF3P17036 446 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms