RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 TNFRSF1AP19438 455 aa11.46□□□□□ -0.57
COL1A1-208ENST00000494334 USF1P22415 310 aaPredicted RBP11.46□□□□□ -0.57
COL1A1-208ENST00000494334 ACKR3P25106 362 aa11.46□□□□□ -0.57
COL1A1-208ENST00000494334 GPR6P46095 362 aaPredicted RBP11.46□□□□□ -0.57
COL1A1-208ENST00000494334 OR12D2P58182 307 aa11.46□□□□□ -0.57
COL1A1-208ENST00000494334 HNRNPA0Q13151 305 aaKnown RBP11.46□□□□□ -0.57
COL1A1-208ENST00000494334 MAB21L1Q13394 359 aa11.46□□□□□ -0.57
COL1A1-208ENST00000494334 HFEQ30201 348 aa11.46□□□□□ -0.57
COL1A1-208ENST00000494334 CDONQ4KMG0 1287 aa11.46□□□□□ -0.57
COL1A1-208ENST00000494334 C6orf52Q5T4I8 152 aa11.46□□□□□ -0.57
COL1A1-208ENST00000494334 LAIR2Q6ISS4 152 aa11.46□□□□□ -0.57
COL1A1-208ENST00000494334 KCTD20Q7Z5Y7 419 aa11.46□□□□□ -0.57
COL1A1-208ENST00000494334 LHFPL3Q86UP9 236 aa11.46□□□□□ -0.57
COL1A1-208ENST00000494334 ELMOD2Q8IZ81 293 aa11.46□□□□□ -0.57
COL1A1-208ENST00000494334 OR51E1Q8TCB6 317 aa11.46□□□□□ -0.57
COL1A1-208ENST00000494334 FBLIM1Q8WUP2 373 aa11.46□□□□□ -0.57
COL1A1-208ENST00000494334 DVL3Q92997 716 aaPredicted RBP11.46□□□□□ -0.57
COL1A1-208ENST00000494334 RNF166Q96A37 237 aaPredicted RBP11.46□□□□□ -0.57
COL1A1-208ENST00000494334 MEGF10Q96KG7 1140 aa11.46□□□□□ -0.57
COL1A1-208ENST00000494334 VCX3BQ9H321 246 aa11.46□□□□□ -0.57
COL1A1-208ENST00000494334 GSX1Q9H4S2 264 aaPredicted RBP11.46□□□□□ -0.57
COL1A1-208ENST00000494334 MOB1AQ9H8S9 216 aa11.46□□□□□ -0.57
COL1A1-208ENST00000494334 ACOXLQ9NUZ1 547 aa11.46□□□□□ -0.57
COL1A1-208ENST00000494334 GNG8Q9UK08 70 aa11.46□□□□□ -0.57
COL1A1-208ENST00000494334 GTF2A1LQ9UNN4 478 aa11.46□□□□□ -0.57
COL1A1-208ENST00000494334 SLC22A13Q9Y226 551 aa11.46□□□□□ -0.57
COL1A1-208ENST00000494334 HIVEP1P15822 2718 aa11.46□□□□□ -0.58
COL1A1-208ENST00000494334 CHD3Q12873 2000 aaKnown RBP11.45□□□□□ -0.58
COL1A1-208ENST00000494334 IGHV4-61A0A0C4DH41 118 aa11.45□□□□□ -0.58
COL1A1-208ENST00000494334 IGHV3-64DA0A0J9YX35 117 aa11.45□□□□□ -0.58
COL1A1-208ENST00000494334 ANKRD30BLA7E2S9 258 aa11.45□□□□□ -0.58
COL1A1-208ENST00000494334 PPIHO43447 177 aaKnown RBP11.45□□□□□ -0.58
COL1A1-208ENST00000494334 GMDSO60547 372 aa11.45□□□□□ -0.58
COL1A1-208ENST00000494334 TACSTD2P09758 323 aa11.45□□□□□ -0.58
COL1A1-208ENST00000494334 RBMXP38159 391 aaKnown RBP11.45□□□□□ -0.58
COL1A1-208ENST00000494334 PSMB10P40306 273 aa11.45□□□□□ -0.58
COL1A1-208ENST00000494334 CD200P41217 278 aa11.45□□□□□ -0.58
COL1A1-208ENST00000494334 SRP9P49458 86 aaKnown RBP11.45□□□□□ -0.58
COL1A1-208ENST00000494334 GALEQ14376 348 aa11.45□□□□□ -0.58
COL1A1-208ENST00000494334 OR8G1Q15617 311 aa11.45□□□□□ -0.58
COL1A1-208ENST00000494334 BCL2L15Q5TBC7 163 aa11.45□□□□□ -0.58
COL1A1-208ENST00000494334 FAM220AQ7Z4H9 259 aa11.45□□□□□ -0.58
COL1A1-208ENST00000494334 THAP5Q7Z6K1 395 aa11.45□□□□□ -0.58
COL1A1-208ENST00000494334 CATSPERDQ86XM0 798 aa11.45□□□□□ -0.58
COL1A1-208ENST00000494334 CSNK2A3Q8NEV1 391 aa11.45□□□□□ -0.58
COL1A1-208ENST00000494334 ALG8Q9BVK2 526 aa11.45□□□□□ -0.58
COL1A1-208ENST00000494334 PPP1R3EQ9H7J1 279 aa11.45□□□□□ -0.58
COL1A1-208ENST00000494334 GCM1Q9NP62 436 aa11.45□□□□□ -0.58
COL1A1-208ENST00000494334 FGF20Q9NP95 211 aaPredicted RBP11.45□□□□□ -0.58
COL1A1-208ENST00000494334 GPR84Q9NQS5 396 aa11.45□□□□□ -0.58
COL1A1-208ENST00000494334 INPP5EQ9NRR6 644 aa11.45□□□□□ -0.58
COL1A1-208ENST00000494334 ERVK13-1Q9NX77 482 aa11.45□□□□□ -0.58
COL1A1-208ENST00000494334 DCAF16Q9NXF7 216 aa11.45□□□□□ -0.58
COL1A1-208ENST00000494334 RRP15Q9Y3B9 282 aaKnown RBP11.45□□□□□ -0.58
COL1A1-208ENST00000494334 NOP16Q9Y3C1 178 aaKnown RBP11.45□□□□□ -0.58
COL1A1-208ENST00000494334 RHBDD3Q9Y3P4 386 aa11.45□□□□□ -0.58
COL1A1-208ENST00000494334 ACANP16112 2415 aa11.45□□□□□ -0.58
COL1A1-208ENST00000494334 MED13LQ71F56 2210 aa11.44□□□□□ -0.58
COL1A1-208ENST00000494334 A0A1B0GTI1 187 aa11.44□□□□□ -0.58
COL1A1-208ENST00000494334 J3QLW9 94 aa11.44□□□□□ -0.58
COL1A1-208ENST00000494334 ZNF19P17023 458 aa11.44□□□□□ -0.58
COL1A1-208ENST00000494334 DCKP27707 260 aa11.44□□□□□ -0.58
COL1A1-208ENST00000494334 WDR38Q5JTN6 314 aa11.44□□□□□ -0.58
COL1A1-208ENST00000494334 KRT74Q7RTS7 529 aa11.44□□□□□ -0.58
COL1A1-208ENST00000494334 BIVMQ86UB2 503 aa11.44□□□□□ -0.58
COL1A1-208ENST00000494334 COMMD2Q86X83 199 aa11.44□□□□□ -0.58
COL1A1-208ENST00000494334 KLBQ86Z14 1044 aa11.44□□□□□ -0.58
COL1A1-208ENST00000494334 PRSS35Q8N3Z0 413 aa11.44□□□□□ -0.58
COL1A1-208ENST00000494334 CELF2-AS1Q8N7Q2 184 aa11.44□□□□□ -0.58
COL1A1-208ENST00000494334 SPERTQ8NA61 448 aa11.44□□□□□ -0.58
COL1A1-208ENST00000494334 ZNF420Q8TAQ5 688 aaPredicted RBP11.44□□□□□ -0.58
COL1A1-208ENST00000494334 GGHQ92820 318 aa11.44□□□□□ -0.58
COL1A1-208ENST00000494334 FAM71F1Q96KD3 344 aaPredicted RBP11.44□□□□□ -0.58
COL1A1-208ENST00000494334 C4orf36Q96KX1 117 aa11.44□□□□□ -0.58
COL1A1-208ENST00000494334 ADAT1Q9BUB4 502 aaKnown RBP11.44□□□□□ -0.58
COL1A1-208ENST00000494334 JAM3Q9BX67 310 aa11.44□□□□□ -0.58
COL1A1-208ENST00000494334 ISG20L2Q9H9L3 353 aaKnown RBP11.44□□□□□ -0.58
COL1A1-208ENST00000494334 TMEM106BQ9NUM4 274 aa11.44□□□□□ -0.58
COL1A1-208ENST00000494334 PPP1R3CQ9UQK1 317 aa11.44□□□□□ -0.58
COL1A1-208ENST00000494334 CELSR1Q9NYQ6 3014 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 LOC100289279A0A1B0GTE1 492 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 LRP5LA4QPB2 252 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 CLDN25C9JDP6 229 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 P2RY10O00398 339 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 WNT9BO14905 357 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 PTBP3O95758 552 aaKnown RBP11.43□□□□□ -0.58
COL1A1-208ENST00000494334 LY6G6DO95868 133 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 CST4P01036 141 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 LIMS3P0CW19 117 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 LIMS4P0CW20 117 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 ATP6V1B1P15313 513 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 PMELP40967 661 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 GATA4P43694 442 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 MAP2K3P46734 347 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 ACTA2P62736 377 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 ACTG2P63267 376 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 MVKQ03426 396 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 SLC3A1Q07837 685 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 SNCBQ16143 134 aa11.43□□□□□ -0.58
COL1A1-208ENST00000494334 ODF4Q2M2E3 257 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms