RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 WDYHV1Q96HA8 205 aa9.3□□□□□ -0.92
CLCN6-208ENST00000494028 NUDT16L1Q9BRJ7 211 aaKnown RBP9.3□□□□□ -0.92
CLCN6-208ENST00000494028 CALHM2Q9HA72 323 aa9.3□□□□□ -0.92
CLCN6-208ENST00000494028 SCPEP1Q9HB40 452 aa9.3□□□□□ -0.92
CLCN6-208ENST00000494028 MYEF2Q9P2K5 600 aaKnown RBP9.3□□□□□ -0.92
CLCN6-208ENST00000494028 KLK13Q9UKR3 277 aa9.3□□□□□ -0.92
CLCN6-208ENST00000494028 RAB22AQ9UL26 194 aa9.3□□□□□ -0.92
CLCN6-208ENST00000494028 A0A0A6YYD4 124 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 A0A1B0GUH1 482 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 hCG_38984A0A1B0GV85 526 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 TMEM235A6NFC5 223 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 OR6C65A6NJZ3 312 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 DHRS7CA6NNS2 312 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 ZNF891A8MT65 544 aaPredicted RBP9.29□□□□□ -0.92
CLCN6-208ENST00000494028 ZNF587BE7ETH6 402 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 RAB27BO00194 218 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 ARPC1BO15143 372 aaKnown RBP9.29□□□□□ -0.92
CLCN6-208ENST00000494028 PEX14O75381 377 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 NDUFB6O95139 128 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 CEACAM1P13688 526 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 ACKR3P25106 362 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 AGTR1P30556 359 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 FAUP35544 74 aaKnown RBP9.29□□□□□ -0.92
CLCN6-208ENST00000494028 PLA2G5P39877 138 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 FOXG1P55316 489 aaPredicted RBP9.29□□□□□ -0.92
CLCN6-208ENST00000494028 ACTBP60709 375 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 PCBD1P61457 104 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 ACTG1P63261 375 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 ARF1P84077 181 aaKnown RBP9.29□□□□□ -0.92
CLCN6-208ENST00000494028 CAMK2BQ13554 666 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 RTP5Q14D33 572 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 RNPS1Q15287 305 aaKnown RBP9.29□□□□□ -0.92
CLCN6-208ENST00000494028 FCN2Q15485 313 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 GSG1Q2KHT4 349 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 ZNF260Q3ZCT1 412 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 ZNF627Q7L945 461 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 NUFIP2Q7Z417 695 aaKnown RBP9.29□□□□□ -0.92
CLCN6-208ENST00000494028 CDH24Q86UP0 819 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 OR2AE1Q8NHA4 323 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 PP6455Q8WZ26 134 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 ITFG2Q969R8 447 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 APH1AQ96BI3 265 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 CMBLQ96DG6 245 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 ZNF486Q96H40 463 aaPredicted RBP9.29□□□□□ -0.92
CLCN6-208ENST00000494028 REEP6Q96HR9 211 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 LPAR5Q9H1C0 372 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 DEFB127Q9H1M4 99 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 OR51J1Q9H342 316 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 NOX3Q9HBY0 568 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 B3GNT2Q9NY97 397 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 DLL3Q9NYJ7 618 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 TAS2R8Q9NYW2 309 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 ELF5Q9UKW6 265 aaPredicted RBP9.29□□□□□ -0.92
CLCN6-208ENST00000494028 TIMM10BQ9Y5J6 103 aa9.29□□□□□ -0.92
CLCN6-208ENST00000494028 WDFY3Q8IZQ1 3526 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 CFAP54Q96N23 3096 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 CACNA1GO43497 2377 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 MED12LQ86YW9 2145 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 ZNF503-AS2A6NEH8 195 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 CDC14BO60729 498 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 PRAF2O60831 178 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 CEACAM4O75871 244 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 RBBP9O75884 186 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 SCGNO76038 276 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 ALX3O95076 343 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 FARS2O95363 451 aaKnown RBP9.28□□□□□ -0.92
CLCN6-208ENST00000494028 IGHG3P01860 377 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 UBBP0CG47 229 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 AKAIN1P0CW23 69 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 GTF2F2P13984 249 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 EDN3P14138 238 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 CPN1P15169 458 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 ZNF24P17028 368 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 PSMB1P20618 241 aaKnown RBP9.28□□□□□ -0.92
CLCN6-208ENST00000494028 STOMP27105 288 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 RCVRNP35243 200 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 VEGFCP49767 419 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 MECP2P51608 486 aaKnown RBP9.28□□□□□ -0.92
CLCN6-208ENST00000494028 CCL11P51671 97 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 TNK1Q13470 666 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 SLC10A1Q14973 349 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 UBE2V2Q15819 145 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 ST3GAL2Q16842 350 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 PABPC1L2AQ5JQF8 200 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 SFRP4Q6FHJ7 346 aaPredicted RBP9.28□□□□□ -0.92
CLCN6-208ENST00000494028 RAB12Q6IQ22 244 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 GLIPR1L1Q6UWM5 242 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 Q6ZTK2 550 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 FGD2Q7Z6J4 655 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 GABRG1Q8N1C3 465 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 TMEM104Q8NE00 496 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 OR11H7Q8NGC8 314 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 OR4D10Q8NGI6 311 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 NPRL2Q8WTW4 380 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 SGK3Q96BR1 496 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 SEH1LQ96EE3 360 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 NICN1Q9BSH3 213 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 PRRG4Q9BZD6 226 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 MOV10Q9HCE1 1003 aaKnown RBP9.28□□□□□ -0.92
CLCN6-208ENST00000494028 PARPBPQ9NWS1 579 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms