RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 CDC42EP3Q9UKI2 254 aa13.59□□□□□ -0.23
SATB1-217ENST00000493952 NOP16Q9Y3C1 178 aaKnown RBP13.59□□□□□ -0.23
SATB1-217ENST00000493952 TMEM269A0A1B0GVZ9 245 aa13.58□□□□□ -0.24
SATB1-217ENST00000493952 ANKRD30BLA7E2S9 258 aa13.58□□□□□ -0.24
SATB1-217ENST00000493952 ZNF670-ZNF695F2Z2N8 137 aa13.58□□□□□ -0.24
SATB1-217ENST00000493952 PHYHO14832 338 aa13.58□□□□□ -0.24
SATB1-217ENST00000493952 ZNF205O95201 554 aa13.58□□□□□ -0.24
SATB1-217ENST00000493952 PTBP3O95758 552 aaKnown RBP13.58□□□□□ -0.24
SATB1-217ENST00000493952 RIDAP52758 137 aaKnown RBP13.58□□□□□ -0.24
SATB1-217ENST00000493952 CR1LQ2VPA4 569 aa13.58□□□□□ -0.24
SATB1-217ENST00000493952 KRTAP21-3Q3LHN1 58 aa13.58□□□□□ -0.24
SATB1-217ENST00000493952 SSX6Q7RTT6 188 aa13.58□□□□□ -0.24
SATB1-217ENST00000493952 GLCCI1Q86VQ1 547 aa13.58□□□□□ -0.24
SATB1-217ENST00000493952 LRRC28Q86X40 367 aaPredicted RBP13.58□□□□□ -0.24
SATB1-217ENST00000493952 Q8TCH9 128 aa13.58□□□□□ -0.24
SATB1-217ENST00000493952 TRUB1Q8WWH5 349 aaKnown RBP13.58□□□□□ -0.24
SATB1-217ENST00000493952 TMEM186Q96B77 213 aa13.58□□□□□ -0.24
SATB1-217ENST00000493952 TBX5Q99593 518 aa13.58□□□□□ -0.24
SATB1-217ENST00000493952 APOL4Q9BPW4 351 aa13.58□□□□□ -0.24
SATB1-217ENST00000493952 BEX2Q9BXY8 128 aa13.58□□□□□ -0.24
SATB1-217ENST00000493952 PPP1R3EQ9H7J1 279 aa13.58□□□□□ -0.24
SATB1-217ENST00000493952 UFSP2Q9NUQ7 469 aa13.58□□□□□ -0.24
SATB1-217ENST00000493952 LPAR3Q9UBY5 353 aa13.58□□□□□ -0.24
SATB1-217ENST00000493952 ACOD1A6NK06 481 aa13.57□□□□□ -0.24
SATB1-217ENST00000493952 LRRC30A6NM36 301 aa13.57□□□□□ -0.24
SATB1-217ENST00000493952 ANKRD65E5RJM6 399 aa13.57□□□□□ -0.24
SATB1-217ENST00000493952 FAM20BO75063 409 aa13.57□□□□□ -0.24
SATB1-217ENST00000493952 SRSF10O75494 262 aaKnown RBP13.57□□□□□ -0.24
SATB1-217ENST00000493952 PNPP00491 289 aa13.57□□□□□ -0.24
SATB1-217ENST00000493952 ACKR3P25106 362 aa13.57□□□□□ -0.24
SATB1-217ENST00000493952 MDH2P40926 338 aaKnown RBP13.57□□□□□ -0.24
SATB1-217ENST00000493952 MFGE8Q08431 387 aaPredicted RBP13.57□□□□□ -0.24
SATB1-217ENST00000493952 POU4F2Q12837 409 aa13.57□□□□□ -0.24
SATB1-217ENST00000493952 TMED1Q13445 227 aa13.57□□□□□ -0.24
SATB1-217ENST00000493952 ZSCAN26Q16670 478 aa13.57□□□□□ -0.24
SATB1-217ENST00000493952 ZNF829Q3KNS6 432 aaPredicted RBP13.57□□□□□ -0.24
SATB1-217ENST00000493952 TMEM155Q4W5P6 130 aa13.57□□□□□ -0.24
SATB1-217ENST00000493952 FAM201AQ5SY85 155 aa13.57□□□□□ -0.24
SATB1-217ENST00000493952 PLEKHG7Q6ZR37 379 aa13.57□□□□□ -0.24
SATB1-217ENST00000493952 SPICQ8N5J4 248 aa13.57□□□□□ -0.24
SATB1-217ENST00000493952 RFKQ969G6 155 aa13.57□□□□□ -0.24
SATB1-217ENST00000493952 ERGIC1Q969X5 290 aa13.57□□□□□ -0.24
SATB1-217ENST00000493952 PBOV1Q9GZY1 135 aa13.57□□□□□ -0.24
SATB1-217ENST00000493952 HIF1ANQ9NWT6 349 aa13.57□□□□□ -0.24
SATB1-217ENST00000493952 AASSQ9UDR5 926 aa13.57□□□□□ -0.24
SATB1-217ENST00000493952 MRM2Q9UI43 246 aaKnown RBP13.57□□□□□ -0.24
SATB1-217ENST00000493952 RHBDD3Q9Y3P4 386 aa13.57□□□□□ -0.24
SATB1-217ENST00000493952 GMPPBQ9Y5P6 360 aa13.57□□□□□ -0.24
SATB1-217ENST00000493952 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.56□□□□□ -0.24
SATB1-217ENST00000493952 A0A0U1RQV5 110 aa13.56□□□□□ -0.24
SATB1-217ENST00000493952 PLPP2O43688 288 aa13.56□□□□□ -0.24
SATB1-217ENST00000493952 ENTPD6O75354 484 aa13.56□□□□□ -0.24
SATB1-217ENST00000493952 FAM157CP0CG43 387 aa13.56□□□□□ -0.24
SATB1-217ENST00000493952 ANPEPP15144 967 aa13.56□□□□□ -0.24
SATB1-217ENST00000493952 SNRPGP62308 76 aaKnown RBP13.56□□□□□ -0.24
SATB1-217ENST00000493952 HOXA4Q00056 320 aaPredicted RBP13.56□□□□□ -0.24
SATB1-217ENST00000493952 EGR3Q06889 387 aa13.56□□□□□ -0.24
SATB1-217ENST00000493952 WDR86Q86TI4 376 aa13.56□□□□□ -0.24
SATB1-217ENST00000493952 KLBQ86Z14 1044 aa13.56□□□□□ -0.24
SATB1-217ENST00000493952 KLHL36Q8N4N3 616 aa13.56□□□□□ -0.24
SATB1-217ENST00000493952 SPERTQ8NA61 448 aa13.56□□□□□ -0.24
SATB1-217ENST00000493952 CSNK2A3Q8NEV1 391 aa13.56□□□□□ -0.24
SATB1-217ENST00000493952 OR10H4Q8NGA5 316 aa13.56□□□□□ -0.24
SATB1-217ENST00000493952 OR11L1Q8NGX0 322 aa13.56□□□□□ -0.24
SATB1-217ENST00000493952 OR8S1Q8NH09 359 aa13.56□□□□□ -0.24
SATB1-217ENST00000493952 PPP1R14AQ96A00 147 aa13.56□□□□□ -0.24
SATB1-217ENST00000493952 PAPOLGQ9BWT3 736 aaKnown RBP13.56□□□□□ -0.24
SATB1-217ENST00000493952 PATZ1Q9HBE1 687 aaKnown RBP13.56□□□□□ -0.24
SATB1-217ENST00000493952 TMEM165Q9HC07 324 aa13.56□□□□□ -0.24
SATB1-217ENST00000493952 NUFIP1Q9UHK0 495 aaKnown RBP13.56□□□□□ -0.24
SATB1-217ENST00000493952 ZNF391Q9UJN7 358 aa13.56□□□□□ -0.24
SATB1-217ENST00000493952 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.56□□□□□ -0.24
SATB1-217ENST00000493952 PCDHB10Q9UN67 800 aa13.56□□□□□ -0.24
SATB1-217ENST00000493952 PPIAL4EA0A075B759 164 aa13.55□□□□□ -0.24
SATB1-217ENST00000493952 TRAV20A0A0B4J274 112 aa13.55□□□□□ -0.24
SATB1-217ENST00000493952 A0A1W2PQL4 384 aaPredicted RBP13.55□□□□□ -0.24
SATB1-217ENST00000493952 PPIAL4DF5H284 164 aa13.55□□□□□ -0.24
SATB1-217ENST00000493952 LOC110117498-PIK3R3F6TDL0 507 aa13.55□□□□□ -0.24
SATB1-217ENST00000493952 IGLV3-1P01715 115 aa13.55□□□□□ -0.24
SATB1-217ENST00000493952 TTRP02766 147 aa13.55□□□□□ -0.24
SATB1-217ENST00000493952 GRPP07492 148 aa13.55□□□□□ -0.24
SATB1-217ENST00000493952 OR2T7P0C7T2 308 aa13.55□□□□□ -0.24
SATB1-217ENST00000493952 PPIAL4FP0DN26 164 aa13.55□□□□□ -0.24
SATB1-217ENST00000493952 IRF2P14316 349 aa13.55□□□□□ -0.24
SATB1-217ENST00000493952 GABRB1P18505 474 aa13.55□□□□□ -0.24
SATB1-217ENST00000493952 ATP6V1E1P36543 226 aa13.55□□□□□ -0.24
SATB1-217ENST00000493952 MTNR1AP48039 350 aa13.55□□□□□ -0.24
SATB1-217ENST00000493952 SEC61A1P61619 476 aaKnown RBP13.55□□□□□ -0.24
SATB1-217ENST00000493952 OCLNQ16625 522 aa13.55□□□□□ -0.24
SATB1-217ENST00000493952 SLC25A30Q5SVS4 291 aa13.55□□□□□ -0.24
SATB1-217ENST00000493952 MEDAGQ5VYS4 303 aa13.55□□□□□ -0.24
SATB1-217ENST00000493952 ZNF826PQ6ZT77 177 aa13.55□□□□□ -0.24
SATB1-217ENST00000493952 C1orf87Q8N0U7 546 aa13.55□□□□□ -0.24
SATB1-217ENST00000493952 MUC20Q8N307 709 aaPredicted RBP13.55□□□□□ -0.24
SATB1-217ENST00000493952 FTMTQ8N4E7 242 aa13.55□□□□□ -0.24
SATB1-217ENST00000493952 PLPP7Q8NBV4 271 aa13.55□□□□□ -0.24
SATB1-217ENST00000493952 C19orf18Q8NEA5 215 aa13.55□□□□□ -0.24
SATB1-217ENST00000493952 OR2T27Q8NH04 317 aa13.55□□□□□ -0.24
SATB1-217ENST00000493952 FN3KRPQ9HA64 309 aa13.55□□□□□ -0.24
SATB1-217ENST00000493952 G6PC2Q9NQR9 355 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms