RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 MGAT4DA6NG13 374 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 SEC14L6B5MCN3 397 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 ANKRD63C9JTQ0 380 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 F8VP50 259 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 H7C2Y5 167 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 CALUO43852 315 aaPredicted RBP3.25□□□□□ -1.89
GTF3A-208ENST00000493903 THY1P04216 161 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 RETP07949 1114 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 OR5H8P0DN80 308 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 IGFBP3P17936 291 aaPredicted RBP3.25□□□□□ -1.89
GTF3A-208ENST00000493903 PFN2P35080 140 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 P2RY2P41231 377 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 OR2B8PP59922 312 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 RPL18AQ02543 176 aaKnown RBP3.25□□□□□ -1.89
GTF3A-208ENST00000493903 FCN2Q15485 313 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 CEP85LQ5SZL2 805 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 FAHD1Q6P587 224 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 C12orf54Q6X4T0 127 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 ABHD13Q7L211 337 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 MRPL55Q7Z7F7 128 aaKnown RBP3.25□□□□□ -1.89
GTF3A-208ENST00000493903 RALGPS2Q86X27 583 aaPredicted RBP3.25□□□□□ -1.89
GTF3A-208ENST00000493903 FAM71AQ8IYT1 594 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 NPWQ8N729 165 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 WDR31Q8NA23 367 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 OR7G1Q8NGA0 311 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 OR5AR1Q8NGP9 310 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 OR51E1Q8TCB6 317 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 GTF2H4Q92759 462 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 GALNT14Q96FL9 552 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 BTN2A3PQ96KV6 586 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 ZNF681Q96N22 645 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 CATSPER2Q96P56 530 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 ATOH8Q96SQ7 321 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 TSNAXQ99598 290 aaKnown RBP3.25□□□□□ -1.89
GTF3A-208ENST00000493903 KRTAP2-2Q9BYT5 123 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 NDEL1Q9GZM8 345 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 PORCNQ9H237 461 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 REEP1Q9H902 201 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 MS4A12Q9NXJ0 267 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 NXT1Q9UKK6 140 aaKnown RBP3.25□□□□□ -1.89
GTF3A-208ENST00000493903 FADS3Q9Y5Q0 445 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 DLEC1Q9Y238 1755 aa3.25□□□□□ -1.89
GTF3A-208ENST00000493903 ROCK2O75116 1388 aaKnown RBP3.25□□□□□ -1.89
GTF3A-208ENST00000493903 FAM166BA8MTA8 275 aa3.24□□□□□ -1.89
GTF3A-208ENST00000493903 DFFAO00273 331 aa3.24□□□□□ -1.89
GTF3A-208ENST00000493903 GABRPO00591 440 aa3.24□□□□□ -1.89
GTF3A-208ENST00000493903 GCGP01275 180 aa3.24□□□□□ -1.89
GTF3A-208ENST00000493903 ZNF883P0CG24 379 aa3.24□□□□□ -1.89
GTF3A-208ENST00000493903 PRLHRP49683 370 aa3.24□□□□□ -1.89
GTF3A-208ENST00000493903 VSX2P58304 361 aaPredicted RBP3.24□□□□□ -1.89
GTF3A-208ENST00000493903 PRPS1P60891 318 aa3.24□□□□□ -1.89
GTF3A-208ENST00000493903 RPL31P62899 125 aaKnown RBP3.24□□□□□ -1.89
GTF3A-208ENST00000493903 ST3GAL4Q11206 333 aa3.24□□□□□ -1.89
GTF3A-208ENST00000493903 MAD2L1BPQ15013 274 aaPredicted RBP3.24□□□□□ -1.89
GTF3A-208ENST00000493903 TAL2Q16559 108 aa3.24□□□□□ -1.89
GTF3A-208ENST00000493903 NDUFAF6Q330K2 333 aa3.24□□□□□ -1.89
GTF3A-208ENST00000493903 CD300LGQ6UXG3 332 aa3.24□□□□□ -1.89
GTF3A-208ENST00000493903 RNF165Q6ZSG1 346 aa3.24□□□□□ -1.89
GTF3A-208ENST00000493903 BHLHA15Q7RTS1 189 aaPredicted RBP3.24□□□□□ -1.89
GTF3A-208ENST00000493903 SSX6Q7RTT6 188 aa3.24□□□□□ -1.89
GTF3A-208ENST00000493903 SELENOHQ8IZQ5 122 aaKnown RBP3.24□□□□□ -1.89
GTF3A-208ENST00000493903 DAW1Q8N136 415 aa3.24□□□□□ -1.89
GTF3A-208ENST00000493903 C14orf178Q8N769 122 aaPredicted RBP3.24□□□□□ -1.89
GTF3A-208ENST00000493903 OR10W1Q8NGF6 305 aa3.24□□□□□ -1.89
GTF3A-208ENST00000493903 OR10Z1Q8NGY1 313 aa3.24□□□□□ -1.89
GTF3A-208ENST00000493903 OR51A7Q8NH64 312 aa3.24□□□□□ -1.89
GTF3A-208ENST00000493903 OR4S2Q8NH73 311 aa3.24□□□□□ -1.89
GTF3A-208ENST00000493903 MCOLN3Q8TDD5 553 aa3.24□□□□□ -1.89
GTF3A-208ENST00000493903 LRRC45Q96CN5 670 aa3.24□□□□□ -1.89
GTF3A-208ENST00000493903 ZNF396Q96N95 335 aaPredicted RBP3.24□□□□□ -1.89
GTF3A-208ENST00000493903 TIMM29Q9BSF4 260 aa3.24□□□□□ -1.89
GTF3A-208ENST00000493903 MED10Q9BTT4 135 aa3.24□□□□□ -1.89
GTF3A-208ENST00000493903 ANGPTL4Q9BY76 406 aa3.24□□□□□ -1.89
GTF3A-208ENST00000493903 LINC00597Q9H2U6 94 aa3.24□□□□□ -1.89
GTF3A-208ENST00000493903 C1orf198Q9H425 327 aa3.24□□□□□ -1.89
GTF3A-208ENST00000493903 SLC17A7Q9P2U7 560 aa3.24□□□□□ -1.89
GTF3A-208ENST00000493903 MTRF1LQ9UGC7 380 aaKnown RBP3.24□□□□□ -1.89
GTF3A-208ENST00000493903 CES1P1Q9UKY3 287 aa3.24□□□□□ -1.89
GTF3A-208ENST00000493903 SMG6Q86US8 1419 aaKnown RBP3.24□□□□□ -1.89
GTF3A-208ENST00000493903 TJP1Q07157 1748 aa3.24□□□□□ -1.89
GTF3A-208ENST00000493903 NRXN2Q9P2S2 1712 aa3.24□□□□□ -1.89
GTF3A-208ENST00000493903 ADAMTSL1Q8N6G6 1762 aa3.23□□□□□ -1.89
GTF3A-208ENST00000493903 IGKV3D-15A0A087WSY6 115 aa3.23□□□□□ -1.89
GTF3A-208ENST00000493903 IGLV1-36A0A0B4J1U3 117 aa3.23□□□□□ -1.89
GTF3A-208ENST00000493903 A0A0B4J2E0 115 aa3.23□□□□□ -1.89
GTF3A-208ENST00000493903 A0A1B0GTI1 187 aa3.23□□□□□ -1.89
GTF3A-208ENST00000493903 EPOPA6NHQ4 379 aa3.23□□□□□ -1.89
GTF3A-208ENST00000493903 RAD51BO15315 384 aa3.23□□□□□ -1.89
GTF3A-208ENST00000493903 CDC40O60508 579 aaKnown RBP eCLIP3.23□□□□□ -1.89
GTF3A-208ENST00000493903 SLC16A7O60669 478 aa3.23□□□□□ -1.89
GTF3A-208ENST00000493903 NDUFS6O75380 124 aaKnown RBP3.23□□□□□ -1.89
GTF3A-208ENST00000493903 MMP23AO75900 390 aa3.23□□□□□ -1.89
GTF3A-208ENST00000493903 GLAP06280 429 aa3.23□□□□□ -1.89
GTF3A-208ENST00000493903 GIG44P09565 113 aaPredicted RBP3.23□□□□□ -1.89
GTF3A-208ENST00000493903 PGA4P0DJD7 388 aa3.23□□□□□ -1.89
GTF3A-208ENST00000493903 PGA3P0DJD8 388 aa3.23□□□□□ -1.89
GTF3A-208ENST00000493903 PGA5P0DJD9 388 aa3.23□□□□□ -1.89
GTF3A-208ENST00000493903 ZNF3P17036 446 aa3.23□□□□□ -1.89
GTF3A-208ENST00000493903 GABRG2P18507 467 aa3.23□□□□□ -1.89
GTF3A-208ENST00000493903 ARL2P36404 184 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms