RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 RBM48Q5RL73 367 aaKnown RBP15.22■□□□□ 0.03
PDLIM7-208ENST00000493815 TMPRSS11AQ6ZMR5 421 aa15.22■□□□□ 0.03
PDLIM7-208ENST00000493815 RAB1BQ9H0U4 201 aa15.22■□□□□ 0.03
PDLIM7-208ENST00000493815 OPA3Q9H6K4 179 aa15.22■□□□□ 0.03
PDLIM7-208ENST00000493815 A0A1B0GTI1 187 aa15.21■□□□□ 0.03
PDLIM7-208ENST00000493815 SSX4O60224 188 aa15.21■□□□□ 0.03
PDLIM7-208ENST00000493815 NCR1O76036 304 aa15.21■□□□□ 0.03
PDLIM7-208ENST00000493815 IGLV3-1P01715 115 aa15.21■□□□□ 0.03
PDLIM7-208ENST00000493815 HPXP02790 462 aa15.21■□□□□ 0.03
PDLIM7-208ENST00000493815 PAX1P15863 534 aa15.21■□□□□ 0.03
PDLIM7-208ENST00000493815 CFL1P23528 166 aaKnown RBP15.21■□□□□ 0.03
PDLIM7-208ENST00000493815 GBX2P52951 348 aaPredicted RBP15.21■□□□□ 0.03
PDLIM7-208ENST00000493815 MYCBPQ99417 103 aaPredicted RBP15.21■□□□□ 0.03
PDLIM7-208ENST00000493815 SLC30A2Q9BRI3 323 aa15.21■□□□□ 0.03
PDLIM7-208ENST00000493815 CCDC90BQ9GZT6 254 aa15.21■□□□□ 0.03
PDLIM7-208ENST00000493815 CYSLTR2Q9NS75 346 aa15.21■□□□□ 0.03
PDLIM7-208ENST00000493815 TMEM100Q9NV29 134 aa15.21■□□□□ 0.03
PDLIM7-208ENST00000493815 RHBDD3Q9Y3P4 386 aa15.21■□□□□ 0.03
PDLIM7-208ENST00000493815 SIRT4Q9Y6E7 314 aaPredicted RBP15.21■□□□□ 0.03
PDLIM7-208ENST00000493815 OTOGQ6ZRI0 2925 aa15.2■□□□□ 0.02
PDLIM7-208ENST00000493815 A6NIN4 97 aa15.2■□□□□ 0.02
PDLIM7-208ENST00000493815 LYNX1G3V0Z9 82 aa15.2■□□□□ 0.02
PDLIM7-208ENST00000493815 MLNRO43193 412 aa15.2■□□□□ 0.02
PDLIM7-208ENST00000493815 TPD52L2O43399 206 aaKnown RBP15.2■□□□□ 0.02
PDLIM7-208ENST00000493815 MT-ND2P03891 347 aa15.2■□□□□ 0.02
PDLIM7-208ENST00000493815 LYNX1P0DP58 116 aa15.2■□□□□ 0.02
PDLIM7-208ENST00000493815 EEF1B2P24534 225 aaKnown RBP15.2■□□□□ 0.02
PDLIM7-208ENST00000493815 LIPAP38571 399 aa15.2■□□□□ 0.02
PDLIM7-208ENST00000493815 EFNA4P52798 201 aa15.2■□□□□ 0.02
PDLIM7-208ENST00000493815 ALKBH1Q13686 389 aaKnown RBP15.2■□□□□ 0.02
PDLIM7-208ENST00000493815 OR8B8Q15620 311 aa15.2■□□□□ 0.02
PDLIM7-208ENST00000493815 FDX2Q6P4F2 183 aa15.2■□□□□ 0.02
PDLIM7-208ENST00000493815 ZFP41Q8N8Y5 198 aa15.2■□□□□ 0.02
PDLIM7-208ENST00000493815 ZNF485Q8NCK3 441 aa15.2■□□□□ 0.02
PDLIM7-208ENST00000493815 OR52N1Q8NH53 320 aa15.2■□□□□ 0.02
PDLIM7-208ENST00000493815 ELMOD3Q96FG2 381 aa15.2■□□□□ 0.02
PDLIM7-208ENST00000493815 BABAM2Q9NXR7 383 aa15.2■□□□□ 0.02
PDLIM7-208ENST00000493815 PRRC2AP48634 2157 aaKnown RBP15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 F5H5P2 479 aa15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 MYL12BO14950 172 aa15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 RGS10O43665 173 aa15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 LMX1BO60663 402 aa15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 F12P00748 615 aaPredicted RBP15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 DMRTC1Q5HYR2 192 aa15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 NANOGP1Q8N7R0 232 aa15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 OR13G1Q8NGZ3 307 aa15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 OR10AC1Q8NH08 325 aa15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 FOXC2Q99958 501 aa15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 PDCD1LG2Q9BQ51 273 aa15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 CDCA4Q9BXL8 241 aa15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 TREM2Q9NZC2 230 aa15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 CGGBP1Q9UFW8 167 aaPredicted RBP15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 ZNF391Q9UJN7 358 aa15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 FBXO9Q9UK97 447 aaPredicted RBP15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 ERGIC3Q9Y282 383 aa15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 LRRC42Q9Y546 428 aa15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 MYO9AB2RTY4 2548 aa15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 PNMA8CA0A1B0GUJ8 204 aa15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 LOC107986453A0A1B0GWG9 222 aa15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 OR4C45A6NMZ5 311 aa15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 ERCC1P07992 297 aaPredicted RBP15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 FAHP16930 419 aa15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 ZMAT1Q5H9K5 638 aa15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 Q5PR19 223 aa15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 KRTAP1-3Q8IUG1 177 aa15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 ZNF525Q8N782 197 aa15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 OR5M11Q96RB7 305 aa15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 PAPOLGQ9BWT3 736 aaKnown RBP15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 DECR2Q9NUI1 292 aa15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 MRPL15Q9P015 296 aaKnown RBP15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 ZDHHC8Q9ULC8 765 aa15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 PIGLQ9Y2B2 252 aa15.19■□□□□ 0.02
PDLIM7-208ENST00000493815 TRBV2A0A0J9YWF9 115 aa15.18■□□□□ 0.02
PDLIM7-208ENST00000493815 ANKRD30BLA7E2S9 258 aa15.18■□□□□ 0.02
PDLIM7-208ENST00000493815 SYT7O43581 403 aa15.18■□□□□ 0.02
PDLIM7-208ENST00000493815 CDC14BO60729 498 aa15.18■□□□□ 0.02
PDLIM7-208ENST00000493815 DHRS3O75911 302 aa15.18■□□□□ 0.02
PDLIM7-208ENST00000493815 ZFPL1O95159 310 aa15.18■□□□□ 0.02
PDLIM7-208ENST00000493815 DDOSTP39656 456 aa15.18■□□□□ 0.02
PDLIM7-208ENST00000493815 MAP2K4P45985 399 aa15.18■□□□□ 0.02
PDLIM7-208ENST00000493815 CCR9P51686 369 aa15.18■□□□□ 0.02
PDLIM7-208ENST00000493815 TNFAIP6P98066 277 aaPredicted RBP15.18■□□□□ 0.02
PDLIM7-208ENST00000493815 IRF3Q14653 427 aa15.18■□□□□ 0.02
PDLIM7-208ENST00000493815 CARTPTQ16568 116 aa15.18■□□□□ 0.02
PDLIM7-208ENST00000493815 TGIF2LYQ8IUE0 185 aa15.18■□□□□ 0.02
PDLIM7-208ENST00000493815 LRRC75A-AS1Q8N1F1 130 aa15.18■□□□□ 0.02
PDLIM7-208ENST00000493815 ZNF676Q8N7Q3 588 aa15.18■□□□□ 0.02
PDLIM7-208ENST00000493815 SEMA6DQ8NFY4 1073 aa15.18■□□□□ 0.02
PDLIM7-208ENST00000493815 OR51A4Q8NGJ6 313 aa15.18■□□□□ 0.02
PDLIM7-208ENST00000493815 NEU4Q8WWR8 484 aaPredicted RBP15.18■□□□□ 0.02
PDLIM7-208ENST00000493815 ADAT1Q9BUB4 502 aaKnown RBP15.18■□□□□ 0.02
PDLIM7-208ENST00000493815 BLOC1S6Q9UL45 172 aa15.18■□□□□ 0.02
PDLIM7-208ENST00000493815 A0A1B0GVI7 797 aa15.17■□□□□ 0.02
PDLIM7-208ENST00000493815 UBCP0CG48 685 aaKnown RBP15.17■□□□□ 0.02
PDLIM7-208ENST00000493815 DAOP14920 347 aa15.17■□□□□ 0.02
PDLIM7-208ENST00000493815 MAP2K3P46734 347 aa15.17■□□□□ 0.02
PDLIM7-208ENST00000493815 TGM4P49221 684 aa15.17■□□□□ 0.02
PDLIM7-208ENST00000493815 CDH15P55291 814 aa15.17■□□□□ 0.02
PDLIM7-208ENST00000493815 WNT4P56705 351 aa15.17■□□□□ 0.02
PDLIM7-208ENST00000493815 OR8G1Q15617 311 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms