RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 HOXC5Q00444 222 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 TNFRSF17Q02223 184 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 C2orf80Q0P641 193 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 FUT7Q11130 342 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 ILKQ13418 452 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 EIF2B1Q14232 305 aaKnown RBP2.43□□□□□ -2.02
CD46-217ENST00000493796 NCF4Q15080 339 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 TOMM34Q15785 309 aaPredicted RBP2.43□□□□□ -2.02
CD46-217ENST00000493796 SYPL1Q16563 259 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 SFT2D3Q587I9 215 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 LGSNQ5TDP6 509 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 ETFRF1Q6IPR1 90 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 H3F3CQ6NXT2 135 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 SLC48A1Q6P1K1 146 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 CALHM3Q86XJ0 350 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 SLC22A9Q8IVM8 553 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 PEX5LQ8IYB4 626 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 CADM2Q8N3J6 435 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 ZCCHC7Q8N3Z6 543 aaKnown RBP2.43□□□□□ -2.02
CD46-217ENST00000493796 RPRMLQ8N4K4 120 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 ANKFN1Q8N957 763 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 FDCSPQ8NFU4 85 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 GPR32P1Q8NGA4 272 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 PNPT1Q8TCS8 783 aaKnown RBP2.43□□□□□ -2.02
CD46-217ENST00000493796 RNF138Q8WVD3 245 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 RAB8BQ92930 207 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 MAL2Q969L2 176 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 DNAJA3Q96EY1 480 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 FOPNLQ96NB1 174 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 AIF1LQ9BQI0 150 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 CCDC77Q9BR77 488 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 EFCAB11Q9BUY7 163 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 DDA1Q9BW61 102 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 CAPS2Q9BXY5 557 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 FAM107BQ9H098 131 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 ILKAPQ9H0C8 392 aaPredicted RBP2.43□□□□□ -2.02
CD46-217ENST00000493796 NXF5Q9H1B4 397 aaKnown RBP2.43□□□□□ -2.02
CD46-217ENST00000493796 CLMPQ9H6B4 373 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 CXorf21Q9HAI6 301 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 C1orf109Q9NX04 203 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 TAS2R7Q9NYW3 318 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 CD300AQ9UGN4 299 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 FARSAQ9Y285 508 aaKnown RBP2.43□□□□□ -2.02
CD46-217ENST00000493796 ZANQ9Y493 2812 aa2.43□□□□□ -2.02
CD46-217ENST00000493796 INTS1Q8N201 2190 aaKnown RBP2.43□□□□□ -2.02
CD46-217ENST00000493796 CUBNO60494 3623 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 ANK3Q12955 4377 aaKnown RBP2.42□□□□□ -2.02
CD46-217ENST00000493796 SETXQ7Z333 2677 aaKnown RBP2.42□□□□□ -2.02
CD46-217ENST00000493796 TRBV7-9A0A0J9YWB2 115 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 PRORSD1PA6NEY8 169 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 ARGFXA6NJG6 315 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 H0YC42 278 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 K7ENP7 123 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 WWP2O00308 870 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 HMGN4O00479 90 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 SCAMP2O15127 329 aaKnown RBP2.42□□□□□ -2.02
CD46-217ENST00000493796 ZNF861PO60384 105 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 TBX19O60806 448 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 CTNSO60931 367 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 UGT2B11O75310 529 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 GPR75O95800 540 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 OPN1MWP04001 364 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 OPN1MW2P0DN77 364 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 OPN1MW3P0DN78 364 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 CCL3P10147 92 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 NCK1P16333 377 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 PTNP21246 168 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 OTX2P32243 289 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 ACVR1BP36896 505 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 SERPINB5P36952 375 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 HSD17B2P37059 387 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 RBMXP38159 391 aaKnown RBP2.42□□□□□ -2.02
CD46-217ENST00000493796 ACAA2P42765 397 aaKnown RBP2.42□□□□□ -2.02
CD46-217ENST00000493796 SSR2P43308 183 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 MRPL19P49406 292 aaKnown RBP2.42□□□□□ -2.02
CD46-217ENST00000493796 DUSP3P51452 185 aaPredicted RBP2.42□□□□□ -2.02
CD46-217ENST00000493796 XKP51811 444 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 EMP2P54851 167 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 UCNP55089 124 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 MTTPP55157 894 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 RAB38P57729 211 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 FBXW4P57775 412 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 MTPNP58546 118 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 GMFBP60983 142 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 NCALDP61601 193 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 ERVK-8P63133 956 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 DCDP81605 110 aaKnown RBP2.42□□□□□ -2.02
CD46-217ENST00000493796 DMTNQ08495 405 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 PSG7Q13046 419 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 IL18R1Q13478 541 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 RCAN2Q14206 197 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 EBPQ15125 230 aaKnown RBP2.42□□□□□ -2.02
CD46-217ENST00000493796 INAQ16352 499 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 PRR4Q16378 134 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 DEFB109BQ30KR1 87 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 ZNF791Q3KP31 576 aaPredicted RBP2.42□□□□□ -2.02
CD46-217ENST00000493796 NADK2Q4G0N4 442 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 AGKQ53H12 422 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 AP1ARQ63HQ0 302 aa2.42□□□□□ -2.02
CD46-217ENST00000493796 CBLN3Q6UW01 205 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms