RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 PCNX1Q96RV3 2341 aa12.25□□□□□ -0.45
PDZRN3-210ENST00000492909 A0A1W2PR80 420 aa12.24□□□□□ -0.45
PDZRN3-210ENST00000492909 CENPXA8MT69 81 aa12.24□□□□□ -0.45
PDZRN3-210ENST00000492909 A8MXE2 369 aa12.24□□□□□ -0.45
PDZRN3-210ENST00000492909 MAGEB1P43366 347 aa12.24□□□□□ -0.45
PDZRN3-210ENST00000492909 MADCAM1Q13477 382 aa12.24□□□□□ -0.45
PDZRN3-210ENST00000492909 HSD17B12Q53GQ0 312 aa12.24□□□□□ -0.45
PDZRN3-210ENST00000492909 DUSP18Q8NEJ0 188 aa12.24□□□□□ -0.45
PDZRN3-210ENST00000492909 OR51E1Q8TCB6 317 aa12.24□□□□□ -0.45
PDZRN3-210ENST00000492909 NOX4Q9NPH5 578 aa12.24□□□□□ -0.45
PDZRN3-210ENST00000492909 OBP2BQ9NPH6 170 aa12.24□□□□□ -0.45
PDZRN3-210ENST00000492909 RBFOX1Q9NWB1 397 aaKnown RBP12.24□□□□□ -0.45
PDZRN3-210ENST00000492909 ZNF319Q9P2F9 582 aa12.24□□□□□ -0.45
PDZRN3-210ENST00000492909 LOC100509620A0A075B734 347 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 A0A0B4J293 547 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 A0A0U1RQV5 110 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 A0A1B0GVI7 797 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 A8MV72 311 aaPredicted RBP12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 CCL21O00585 134 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 SYT7O43581 403 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 RAF1P04049 648 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 LCATP04180 440 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 SERPINA5P05154 406 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 CD2P06729 351 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 FAM157BP0CG42 384 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 PSMB1P20618 241 aaKnown RBP12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 IL32P24001 234 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 HGFACQ04756 655 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 PLET1Q6UQ28 207 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 STAC2Q6ZMT1 411 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 COMMD2Q86X83 199 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 ZNF584Q8IVC4 421 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 SLC7A5P1Q8MH63 180 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 OR13C3Q8NGS6 347 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 ASB5Q8WWX0 329 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 KCTD12Q96CX2 325 aaKnown RBP12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 OR10A2Q9H208 303 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 RELNP78509 3460 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 TRBV5-7A0A0A0MS05 114 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 TRAV1-2A0A0B4J238 106 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 C5orf49A4QMS7 147 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 OR5H1A6NKK0 313 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 FAM25AB3EWG3 89 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 FAM25CB3EWG5 89 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 FAM25GB3EWG6 89 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 PIN1P1O15428 100 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 SRMP19623 302 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 CCNOP22674 350 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 GNLYP22749 145 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 S100A1P23297 94 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 ANOS1P23352 680 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 APLNRP35414 380 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 GFOD2Q3B7J2 385 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 TPRA1Q86W33 373 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 WDR31Q8NA23 367 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 MS4A3Q96HJ5 214 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 POM121L2Q96KW2 1035 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 DMRTB1Q96MA1 342 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 ZNF75AQ96N20 296 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 GPR84Q9NQS5 396 aa12.23□□□□□ -0.45
PDZRN3-210ENST00000492909 A0A1B0GTI1 187 aa12.22□□□□□ -0.45
PDZRN3-210ENST00000492909 LYRM1O43325 122 aa12.22□□□□□ -0.45
PDZRN3-210ENST00000492909 PLA2G2AP14555 144 aa12.22□□□□□ -0.45
PDZRN3-210ENST00000492909 ZNF14P17017 642 aaPredicted RBP12.22□□□□□ -0.45
PDZRN3-210ENST00000492909 ELK1P19419 428 aa12.22□□□□□ -0.45
PDZRN3-210ENST00000492909 CDK10Q15131 360 aa12.22□□□□□ -0.45
PDZRN3-210ENST00000492909 SNAI3Q3KNW1 292 aa12.22□□□□□ -0.45
PDZRN3-210ENST00000492909 IDNKQ5T6J7 187 aa12.22□□□□□ -0.45
PDZRN3-210ENST00000492909 NR2C2APQ86WQ0 139 aa12.22□□□□□ -0.45
PDZRN3-210ENST00000492909 LIX1LQ8IVB5 337 aa12.22□□□□□ -0.45
PDZRN3-210ENST00000492909 RELL2Q8NC24 303 aaPredicted RBP12.22□□□□□ -0.45
PDZRN3-210ENST00000492909 ORAI1Q96D31 301 aa12.22□□□□□ -0.45
PDZRN3-210ENST00000492909 RNF170Q96K19 258 aa12.22□□□□□ -0.45
PDZRN3-210ENST00000492909 C1QTNF5Q9BXJ0 243 aa12.22□□□□□ -0.45
PDZRN3-210ENST00000492909 SLITRK2Q9H156 845 aa12.22□□□□□ -0.45
PDZRN3-210ENST00000492909 ELOVL5Q9NYP7 299 aa12.22□□□□□ -0.45
PDZRN3-210ENST00000492909 JKAMPQ9P055 326 aa12.22□□□□□ -0.45
PDZRN3-210ENST00000492909 EXTL2Q9UBQ6 330 aa12.22□□□□□ -0.45
PDZRN3-210ENST00000492909 AMDHD2Q9Y303 409 aa12.22□□□□□ -0.45
PDZRN3-210ENST00000492909 C5orf63A6NC05 138 aa12.21□□□□□ -0.45
PDZRN3-210ENST00000492909 IGLV3-1P01715 115 aa12.21□□□□□ -0.45
PDZRN3-210ENST00000492909 CCL2P13500 99 aa12.21□□□□□ -0.45
PDZRN3-210ENST00000492909 CBR1P16152 277 aa12.21□□□□□ -0.45
PDZRN3-210ENST00000492909 CCL1P22362 96 aa12.21□□□□□ -0.45
PDZRN3-210ENST00000492909 THBS2P35442 1172 aa12.21□□□□□ -0.45
PDZRN3-210ENST00000492909 IDH3GP51553 393 aaPredicted RBP12.21□□□□□ -0.45
PDZRN3-210ENST00000492909 MRPS15P82914 257 aaKnown RBP12.21□□□□□ -0.45
PDZRN3-210ENST00000492909 TBC1D28Q2M2D7 210 aa12.21□□□□□ -0.45
PDZRN3-210ENST00000492909 TIMM23BQ5SRD1 257 aa12.21□□□□□ -0.45
PDZRN3-210ENST00000492909 DOK3Q7L591 496 aa12.21□□□□□ -0.45
PDZRN3-210ENST00000492909 LRRC28Q86X40 367 aaPredicted RBP12.21□□□□□ -0.45
PDZRN3-210ENST00000492909 SLC30A7Q8NEW0 376 aa12.21□□□□□ -0.45
PDZRN3-210ENST00000492909 FAM71F1Q96KD3 344 aaPredicted RBP12.21□□□□□ -0.45
PDZRN3-210ENST00000492909 TCF7L1Q9HCS4 588 aa12.21□□□□□ -0.45
PDZRN3-210ENST00000492909 CYSLTR2Q9NS75 346 aa12.21□□□□□ -0.45
PDZRN3-210ENST00000492909 ZNF275Q9NSD4 429 aaPredicted RBP12.21□□□□□ -0.45
PDZRN3-210ENST00000492909 ZNF391Q9UJN7 358 aa12.21□□□□□ -0.45
PDZRN3-210ENST00000492909 ESPL1Q14674 2120 aa12.21□□□□□ -0.46
PDZRN3-210ENST00000492909 FAM240BA0A1B0GVZ2 78 aa12.2□□□□□ -0.46
PDZRN3-210ENST00000492909 IGKV3-15P01624 115 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms