RNA–Protein interactions for RNA: ENST00000492235.1

TREX1-204, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3

Gene TREX1, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-204ENST00000492235 SF3A3Q12874 501 aaKnown RBP eCLIP10.24□□□□□ -0.77
TREX1-204ENST00000492235 SEC23BQ15437 767 aa10.24□□□□□ -0.77
TREX1-204ENST00000492235 PCK2Q16822 640 aa10.24□□□□□ -0.77
TREX1-204ENST00000492235 RFX4Q33E94 735 aa10.24□□□□□ -0.77
TREX1-204ENST00000492235 WDR38Q5JTN6 314 aa10.24□□□□□ -0.77
TREX1-204ENST00000492235 GLYATL3Q5SZD4 288 aa10.24□□□□□ -0.77
TREX1-204ENST00000492235 C8orf82Q6P1X6 216 aaPredicted RBP10.24□□□□□ -0.77
TREX1-204ENST00000492235 SMARCD3Q6STE5 483 aa10.24□□□□□ -0.77
TREX1-204ENST00000492235 METAP1DQ6UB28 335 aaPredicted RBP10.24□□□□□ -0.77
TREX1-204ENST00000492235 C1orf122Q6ZSJ8 110 aa10.24□□□□□ -0.77
TREX1-204ENST00000492235 REC114Q7Z4M0 266 aa10.24□□□□□ -0.77
TREX1-204ENST00000492235 CMTM4Q8IZR5 234 aa10.24□□□□□ -0.77
TREX1-204ENST00000492235 FAM216BQ8N7L0 139 aa10.24□□□□□ -0.77
TREX1-204ENST00000492235 SPERTQ8NA61 448 aa10.24□□□□□ -0.77
TREX1-204ENST00000492235 LY6G5BQ8NDX9 201 aa10.24□□□□□ -0.77
TREX1-204ENST00000492235 OR4K13Q8NH42 304 aa10.24□□□□□ -0.77
TREX1-204ENST00000492235 OR5R1Q8NH85 324 aa10.24□□□□□ -0.77
TREX1-204ENST00000492235 LRRC29Q8WV35 223 aa10.24□□□□□ -0.77
TREX1-204ENST00000492235 SPTSSAQ969W0 71 aa10.24□□□□□ -0.77
TREX1-204ENST00000492235 RCN3Q96D15 328 aa10.24□□□□□ -0.77
TREX1-204ENST00000492235 TOR3AQ9H497 397 aa10.24□□□□□ -0.77
TREX1-204ENST00000492235 NDE1Q9NXR1 346 aa10.24□□□□□ -0.77
TREX1-204ENST00000492235 ENPP4Q9Y6X5 453 aa10.24□□□□□ -0.77
TREX1-204ENST00000492235 TRBV4-1A0A0J9YWV2 114 aa10.23□□□□□ -0.77
TREX1-204ENST00000492235 A0A1W2PRQ8 180 aa10.23□□□□□ -0.77
TREX1-204ENST00000492235 GPR37O15354 613 aa10.23□□□□□ -0.77
TREX1-204ENST00000492235 HIST1H1CP16403 213 aaKnown RBP10.23□□□□□ -0.77
TREX1-204ENST00000492235 SAA4P35542 130 aa10.23□□□□□ -0.77
TREX1-204ENST00000492235 RPS27P42677 84 aaKnown RBP10.23□□□□□ -0.77
TREX1-204ENST00000492235 MNAT1P51948 309 aa10.23□□□□□ -0.77
TREX1-204ENST00000492235 LIPEQ05469 1076 aa10.23□□□□□ -0.77
TREX1-204ENST00000492235 IKZF1Q13422 519 aa10.23□□□□□ -0.77
TREX1-204ENST00000492235 DGCR6Q14129 220 aa10.23□□□□□ -0.77
TREX1-204ENST00000492235 MICBQ29980 383 aa10.23□□□□□ -0.77
TREX1-204ENST00000492235 ZBTB46Q86UZ6 589 aa10.23□□□□□ -0.77
TREX1-204ENST00000492235 Q8N7P7 452 aa10.23□□□□□ -0.77
TREX1-204ENST00000492235 OR56B2PQ8NGI1 322 aa10.23□□□□□ -0.77
TREX1-204ENST00000492235 FANK1Q8TC84 345 aa10.23□□□□□ -0.77
TREX1-204ENST00000492235 SEH1LQ96EE3 360 aa10.23□□□□□ -0.77
TREX1-204ENST00000492235 C14orf119Q9NWQ9 140 aa10.23□□□□□ -0.77
TREX1-204ENST00000492235 MRPL22Q9NWU5 206 aaKnown RBP10.23□□□□□ -0.77
TREX1-204ENST00000492235 N6AMT1Q9Y5N5 214 aa10.23□□□□□ -0.77
TREX1-204ENST00000492235 OR6C68A6NDL8 312 aa10.22□□□□□ -0.77
TREX1-204ENST00000492235 ACOT8O14734 319 aa10.22□□□□□ -0.77
TREX1-204ENST00000492235 NDUFB3O43676 98 aa10.22□□□□□ -0.77
TREX1-204ENST00000492235 MUC1P15941 1255 aaPredicted RBP10.22□□□□□ -0.77
TREX1-204ENST00000492235 ZNF823P16415 610 aa10.22□□□□□ -0.77
TREX1-204ENST00000492235 NUDT2P50583 147 aa10.22□□□□□ -0.77
TREX1-204ENST00000492235 EFNB2P52799 333 aa10.22□□□□□ -0.77
TREX1-204ENST00000492235 MZT1Q08AG7 82 aa10.22□□□□□ -0.77
TREX1-204ENST00000492235 LY6EQ16553 131 aa10.22□□□□□ -0.77
TREX1-204ENST00000492235 SPATS1Q496A3 300 aa10.22□□□□□ -0.77
TREX1-204ENST00000492235 OXLD1Q5BKU9 147 aa10.22□□□□□ -0.77
TREX1-204ENST00000492235 SLC36A1Q7Z2H8 476 aa10.22□□□□□ -0.77
TREX1-204ENST00000492235 WDR86Q86TI4 376 aa10.22□□□□□ -0.77
TREX1-204ENST00000492235 C11orf53Q8IXP5 236 aa10.22□□□□□ -0.77
TREX1-204ENST00000492235 SLC15A3Q8IY34 581 aa10.22□□□□□ -0.77
TREX1-204ENST00000492235 LYG1Q8N1E2 194 aa10.22□□□□□ -0.77
TREX1-204ENST00000492235 KLHDC1Q8N7A1 406 aa10.22□□□□□ -0.77
TREX1-204ENST00000492235 CCDC197Q8NCU1 140 aa10.22□□□□□ -0.77
TREX1-204ENST00000492235 SDR9C7Q8NEX9 313 aa10.22□□□□□ -0.77
TREX1-204ENST00000492235 OR8S1Q8NH09 359 aa10.22□□□□□ -0.77
TREX1-204ENST00000492235 OR52J3Q8NH60 311 aa10.22□□□□□ -0.77
TREX1-204ENST00000492235 PPP1R35Q8TAP8 253 aa10.22□□□□□ -0.77
TREX1-204ENST00000492235 H1FXQ92522 213 aaKnown RBP10.22□□□□□ -0.77
TREX1-204ENST00000492235 ITPKCQ96DU7 683 aa10.22□□□□□ -0.77
TREX1-204ENST00000492235 OR52D1Q9H346 318 aa10.22□□□□□ -0.77
TREX1-204ENST00000492235 SPAG4Q9NPE6 437 aa10.22□□□□□ -0.77
TREX1-204ENST00000492235 KRCC1Q9NPI7 259 aaPredicted RBP10.22□□□□□ -0.77
TREX1-204ENST00000492235 ABCD2Q9UBJ2 740 aa10.22□□□□□ -0.77
TREX1-204ENST00000492235 PRPF19Q9UMS4 504 aaKnown RBP10.22□□□□□ -0.77
TREX1-204ENST00000492235 FAM32AQ9Y421 112 aaKnown RBP10.22□□□□□ -0.77
TREX1-204ENST00000492235 H3BUX3 64 aa10.21□□□□□ -0.77
TREX1-204ENST00000492235 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.21□□□□□ -0.77
TREX1-204ENST00000492235 ARPC3O15145 178 aa10.21□□□□□ -0.77
TREX1-204ENST00000492235 DIRAS1O95057 198 aa10.21□□□□□ -0.77
TREX1-204ENST00000492235 SLC2A1P11166 492 aa10.21□□□□□ -0.77
TREX1-204ENST00000492235 SELLP14151 372 aa10.21□□□□□ -0.77
TREX1-204ENST00000492235 NCK1P16333 377 aa10.21□□□□□ -0.77
TREX1-204ENST00000492235 NOS3P29474 1203 aa10.21□□□□□ -0.77
TREX1-204ENST00000492235 SLC6A6P31641 620 aa10.21□□□□□ -0.77
TREX1-204ENST00000492235 GRK5P34947 590 aa10.21□□□□□ -0.77
TREX1-204ENST00000492235 PRKXP51817 358 aa10.21□□□□□ -0.77
TREX1-204ENST00000492235 LOXL3P58215 753 aa10.21□□□□□ -0.77
TREX1-204ENST00000492235 GMFBP60983 142 aa10.21□□□□□ -0.77
TREX1-204ENST00000492235 CSNK2BP67870 215 aa10.21□□□□□ -0.77
TREX1-204ENST00000492235 KRT72Q14CN4 511 aa10.21□□□□□ -0.77
TREX1-204ENST00000492235 DRAM2Q6UX65 266 aa10.21□□□□□ -0.77
TREX1-204ENST00000492235 WDR82Q6UXN9 313 aa10.21□□□□□ -0.77
TREX1-204ENST00000492235 DPY19L4Q7Z388 723 aa10.21□□□□□ -0.77
TREX1-204ENST00000492235 OR5T2Q8NGG2 359 aa10.21□□□□□ -0.77
TREX1-204ENST00000492235 CFHR4Q92496 578 aa10.21□□□□□ -0.77
TREX1-204ENST00000492235 TNFRSF14Q92956 283 aa10.21□□□□□ -0.77
TREX1-204ENST00000492235 PPP1R14AQ96A00 147 aa10.21□□□□□ -0.77
TREX1-204ENST00000492235 FAM162AQ96A26 154 aa10.21□□□□□ -0.77
TREX1-204ENST00000492235 DCTN5Q9BTE1 182 aa10.21□□□□□ -0.77
TREX1-204ENST00000492235 IFT27Q9BW83 186 aa10.21□□□□□ -0.77
TREX1-204ENST00000492235 RNPEPL1Q9HAU8 725 aa10.21□□□□□ -0.77
TREX1-204ENST00000492235 NDUFAF4Q9P032 175 aa10.21□□□□□ -0.77
TREX1-204ENST00000492235 TAGLN3Q9UI15 199 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms