RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 OR52I1Q8NGK6 324 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 OR52N1Q8NH53 320 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 OR2V1Q8NHB1 315 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 CXorf40AQ8TE69 158 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 SETD7Q8WTS6 366 aaKnown RBP4.12□□□□□ -1.75
RTN4-215ENST00000491592 SLC38A5Q8WUX1 472 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 GTF3AQ92664 365 aaKnown RBP4.12□□□□□ -1.75
RTN4-215ENST00000491592 ERGIC1Q969X5 290 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 APH1AQ96BI3 265 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 TESCQ96BS2 214 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 PDXPQ96GD0 296 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 TIMD4Q96H15 378 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 UHRF2Q96PU4 802 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 STACQ99469 402 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 NIPSNAP1Q9BPW8 284 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 MARVELD1Q9BSK0 173 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 SPNS1Q9H2V7 528 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 C5orf66Q9H5L9 145 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 PLEKHA1Q9HB21 404 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 LRTM1Q9HBL6 345 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 ISYNA1Q9NPH2 558 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 SLC17A5Q9NRA2 495 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 CTPS2Q9NRF8 586 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 RBFOX1Q9NWB1 397 aaKnown RBP4.12□□□□□ -1.75
RTN4-215ENST00000491592 IMPAD1Q9NX62 359 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 THUMPD1Q9NXG2 353 aaKnown RBP4.12□□□□□ -1.75
RTN4-215ENST00000491592 GPR83Q9NYM4 423 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 SLC25A37Q9NYZ2 338 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 B3GAT1Q9P2W7 334 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 GALPQ9UBC7 116 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 IL36RNQ9UBH0 155 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 MUTYHQ9UIF7 546 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 ZNF225Q9UK10 706 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 FZR1Q9UM11 496 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 MRPS28Q9Y2Q9 187 aaKnown RBP4.12□□□□□ -1.75
RTN4-215ENST00000491592 TMED3Q9Y3Q3 217 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 HSPB11Q9Y547 144 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 ARL5AQ9Y689 179 aa4.12□□□□□ -1.75
RTN4-215ENST00000491592 MCM3APO60318 1980 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 COL4A4P53420 1690 aaPredicted RBP4.11□□□□□ -1.75
RTN4-215ENST00000491592 THSD7AQ9UPZ6 1657 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 NPIPA5A0A0B4J1W7 369 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 IGHV4-28A0A0C4DH34 117 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 A0A1B0GV72 72 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 A0A1B0GVI7 797 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 A0A1W2PRG6 482 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 SLC5A10A0PJK1 596 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 A6NIZ1 184 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 NKX6-3A6NJ46 265 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 HIDE1A8MVS5 230 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 C9J4A7 227 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 H0Y980 276 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 CDC7O00311 574 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 SULT1C2O00338 296 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 DCTN6O00399 190 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 TAPBPO15533 448 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 SGCEO43556 437 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 RCBTB2O95199 551 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 ZNF682O95780 498 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 SLC25A27O95847 323 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 PTHP01270 115 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 IGLV3-25P01717 112 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 P04436 131 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 KLK1P06870 262 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 RHOCP08134 193 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 MELTFP08582 738 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 CSF3P09919 207 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 TSPAN19P0C672 248 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 PRSS56P0CW18 603 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 ANXA3P12429 323 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 HLA-GP17693 338 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 GPX2P18283 190 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 EIF2S3P41091 472 aaKnown RBP4.11□□□□□ -1.75
RTN4-215ENST00000491592 MAGEA5P43359 124 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 AMTP48728 403 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 CYB561P49447 251 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 TTPAP49638 278 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 IDH3GP51553 393 aaPredicted RBP4.11□□□□□ -1.75
RTN4-215ENST00000491592 CD81P60033 236 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 SNRPGP62308 76 aaKnown RBP4.11□□□□□ -1.75
RTN4-215ENST00000491592 ST3GAL3Q11203 375 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 MLLT11Q13015 90 aaPredicted RBP4.11□□□□□ -1.75
RTN4-215ENST00000491592 EIF4EBP2Q13542 120 aaPredicted RBP4.11□□□□□ -1.75
RTN4-215ENST00000491592 GTF2H2Q13888 395 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 C1DQ13901 141 aaKnown RBP4.11□□□□□ -1.75
RTN4-215ENST00000491592 ARL6IP1Q15041 203 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 PTGES3Q15185 160 aaKnown RBP4.11□□□□□ -1.75
RTN4-215ENST00000491592 SLC9A3R2Q15599 337 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 OR1C1Q15619 314 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 DUOXA1Q1HG43 343 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 RFTN2Q52LD8 501 aaPredicted RBP4.11□□□□□ -1.75
RTN4-215ENST00000491592 PYDC2Q56P42 97 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 SPIN3Q5JUX0 258 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 SPANXN4Q5MJ08 99 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 TRIQKQ629K1 86 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 SAXO2Q658L1 398 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 LAMTOR1Q6IAA8 161 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 GTF2H2CQ6P1K8 395 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 DNM1P34Q6PK57 102 aa4.11□□□□□ -1.75
RTN4-215ENST00000491592 SCIMPQ6UWF3 145 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms