RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 ANOS1P23352 680 aa16.91■□□□□ 0.3
CLIP2-208ENST00000491075 NOS3P29474 1203 aa16.91■□□□□ 0.3
CLIP2-208ENST00000491075 EFNB2P52799 333 aa16.91■□□□□ 0.3
CLIP2-208ENST00000491075 ACSM1Q08AH1 577 aa16.91■□□□□ 0.3
CLIP2-208ENST00000491075 KLRD1Q13241 179 aa16.91■□□□□ 0.3
CLIP2-208ENST00000491075 LNX2Q8N448 690 aa16.91■□□□□ 0.3
CLIP2-208ENST00000491075 FAM216BQ8N7L0 139 aa16.91■□□□□ 0.3
CLIP2-208ENST00000491075 Q8N7P7 452 aa16.91■□□□□ 0.3
CLIP2-208ENST00000491075 OR4C15Q8NGM1 316 aa16.91■□□□□ 0.3
CLIP2-208ENST00000491075 C8orf46Q8TAG6 207 aa16.91■□□□□ 0.3
CLIP2-208ENST00000491075 CFHR4Q92496 578 aa16.91■□□□□ 0.3
CLIP2-208ENST00000491075 FAM162AQ96A26 154 aa16.91■□□□□ 0.3
CLIP2-208ENST00000491075 C12orf43Q96C57 262 aaKnown RBP16.91■□□□□ 0.3
CLIP2-208ENST00000491075 DCTN5Q9BTE1 182 aa16.91■□□□□ 0.3
CLIP2-208ENST00000491075 FN3KQ9H479 309 aa16.91■□□□□ 0.3
CLIP2-208ENST00000491075 CAPN7Q9Y6W3 813 aa16.91■□□□□ 0.3
CLIP2-208ENST00000491075 A0A1W2PRD5 423 aa16.9■□□□□ 0.3
CLIP2-208ENST00000491075 A0A1W2PRF3 423 aa16.9■□□□□ 0.3
CLIP2-208ENST00000491075 A0A1W2PRM7 423 aa16.9■□□□□ 0.3
CLIP2-208ENST00000491075 OR6C68A6NDL8 312 aa16.9■□□□□ 0.3
CLIP2-208ENST00000491075 ANKRD30BLA7E2S9 258 aa16.9■□□□□ 0.3
CLIP2-208ENST00000491075 DDOSTP39656 456 aa16.9■□□□□ 0.3
CLIP2-208ENST00000491075 LRRC10Q5BKY1 277 aa16.9■□□□□ 0.3
CLIP2-208ENST00000491075 NCR3LG1Q68D85 454 aa16.9■□□□□ 0.3
CLIP2-208ENST00000491075 SDR9C7Q8NEX9 313 aa16.9■□□□□ 0.3
CLIP2-208ENST00000491075 OR4C13Q8NGP0 309 aa16.9■□□□□ 0.3
CLIP2-208ENST00000491075 MRAPQ8TCY5 172 aa16.9■□□□□ 0.3
CLIP2-208ENST00000491075 DHRS1Q96LJ7 313 aa16.9■□□□□ 0.3
CLIP2-208ENST00000491075 IFT27Q9BW83 186 aa16.9■□□□□ 0.3
CLIP2-208ENST00000491075 NSRP1Q9H0G5 558 aaKnown RBP16.9■□□□□ 0.3
CLIP2-208ENST00000491075 DNAJB11Q9UBS4 358 aa16.9■□□□□ 0.3
CLIP2-208ENST00000491075 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.89■□□□□ 0.29
CLIP2-208ENST00000491075 NME4O00746 187 aa16.89■□□□□ 0.29
CLIP2-208ENST00000491075 ACOT8O14734 319 aa16.89■□□□□ 0.29
CLIP2-208ENST00000491075 XRCC2O43543 280 aa16.89■□□□□ 0.29
CLIP2-208ENST00000491075 IDH3BO43837 385 aa16.89■□□□□ 0.29
CLIP2-208ENST00000491075 TIPRLO75663 272 aa16.89■□□□□ 0.29
CLIP2-208ENST00000491075 KIR2DS4P43632 304 aa16.89■□□□□ 0.29
CLIP2-208ENST00000491075 UBE2E1P51965 193 aa16.89■□□□□ 0.29
CLIP2-208ENST00000491075 ELF3P78545 371 aaPredicted RBP16.89■□□□□ 0.29
CLIP2-208ENST00000491075 PRB3Q04118 309 aaPredicted RBP16.89■□□□□ 0.29
CLIP2-208ENST00000491075 WDR82Q6UXN9 313 aa16.89■□□□□ 0.29
CLIP2-208ENST00000491075 C1orf122Q6ZSJ8 110 aa16.89■□□□□ 0.29
CLIP2-208ENST00000491075 DPY19L4Q7Z388 723 aa16.89■□□□□ 0.29
CLIP2-208ENST00000491075 WDR86Q86TI4 376 aa16.89■□□□□ 0.29
CLIP2-208ENST00000491075 C11orf53Q8IXP5 236 aa16.89■□□□□ 0.29
CLIP2-208ENST00000491075 BEND2Q8NDZ0 799 aa16.89■□□□□ 0.29
CLIP2-208ENST00000491075 TNFRSF14Q92956 283 aa16.89■□□□□ 0.29
CLIP2-208ENST00000491075 FUZQ9BT04 418 aa16.89■□□□□ 0.29
CLIP2-208ENST00000491075 COPS4Q9BT78 406 aa16.89■□□□□ 0.29
CLIP2-208ENST00000491075 ADA2Q9NZK5 511 aa16.89■□□□□ 0.29
CLIP2-208ENST00000491075 KMT2CQ8NEZ4 4911 aaKnown RBP16.88■□□□□ 0.29
CLIP2-208ENST00000491075 H3BUX3 64 aa16.88■□□□□ 0.29
CLIP2-208ENST00000491075 NAA10P41227 235 aaPredicted RBP16.88■□□□□ 0.29
CLIP2-208ENST00000491075 RPS27P42677 84 aaKnown RBP16.88■□□□□ 0.29
CLIP2-208ENST00000491075 GSK3BP49841 420 aa16.88■□□□□ 0.29
CLIP2-208ENST00000491075 SLC7A2P52569 658 aa16.88■□□□□ 0.29
CLIP2-208ENST00000491075 DLX1P56177 255 aa16.88■□□□□ 0.29
CLIP2-208ENST00000491075 LOXL3P58215 753 aa16.88■□□□□ 0.29
CLIP2-208ENST00000491075 IKZF1Q13422 519 aa16.88■□□□□ 0.29
CLIP2-208ENST00000491075 PNKDQ8N490 385 aa16.88■□□□□ 0.29
CLIP2-208ENST00000491075 KLHDC1Q8N7A1 406 aa16.88■□□□□ 0.29
CLIP2-208ENST00000491075 C11orf44Q8N8P7 122 aa16.88■□□□□ 0.29
CLIP2-208ENST00000491075 OR1M1Q8NGA1 313 aa16.88■□□□□ 0.29
CLIP2-208ENST00000491075 OR52J3Q8NH60 311 aa16.88■□□□□ 0.29
CLIP2-208ENST00000491075 OR2T6Q8NHC8 308 aa16.88■□□□□ 0.29
CLIP2-208ENST00000491075 H1FXQ92522 213 aaKnown RBP16.88■□□□□ 0.29
CLIP2-208ENST00000491075 SPSB4Q96A44 273 aa16.88■□□□□ 0.29
CLIP2-208ENST00000491075 FAM234AQ9H0X4 552 aa16.88■□□□□ 0.29
CLIP2-208ENST00000491075 DNTTIP1Q9H147 329 aa16.88■□□□□ 0.29
CLIP2-208ENST00000491075 RANBP3Q9H6Z4 567 aaPredicted RBP16.88■□□□□ 0.29
CLIP2-208ENST00000491075 FOXJ3Q9UPW0 622 aa16.88■□□□□ 0.29
CLIP2-208ENST00000491075 SIGLEC9Q9Y336 463 aa16.88■□□□□ 0.29
CLIP2-208ENST00000491075 M0R1W7 72 aa16.87■□□□□ 0.29
CLIP2-208ENST00000491075 SLC22A2O15244 555 aa16.87■□□□□ 0.29
CLIP2-208ENST00000491075 XPNPEP2O43895 674 aa16.87■□□□□ 0.29
CLIP2-208ENST00000491075 TGM4P49221 684 aa16.87■□□□□ 0.29
CLIP2-208ENST00000491075 CSNK2BP67870 215 aa16.87■□□□□ 0.29
CLIP2-208ENST00000491075 KRT72Q14CN4 511 aa16.87■□□□□ 0.29
CLIP2-208ENST00000491075 STUMQ69YW2 141 aa16.87■□□□□ 0.29
CLIP2-208ENST00000491075 ZDHHC21Q8IVQ6 265 aa16.87■□□□□ 0.29
CLIP2-208ENST00000491075 PPP1R35Q8TAP8 253 aa16.87■□□□□ 0.29
CLIP2-208ENST00000491075 C7orf34Q96L11 122 aa16.87■□□□□ 0.29
CLIP2-208ENST00000491075 KCNJ15Q99712 375 aa16.87■□□□□ 0.29
CLIP2-208ENST00000491075 METTL8Q9H825 291 aaKnown RBP16.87■□□□□ 0.29
CLIP2-208ENST00000491075 RAB18Q9NP72 206 aa16.87■□□□□ 0.29
CLIP2-208ENST00000491075 MAB21L2Q9Y586 359 aa16.87■□□□□ 0.29
CLIP2-208ENST00000491075 NKX6-3A6NJ46 265 aa16.86■□□□□ 0.29
CLIP2-208ENST00000491075 DIRAS1O95057 198 aa16.86■□□□□ 0.29
CLIP2-208ENST00000491075 SLC2A1P11166 492 aa16.86■□□□□ 0.29
CLIP2-208ENST00000491075 NCK1P16333 377 aa16.86■□□□□ 0.29
CLIP2-208ENST00000491075 PRKXP51817 358 aa16.86■□□□□ 0.29
CLIP2-208ENST00000491075 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.86■□□□□ 0.29
CLIP2-208ENST00000491075 TAF13Q15543 124 aa16.86■□□□□ 0.29
CLIP2-208ENST00000491075 ATPAF1Q5TC12 328 aaPredicted RBP16.86■□□□□ 0.29
CLIP2-208ENST00000491075 PGBD2Q6P3X8 592 aa16.86■□□□□ 0.29
CLIP2-208ENST00000491075 DCXRQ7Z4W1 244 aa16.86■□□□□ 0.29
CLIP2-208ENST00000491075 PROKR2Q8NFJ6 384 aa16.86■□□□□ 0.29
CLIP2-208ENST00000491075 RP9Q8TA86 221 aaKnown RBP16.86■□□□□ 0.29
CLIP2-208ENST00000491075 SEH1LQ96EE3 360 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms