RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 TMEM204Q9BSN7 226 aa9.42□□□□□ -0.9
VARS2-210ENST00000490699 REPIN1Q9BWE0 567 aaKnown RBP9.42□□□□□ -0.9
VARS2-210ENST00000490699 CLEC4MQ9H2X3 399 aaPredicted RBP9.42□□□□□ -0.9
VARS2-210ENST00000490699 UBTD1Q9HAC8 227 aa9.42□□□□□ -0.9
VARS2-210ENST00000490699 DYNLRB1Q9NP97 96 aa9.42□□□□□ -0.9
VARS2-210ENST00000490699 EXOSC4Q9NPD3 245 aaKnown RBP9.42□□□□□ -0.9
VARS2-210ENST00000490699 NDUFB11Q9NX14 153 aa9.42□□□□□ -0.9
VARS2-210ENST00000490699 SSR3Q9UNL2 185 aa9.42□□□□□ -0.9
VARS2-210ENST00000490699 GSTK1Q9Y2Q3 226 aa9.42□□□□□ -0.9
VARS2-210ENST00000490699 ZNF816-ZNF321PA0A0X1KG74 233 aa9.41□□□□□ -0.9
VARS2-210ENST00000490699 hCG_38984A0A1B0GV85 526 aa9.41□□□□□ -0.9
VARS2-210ENST00000490699 CD300LBA8K4G0 201 aa9.41□□□□□ -0.9
VARS2-210ENST00000490699 B9A039 149 aa9.41□□□□□ -0.9
VARS2-210ENST00000490699 HS3ST1O14792 307 aa9.41□□□□□ -0.9
VARS2-210ENST00000490699 MAGEB3O15480 346 aa9.41□□□□□ -0.9
VARS2-210ENST00000490699 LALBAP00709 142 aa9.41□□□□□ -0.9
VARS2-210ENST00000490699 ZNF250P15622 560 aa9.41□□□□□ -0.9
VARS2-210ENST00000490699 CD36P16671 472 aa9.41□□□□□ -0.9
VARS2-210ENST00000490699 CCL1P22362 96 aa9.41□□□□□ -0.9
VARS2-210ENST00000490699 GALP22466 123 aa9.41□□□□□ -0.9
VARS2-210ENST00000490699 RANBP1P43487 201 aa9.41□□□□□ -0.9
VARS2-210ENST00000490699 EVX1P49640 407 aa9.41□□□□□ -0.9
VARS2-210ENST00000490699 FAM3AP98173 230 aa9.41□□□□□ -0.9
VARS2-210ENST00000490699 TLE4Q04727 773 aa9.41□□□□□ -0.9
VARS2-210ENST00000490699 HLXQ14774 488 aaPredicted RBP9.41□□□□□ -0.9
VARS2-210ENST00000490699 CNN3Q15417 329 aaKnown RBP9.41□□□□□ -0.9
VARS2-210ENST00000490699 MUC15Q8N387 334 aa9.41□□□□□ -0.9
VARS2-210ENST00000490699 OR56B2PQ8NGI1 322 aa9.41□□□□□ -0.9
VARS2-210ENST00000490699 OR5D14Q8NGL3 314 aa9.41□□□□□ -0.9
VARS2-210ENST00000490699 OR8S1Q8NH09 359 aa9.41□□□□□ -0.9
VARS2-210ENST00000490699 RPS4Y2Q8TD47 263 aa9.41□□□□□ -0.9
VARS2-210ENST00000490699 TMEM171Q8WVE6 324 aa9.41□□□□□ -0.9
VARS2-210ENST00000490699 PP6455Q8WZ26 134 aa9.41□□□□□ -0.9
VARS2-210ENST00000490699 PHYHIPQ92561 330 aa9.41□□□□□ -0.9
VARS2-210ENST00000490699 TMEM203Q969S6 136 aa9.41□□□□□ -0.9
VARS2-210ENST00000490699 HAVCR1Q96D42 359 aa9.41□□□□□ -0.9
VARS2-210ENST00000490699 SYT3Q9BQG1 590 aa9.41□□□□□ -0.9
VARS2-210ENST00000490699 PAPOLGQ9BWT3 736 aaKnown RBP9.41□□□□□ -0.9
VARS2-210ENST00000490699 PURGQ9UJV8 347 aaKnown RBP9.41□□□□□ -0.9
VARS2-210ENST00000490699 FZR1Q9UM11 496 aa9.41□□□□□ -0.9
VARS2-210ENST00000490699 STUB1Q9UNE7 303 aa9.41□□□□□ -0.9
VARS2-210ENST00000490699 PIGLQ9Y2B2 252 aa9.41□□□□□ -0.9
VARS2-210ENST00000490699 IQCF6A8MYZ5 107 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 E7EQL1 145 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 H3BSH0 61 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 M0R233 179 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 CTAG2O75638 210 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 IGHV3-13P01766 116 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 RAF1P04049 648 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 KITLGP21583 273 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 MYL9P24844 172 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 SOX2P48431 317 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 GP2P55259 537 aaKnown RBP9.4□□□□□ -0.9
VARS2-210ENST00000490699 ERVS71-1P61550 626 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 OR8B8Q15620 311 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 ADIPOQQ15848 244 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 CLVS2Q5SYC1 327 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 OR2T2Q6IF00 324 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 C20orf204Q6ZNR8 217 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 SERPINA12Q8IW75 414 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 RDH10Q8IZV5 341 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 OR5AS1Q8N127 324 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 SPERTQ8NA61 448 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 BHLHE23Q8NDY6 225 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 OR13G1Q8NGZ3 307 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 TMEM106AQ96A25 262 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 C14orf79Q96F83 325 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 PGLYRP3Q96LB9 341 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 PSMG3-AS1Q96PY0 264 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 DIRC2Q96SL1 478 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 MS4A5Q9H3V2 200 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 TCF7L1Q9HCS4 588 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 ZNF275Q9NSD4 429 aaPredicted RBP9.4□□□□□ -0.9
VARS2-210ENST00000490699 TMEM100Q9NV29 134 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 MRPL15Q9P015 296 aaKnown RBP9.4□□□□□ -0.9
VARS2-210ENST00000490699 TAAR3PQ9P1P4 343 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 SLC7A11Q9UPY5 501 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 MPC1Q9Y5U8 109 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 PMF1-BGLAPU3KQ54 211 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 V9GYS6 101 aa9.4□□□□□ -0.9
VARS2-210ENST00000490699 BAHCC1Q9P281 2608 aa9.39□□□□□ -0.91
VARS2-210ENST00000490699 LOC100506127A0A0U1RQW1 187 aa9.39□□□□□ -0.91
VARS2-210ENST00000490699 CCDC160A6NGH7 325 aa9.39□□□□□ -0.91
VARS2-210ENST00000490699 ANKRD61A6NGH8 418 aa9.39□□□□□ -0.91
VARS2-210ENST00000490699 SIAH2O43255 324 aa9.39□□□□□ -0.91
VARS2-210ENST00000490699 TPD52L2O43399 206 aaKnown RBP9.39□□□□□ -0.91
VARS2-210ENST00000490699 AIREO43918 545 aa9.39□□□□□ -0.91
VARS2-210ENST00000490699 PLAUP00749 431 aa9.39□□□□□ -0.91
VARS2-210ENST00000490699 IGLV3-1P01715 115 aa9.39□□□□□ -0.91
VARS2-210ENST00000490699 FAHP16930 419 aa9.39□□□□□ -0.91
VARS2-210ENST00000490699 RAB3AP20336 220 aa9.39□□□□□ -0.91
VARS2-210ENST00000490699 MPV17P39210 176 aa9.39□□□□□ -0.91
VARS2-210ENST00000490699 RPS25P62851 125 aaKnown RBP9.39□□□□□ -0.91
VARS2-210ENST00000490699 PSG7Q13046 419 aa9.39□□□□□ -0.91
VARS2-210ENST00000490699 OR8G1Q15617 311 aa9.39□□□□□ -0.91
VARS2-210ENST00000490699 EFNB3Q15768 340 aa9.39□□□□□ -0.91
VARS2-210ENST00000490699 ACSM3Q53FZ2 586 aa9.39□□□□□ -0.91
VARS2-210ENST00000490699 HSD17B12Q53GQ0 312 aa9.39□□□□□ -0.91
VARS2-210ENST00000490699 PLCXD3Q63HM9 321 aa9.39□□□□□ -0.91
VARS2-210ENST00000490699 GDPGP1Q6ZNW5 385 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms