RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 COMMD3-BMI1R4GMX3 469 aa12.78□□□□□ -0.36
COL2A1-207ENST00000490609 GGT3PA6NGU5 568 aa12.77□□□□□ -0.37
COL2A1-207ENST00000490609 CLUP10909 449 aa12.77□□□□□ -0.37
COL2A1-207ENST00000490609 RRM2P31350 389 aa12.77□□□□□ -0.37
COL2A1-207ENST00000490609 CSNK2BP67870 215 aa12.77□□□□□ -0.37
COL2A1-207ENST00000490609 FAM3AP98173 230 aa12.77□□□□□ -0.37
COL2A1-207ENST00000490609 KRT72Q14CN4 511 aa12.77□□□□□ -0.37
COL2A1-207ENST00000490609 KCNJ8Q15842 424 aa12.77□□□□□ -0.37
COL2A1-207ENST00000490609 CDONQ4KMG0 1287 aa12.77□□□□□ -0.37
COL2A1-207ENST00000490609 LINC01590Q5TEZ4 76 aa12.77□□□□□ -0.37
COL2A1-207ENST00000490609 WDR82Q6UXN9 313 aa12.77□□□□□ -0.37
COL2A1-207ENST00000490609 FAM216BQ8N7L0 139 aa12.77□□□□□ -0.37
COL2A1-207ENST00000490609 OR9Q1Q8NGQ5 310 aa12.77□□□□□ -0.37
COL2A1-207ENST00000490609 TBC1D15Q8TC07 691 aa12.77□□□□□ -0.37
COL2A1-207ENST00000490609 GNPDA2Q8TDQ7 276 aa12.77□□□□□ -0.37
COL2A1-207ENST00000490609 SPTSSAQ969W0 71 aa12.77□□□□□ -0.37
COL2A1-207ENST00000490609 SLAMF6Q96DU3 332 aa12.77□□□□□ -0.37
COL2A1-207ENST00000490609 KCNJ15Q99712 375 aa12.77□□□□□ -0.37
COL2A1-207ENST00000490609 FGF23Q9GZV9 251 aaPredicted RBP12.77□□□□□ -0.37
COL2A1-207ENST00000490609 SPAG4Q9NPE6 437 aa12.77□□□□□ -0.37
COL2A1-207ENST00000490609 IL1RAPQ9NPH3 570 aa12.77□□□□□ -0.37
COL2A1-207ENST00000490609 IL20Q9NYY1 176 aa12.77□□□□□ -0.37
COL2A1-207ENST00000490609 NBEAL2Q6ZNJ1 2754 aa12.77□□□□□ -0.37
COL2A1-207ENST00000490609 RNASEK-C17orf49H0YIS7 233 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 M0QZ24 198 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 NDUFAB1O14561 156 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 ACOT8O14734 319 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 GASTP01350 101 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 TFF1P04155 84 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 GYPBP06028 91 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 HSD17B1P14061 328 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 SELLP14151 372 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 ZNF823P16415 610 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 TGM4P49221 684 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 SMIM11AP58511 58 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 C11orf91Q3C1V1 193 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 WDR38Q5JTN6 314 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 TEX30Q5JUR7 227 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 SLC16A9Q7RTY1 509 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 C1QL4Q86Z23 238 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 ZDHHC21Q8IVQ6 265 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 LNX2Q8N448 690 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 OR1M1Q8NGA1 313 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 OR9Q2Q8NGE9 314 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 OR4C15Q8NGM1 316 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 OR4Q3Q8NH05 313 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 AJUBAQ96IF1 538 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 AMELYQ99218 206 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 PKP2Q99959 881 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 TLNRD1Q9H1K6 362 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 KRCC1Q9NPI7 259 aaPredicted RBP12.76□□□□□ -0.37
COL2A1-207ENST00000490609 ZNRD1Q9P1U0 126 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 LYVE1Q9Y5Y7 322 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 KPTNQ9Y664 436 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 CDH10Q9Y6N8 788 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 DSCAML1Q8TD84 2053 aa12.76□□□□□ -0.37
COL2A1-207ENST00000490609 SLC22A31A6NKX4 558 aa12.75□□□□□ -0.37
COL2A1-207ENST00000490609 ZNF593O00488 134 aaPredicted RBP12.75□□□□□ -0.37
COL2A1-207ENST00000490609 ECDO95905 644 aaPredicted RBP12.75□□□□□ -0.37
COL2A1-207ENST00000490609 HIST2H2BDQ6DRA6 164 aa12.75□□□□□ -0.37
COL2A1-207ENST00000490609 METAP1DQ6UB28 335 aaPredicted RBP12.75□□□□□ -0.37
COL2A1-207ENST00000490609 PNKDQ8N490 385 aa12.75□□□□□ -0.37
COL2A1-207ENST00000490609 SPERTQ8NA61 448 aa12.75□□□□□ -0.37
COL2A1-207ENST00000490609 KMT2CQ8NEZ4 4911 aaKnown RBP12.75□□□□□ -0.37
COL2A1-207ENST00000490609 PROKR2Q8NFJ6 384 aa12.75□□□□□ -0.37
COL2A1-207ENST00000490609 LRRC29Q8WV35 223 aa12.75□□□□□ -0.37
COL2A1-207ENST00000490609 ST8SIA4Q92187 359 aa12.75□□□□□ -0.37
COL2A1-207ENST00000490609 RNPEPL1Q9HAU8 725 aa12.75□□□□□ -0.37
COL2A1-207ENST00000490609 TRIM36Q9NQ86 728 aa12.75□□□□□ -0.37
COL2A1-207ENST00000490609 ARGLU1Q9NWB6 273 aaPredicted RBP12.75□□□□□ -0.37
COL2A1-207ENST00000490609 N6AMT1Q9Y5N5 214 aa12.75□□□□□ -0.37
COL2A1-207ENST00000490609 hCG_38984A0A1B0GV85 526 aa12.74□□□□□ -0.37
COL2A1-207ENST00000490609 DHRS12A0PJE2 317 aa12.74□□□□□ -0.37
COL2A1-207ENST00000490609 A6NLC8 198 aa12.74□□□□□ -0.37
COL2A1-207ENST00000490609 TIMM23O14925 209 aa12.74□□□□□ -0.37
COL2A1-207ENST00000490609 ARPC2O15144 300 aa12.74□□□□□ -0.37
COL2A1-207ENST00000490609 TSPAN9O75954 239 aa12.74□□□□□ -0.37
COL2A1-207ENST00000490609 MUC1P15941 1255 aaPredicted RBP12.74□□□□□ -0.37
COL2A1-207ENST00000490609 PRDX6P30041 224 aa12.74□□□□□ -0.37
COL2A1-207ENST00000490609 ENTPD1P49961 510 aa12.74□□□□□ -0.37
COL2A1-207ENST00000490609 PPP1R8Q12972 351 aaKnown RBP12.74□□□□□ -0.37
COL2A1-207ENST00000490609 KLRD1Q13241 179 aa12.74□□□□□ -0.37
COL2A1-207ENST00000490609 CRMP1Q14194 572 aa12.74□□□□□ -0.37
COL2A1-207ENST00000490609 ATPAF1Q5TC12 328 aaPredicted RBP12.74□□□□□ -0.37
COL2A1-207ENST00000490609 HCP5Q6MZN7 132 aa12.74□□□□□ -0.37
COL2A1-207ENST00000490609 OR5T2Q8NGG2 359 aa12.74□□□□□ -0.37
COL2A1-207ENST00000490609 OR2T4Q8NH00 348 aa12.74□□□□□ -0.37
COL2A1-207ENST00000490609 C17orf50Q8WW18 174 aa12.74□□□□□ -0.37
COL2A1-207ENST00000490609 COPS4Q9BT78 406 aa12.74□□□□□ -0.37
COL2A1-207ENST00000490609 NSRP1Q9H0G5 558 aaKnown RBP12.74□□□□□ -0.37
COL2A1-207ENST00000490609 WDR13Q9H1Z4 485 aa12.74□□□□□ -0.37
COL2A1-207ENST00000490609 SIRT7Q9NRC8 400 aa12.74□□□□□ -0.37
COL2A1-207ENST00000490609 CENPMQ9NSP4 180 aa12.74□□□□□ -0.37
COL2A1-207ENST00000490609 VNN3Q9NY84 501 aa12.74□□□□□ -0.37
COL2A1-207ENST00000490609 NOP16Q9Y3C1 178 aaKnown RBP12.74□□□□□ -0.37
COL2A1-207ENST00000490609 RHBDD3Q9Y3P4 386 aa12.74□□□□□ -0.37
COL2A1-207ENST00000490609 hCG_1807616A0A1W2PRN6 198 aa12.73□□□□□ -0.37
COL2A1-207ENST00000490609 FABP3P05413 133 aa12.73□□□□□ -0.37
COL2A1-207ENST00000490609 SPARCP09486 303 aa12.73□□□□□ -0.37
COL2A1-207ENST00000490609 SPI1P17947 270 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms