RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 METTL17Q9H7H0 456 aaPredicted RBP15.18■□□□□ 0.02
COL9A3-214ENST00000490398 OPN4Q9UHM6 478 aa15.18■□□□□ 0.02
COL9A3-214ENST00000490398 PCDHB10Q9UN67 800 aa15.18■□□□□ 0.02
COL9A3-214ENST00000490398 RHBDD3Q9Y3P4 386 aa15.18■□□□□ 0.02
COL9A3-214ENST00000490398 EI24O14681 340 aa15.17■□□□□ 0.02
COL9A3-214ENST00000490398 APOL3O95236 402 aa15.17■□□□□ 0.02
COL9A3-214ENST00000490398 APOC1P02654 83 aa15.17■□□□□ 0.02
COL9A3-214ENST00000490398 ALPLP05186 524 aa15.17■□□□□ 0.02
COL9A3-214ENST00000490398 GRPP07492 148 aa15.17■□□□□ 0.02
COL9A3-214ENST00000490398 WNT2P09544 360 aa15.17■□□□□ 0.02
COL9A3-214ENST00000490398 CD80P33681 288 aa15.17■□□□□ 0.02
COL9A3-214ENST00000490398 MFGE8Q08431 387 aaPredicted RBP15.17■□□□□ 0.02
COL9A3-214ENST00000490398 PLEKHG7Q6ZR37 379 aa15.17■□□□□ 0.02
COL9A3-214ENST00000490398 C11orf53Q8IXP5 236 aa15.17■□□□□ 0.02
COL9A3-214ENST00000490398 KLHL36Q8N4N3 616 aa15.17■□□□□ 0.02
COL9A3-214ENST00000490398 BOLLQ8N9W6 283 aaKnown RBP15.17■□□□□ 0.02
COL9A3-214ENST00000490398 DEFB108BQ8NET1 73 aa15.17■□□□□ 0.02
COL9A3-214ENST00000490398 OR8B4Q96RC9 309 aa15.17■□□□□ 0.02
COL9A3-214ENST00000490398 CNN2Q99439 309 aaKnown RBP15.17■□□□□ 0.02
COL9A3-214ENST00000490398 APOL4Q9BPW4 351 aa15.17■□□□□ 0.02
COL9A3-214ENST00000490398 SLC22A4Q9H015 551 aa15.17■□□□□ 0.02
COL9A3-214ENST00000490398 C1orf123Q9NWV4 160 aa15.17■□□□□ 0.02
COL9A3-214ENST00000490398 FAM206AQ9NX38 181 aa15.17■□□□□ 0.02
COL9A3-214ENST00000490398 PPIAL4EA0A075B759 164 aa15.16■□□□□ 0.02
COL9A3-214ENST00000490398 E9PQ18 207 aa15.16■□□□□ 0.02
COL9A3-214ENST00000490398 PPIAL4DF5H284 164 aa15.16■□□□□ 0.02
COL9A3-214ENST00000490398 IFNL4K9M1U5 179 aa15.16■□□□□ 0.02
COL9A3-214ENST00000490398 PPIAL4FP0DN26 164 aa15.16■□□□□ 0.02
COL9A3-214ENST00000490398 EGR1P18146 543 aa15.16■□□□□ 0.02
COL9A3-214ENST00000490398 DDOSTP39656 456 aa15.16■□□□□ 0.02
COL9A3-214ENST00000490398 ROM1Q03395 351 aa15.16■□□□□ 0.02
COL9A3-214ENST00000490398 OR8B8Q15620 311 aa15.16■□□□□ 0.02
COL9A3-214ENST00000490398 ZIK1Q3SY52 487 aaPredicted RBP15.16■□□□□ 0.02
COL9A3-214ENST00000490398 ZNF404Q494X3 552 aa15.16■□□□□ 0.02
COL9A3-214ENST00000490398 DCAF12L2Q5VW00 463 aa15.16■□□□□ 0.02
COL9A3-214ENST00000490398 SSX6Q7RTT6 188 aa15.16■□□□□ 0.02
COL9A3-214ENST00000490398 SLC35F2Q8IXU6 374 aa15.16■□□□□ 0.02
COL9A3-214ENST00000490398 RBM4BQ9BQ04 359 aaKnown RBP15.16■□□□□ 0.02
COL9A3-214ENST00000490398 PRRG3Q9BZD7 231 aa15.16■□□□□ 0.02
COL9A3-214ENST00000490398 SP140LQ9H930 580 aa15.16■□□□□ 0.02
COL9A3-214ENST00000490398 PPIAL4AQ9Y536 164 aa15.16■□□□□ 0.02
COL9A3-214ENST00000490398 A0A0G2JMP0 313 aa15.15■□□□□ 0.02
COL9A3-214ENST00000490398 A0A0X1KG70 313 aa15.15■□□□□ 0.02
COL9A3-214ENST00000490398 LRRC30A6NM36 301 aa15.15■□□□□ 0.02
COL9A3-214ENST00000490398 ANKRD30BLA7E2S9 258 aa15.15■□□□□ 0.02
COL9A3-214ENST00000490398 SRSF10O75494 262 aaKnown RBP15.15■□□□□ 0.02
COL9A3-214ENST00000490398 PCMT1P22061 227 aa15.15■□□□□ 0.02
COL9A3-214ENST00000490398 CXCR4P61073 352 aa15.15■□□□□ 0.02
COL9A3-214ENST00000490398 CSNK2BP67870 215 aa15.15■□□□□ 0.02
COL9A3-214ENST00000490398 ELF3P78545 371 aaPredicted RBP15.15■□□□□ 0.02
COL9A3-214ENST00000490398 POU4F2Q12837 409 aa15.15■□□□□ 0.02
COL9A3-214ENST00000490398 KRTAP24-1Q3LI83 254 aa15.15■□□□□ 0.02
COL9A3-214ENST00000490398 SFRP4Q6FHJ7 346 aaPredicted RBP15.15■□□□□ 0.02
COL9A3-214ENST00000490398 KLBQ86Z14 1044 aa15.15■□□□□ 0.02
COL9A3-214ENST00000490398 CBR4Q8N4T8 237 aa15.15■□□□□ 0.02
COL9A3-214ENST00000490398 OR4M2Q8NGB6 313 aa15.15■□□□□ 0.02
COL9A3-214ENST00000490398 OR51G2Q8NGK0 314 aa15.15■□□□□ 0.02
COL9A3-214ENST00000490398 OR11L1Q8NGX0 322 aa15.15■□□□□ 0.02
COL9A3-214ENST00000490398 ERGIC1Q969X5 290 aa15.15■□□□□ 0.02
COL9A3-214ENST00000490398 EME1Q96AY2 570 aa15.15■□□□□ 0.02
COL9A3-214ENST00000490398 TBX5Q99593 518 aa15.15■□□□□ 0.02
COL9A3-214ENST00000490398 FN3KRPQ9HA64 309 aa15.15■□□□□ 0.02
COL9A3-214ENST00000490398 USE1Q9NZ43 259 aa15.15■□□□□ 0.02
COL9A3-214ENST00000490398 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.15■□□□□ 0.02
COL9A3-214ENST00000490398 H2AFY2Q9P0M6 372 aaPredicted RBP15.15■□□□□ 0.02
COL9A3-214ENST00000490398 RNF7Q9UBF6 113 aa15.15■□□□□ 0.02
COL9A3-214ENST00000490398 AASSQ9UDR5 926 aa15.15■□□□□ 0.02
COL9A3-214ENST00000490398 TMEM269A0A1B0GVZ9 245 aa15.14■□□□□ 0.01
COL9A3-214ENST00000490398 SLC22A31A6NKX4 558 aa15.14■□□□□ 0.01
COL9A3-214ENST00000490398 ZNF850A8MQ14 1090 aa15.14■□□□□ 0.01
COL9A3-214ENST00000490398 FOXH1O75593 365 aa15.14■□□□□ 0.01
COL9A3-214ENST00000490398 RPS2P15880 293 aaKnown RBP15.14■□□□□ 0.01
COL9A3-214ENST00000490398 THBS2P35442 1172 aa15.14■□□□□ 0.01
COL9A3-214ENST00000490398 DMRTC1Q5HYR2 192 aa15.14■□□□□ 0.01
COL9A3-214ENST00000490398 ZFP1Q6P2D0 407 aa15.14■□□□□ 0.01
COL9A3-214ENST00000490398 KCTD18Q6PI47 426 aaPredicted RBP15.14■□□□□ 0.01
COL9A3-214ENST00000490398 DEGS2Q6QHC5 323 aa15.14■□□□□ 0.01
COL9A3-214ENST00000490398 ZNF322Q6U7Q0 402 aaPredicted RBP15.14■□□□□ 0.01
COL9A3-214ENST00000490398 PHC2Q8IXK0 858 aa15.14■□□□□ 0.01
COL9A3-214ENST00000490398 ZNF679Q8IYX0 411 aa15.14■□□□□ 0.01
COL9A3-214ENST00000490398 MUC20Q8N307 709 aaPredicted RBP15.14■□□□□ 0.01
COL9A3-214ENST00000490398 GCSAMQ8N6F7 178 aa15.14■□□□□ 0.01
COL9A3-214ENST00000490398 MBOAT4Q96T53 435 aa15.14■□□□□ 0.01
COL9A3-214ENST00000490398 SLC29A1Q99808 456 aa15.14■□□□□ 0.01
COL9A3-214ENST00000490398 MROQ9BYG7 248 aa15.14■□□□□ 0.01
COL9A3-214ENST00000490398 PBOV1Q9GZY1 135 aa15.14■□□□□ 0.01
COL9A3-214ENST00000490398 NIPAL2Q9H841 368 aa15.14■□□□□ 0.01
COL9A3-214ENST00000490398 S100A14Q9HCY8 104 aa15.14■□□□□ 0.01
COL9A3-214ENST00000490398 HAO2Q9NYQ3 351 aa15.14■□□□□ 0.01
COL9A3-214ENST00000490398 MRM2Q9UI43 246 aaKnown RBP15.14■□□□□ 0.01
COL9A3-214ENST00000490398 IKZF2Q9UKS7 526 aa15.14■□□□□ 0.01
COL9A3-214ENST00000490398 A6NLC8 198 aa15.13■□□□□ 0.01
COL9A3-214ENST00000490398 RNF212BA8MTL3 300 aa15.13■□□□□ 0.01
COL9A3-214ENST00000490398 A8MXK9 166 aa15.13■□□□□ 0.01
COL9A3-214ENST00000490398 TNFRSF13BO14836 293 aaPredicted RBP15.13■□□□□ 0.01
COL9A3-214ENST00000490398 FCN3O75636 299 aa15.13■□□□□ 0.01
COL9A3-214ENST00000490398 RGS9O75916 674 aaPredicted RBP15.13■□□□□ 0.01
COL9A3-214ENST00000490398 IGLV3-1P01715 115 aa15.13■□□□□ 0.01
COL9A3-214ENST00000490398 IRF2P14316 349 aa15.13■□□□□ 0.01
COL9A3-214ENST00000490398 HTR1FP30939 366 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms