RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 SLC25A35Q3KQZ1 300 aa2.08□□□□□ -2.08
CD46-216ENST00000490278 KPRPQ5T749 579 aaPredicted RBP2.08□□□□□ -2.08
CD46-216ENST00000490278 FAM222AQ5U5X8 452 aa2.08□□□□□ -2.08
CD46-216ENST00000490278 CD300LGQ6UXG3 332 aa2.08□□□□□ -2.08
CD46-216ENST00000490278 ANGPTL8Q6UXH0 198 aa2.08□□□□□ -2.08
CD46-216ENST00000490278 UNC93AQ86WB7 457 aa2.08□□□□□ -2.08
CD46-216ENST00000490278 MIR7-3HGQ8N6C7 128 aa2.08□□□□□ -2.08
CD46-216ENST00000490278 ITFG1Q8TB96 612 aa2.08□□□□□ -2.08
CD46-216ENST00000490278 RXFP4Q8TDU9 374 aa2.08□□□□□ -2.08
CD46-216ENST00000490278 CA5BP1Q8WTZ4 195 aa2.08□□□□□ -2.08
CD46-216ENST00000490278 GHSRQ92847 366 aa2.08□□□□□ -2.08
CD46-216ENST00000490278 TEAD3Q99594 435 aa2.08□□□□□ -2.08
CD46-216ENST00000490278 CLSTN2Q9H4D0 955 aa2.08□□□□□ -2.08
CD46-216ENST00000490278 ZNF442Q9H7R0 627 aa2.08□□□□□ -2.08
CD46-216ENST00000490278 PXMP2Q9NR77 195 aa2.08□□□□□ -2.08
CD46-216ENST00000490278 AHSPQ9NZD4 102 aa2.08□□□□□ -2.08
CD46-216ENST00000490278 COMMD3-BMI1R4GMX3 469 aa2.08□□□□□ -2.08
CD46-216ENST00000490278 MROH7Q68CQ1 1323 aa2.08□□□□□ -2.08
CD46-216ENST00000490278 IGHV1-3A0A0C4DH29 117 aa2.07□□□□□ -2.08
CD46-216ENST00000490278 TGM6O95932 706 aa2.07□□□□□ -2.08
CD46-216ENST00000490278 TACSTD2P09758 323 aa2.07□□□□□ -2.08
CD46-216ENST00000490278 PSMB5P28074 263 aa2.07□□□□□ -2.08
CD46-216ENST00000490278 PCK1P35558 622 aa2.07□□□□□ -2.08
CD46-216ENST00000490278 GPR1P46091 355 aa2.07□□□□□ -2.08
CD46-216ENST00000490278 UBE2E1P51965 193 aa2.07□□□□□ -2.08
CD46-216ENST00000490278 AP1S2P56377 157 aa2.07□□□□□ -2.08
CD46-216ENST00000490278 KDSRQ06136 332 aa2.07□□□□□ -2.08
CD46-216ENST00000490278 ZNF33AQ06730 810 aa2.07□□□□□ -2.08
CD46-216ENST00000490278 SLC39A6Q13433 755 aa2.07□□□□□ -2.08
CD46-216ENST00000490278 GABRA6Q16445 453 aa2.07□□□□□ -2.08
CD46-216ENST00000490278 TMPRSS11AQ6ZMR5 421 aa2.07□□□□□ -2.08
CD46-216ENST00000490278 ERO1BQ86YB8 467 aa2.07□□□□□ -2.08
CD46-216ENST00000490278 INO80EQ8NBZ0 244 aaPredicted RBP2.07□□□□□ -2.08
CD46-216ENST00000490278 GLYATL2Q8WU03 294 aa2.07□□□□□ -2.08
CD46-216ENST00000490278 APH1AQ96BI3 265 aa2.07□□□□□ -2.08
CD46-216ENST00000490278 KCNS1Q96KK3 526 aa2.07□□□□□ -2.08
CD46-216ENST00000490278 KCNS3Q9BQ31 491 aa2.07□□□□□ -2.08
CD46-216ENST00000490278 ZSCAN16Q9H4T2 348 aaPredicted RBP2.07□□□□□ -2.08
CD46-216ENST00000490278 ZC4H2Q9NQZ6 224 aa2.07□□□□□ -2.08
CD46-216ENST00000490278 CAB39Q9Y376 341 aaPredicted RBP2.07□□□□□ -2.08
CD46-216ENST00000490278 COL27A1Q8IZC6 1860 aaPredicted RBP2.07□□□□□ -2.08
CD46-216ENST00000490278 SCN1AP35498 2009 aa2.07□□□□□ -2.08
CD46-216ENST00000490278 BTNL10A8MVZ5 291 aa2.06□□□□□ -2.08
CD46-216ENST00000490278 ZBTB5O15062 677 aa2.06□□□□□ -2.08
CD46-216ENST00000490278 POLR1CO15160 346 aaPredicted RBP2.06□□□□□ -2.08
CD46-216ENST00000490278 GATBO75879 557 aaKnown RBP2.06□□□□□ -2.08
CD46-216ENST00000490278 ASGR1P07306 291 aa2.06□□□□□ -2.08
CD46-216ENST00000490278 HSPD1P10809 573 aaKnown RBP2.06□□□□□ -2.08
CD46-216ENST00000490278 CD82P27701 267 aa2.06□□□□□ -2.08
CD46-216ENST00000490278 FUT5Q11128 374 aa2.06□□□□□ -2.08
CD46-216ENST00000490278 NAB1Q13506 487 aa2.06□□□□□ -2.08
CD46-216ENST00000490278 PLCXD3Q63HM9 321 aa2.06□□□□□ -2.08
CD46-216ENST00000490278 OPN5Q6U736 354 aa2.06□□□□□ -2.08
CD46-216ENST00000490278 OTUD6AQ7L8S5 288 aa2.06□□□□□ -2.08
CD46-216ENST00000490278 FAM122BQ7Z309 247 aa2.06□□□□□ -2.08
CD46-216ENST00000490278 ZNF101Q8IZC7 436 aa2.06□□□□□ -2.08
CD46-216ENST00000490278 SLC35G3Q8N808 338 aa2.06□□□□□ -2.08
CD46-216ENST00000490278 LRRC75AQ8NAA5 344 aa2.06□□□□□ -2.08
CD46-216ENST00000490278 APCDD1LQ8NCL9 501 aa2.06□□□□□ -2.08
CD46-216ENST00000490278 OR1L1Q8NH94 360 aa2.06□□□□□ -2.08
CD46-216ENST00000490278 ASZ1Q8WWH4 475 aa2.06□□□□□ -2.08
CD46-216ENST00000490278 CDS1Q92903 461 aa2.06□□□□□ -2.08
CD46-216ENST00000490278 C18orf15Q96N68 181 aa2.06□□□□□ -2.08
CD46-216ENST00000490278 IP6K3Q96PC2 410 aa2.06□□□□□ -2.08
CD46-216ENST00000490278 OR4K3Q96R72 315 aa2.06□□□□□ -2.08
CD46-216ENST00000490278 AGMATQ9BSE5 352 aa2.06□□□□□ -2.08
CD46-216ENST00000490278 DEFB129Q9H1M3 183 aa2.06□□□□□ -2.08
CD46-216ENST00000490278 CD209Q9NNX6 404 aa2.06□□□□□ -2.08
CD46-216ENST00000490278 WDR19Q8NEZ3 1342 aa2.06□□□□□ -2.08
CD46-216ENST00000490278 ANKRD12Q6UB98 2062 aa2.05□□□□□ -2.08
CD46-216ENST00000490278 SIVA1O15304 175 aa2.05□□□□□ -2.08
CD46-216ENST00000490278 SLC19A2O60779 497 aa2.05□□□□□ -2.08
CD46-216ENST00000490278 MPDU1O75352 247 aa2.05□□□□□ -2.08
CD46-216ENST00000490278 RNASE2P10153 161 aaKnown RBP2.05□□□□□ -2.08
CD46-216ENST00000490278 SFTPCP11686 197 aa2.05□□□□□ -2.08
CD46-216ENST00000490278 GFAPP14136 432 aa2.05□□□□□ -2.08
CD46-216ENST00000490278 OR2B8PP59922 312 aa2.05□□□□□ -2.08
CD46-216ENST00000490278 DMC1Q14565 340 aa2.05□□□□□ -2.08
CD46-216ENST00000490278 RAB43Q86YS6 212 aa2.05□□□□□ -2.08
CD46-216ENST00000490278 ENKURQ8TC29 256 aa2.05□□□□□ -2.08
CD46-216ENST00000490278 AGR3Q8TD06 166 aa2.05□□□□□ -2.08
CD46-216ENST00000490278 GPX8Q8TED1 209 aa2.05□□□□□ -2.08
CD46-216ENST00000490278 DCAKDQ8WVC6 231 aa2.05□□□□□ -2.08
CD46-216ENST00000490278 RCN3Q96D15 328 aa2.05□□□□□ -2.08
CD46-216ENST00000490278 SCGB3A2Q96PL1 93 aa2.05□□□□□ -2.08
CD46-216ENST00000490278 EMC6Q9BV81 110 aa2.05□□□□□ -2.08
CD46-216ENST00000490278 NUDT9Q9BW91 350 aa2.05□□□□□ -2.08
CD46-216ENST00000490278 DDX19BQ9UMR2 479 aa2.05□□□□□ -2.08
CD46-216ENST00000490278 LRRC42Q9Y546 428 aa2.05□□□□□ -2.08
CD46-216ENST00000490278 PHLPP2Q6ZVD8 1323 aa2.05□□□□□ -2.08
CD46-216ENST00000490278 GPR179Q6PRD1 2367 aa2.05□□□□□ -2.08
CD46-216ENST00000490278 IGHV3OR16-8A0A075B7F1 116 aa2.04□□□□□ -2.08
CD46-216ENST00000490278 A0A0A6YYD5 115 aa2.04□□□□□ -2.08
CD46-216ENST00000490278 NCF1BA6NI72 391 aaPredicted RBP2.04□□□□□ -2.08
CD46-216ENST00000490278 ZNF98A6NK75 572 aa2.04□□□□□ -2.08
CD46-216ENST00000490278 NCF1CA8MVU1 366 aaPredicted RBP2.04□□□□□ -2.08
CD46-216ENST00000490278 H0YIV9 168 aa2.04□□□□□ -2.08
CD46-216ENST00000490278 M0R1X1 148 aa2.04□□□□□ -2.08
CD46-216ENST00000490278 MANBAO00462 879 aa2.04□□□□□ -2.08
CD46-216ENST00000490278 AKR7A2O43488 359 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms