RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 VSIG10L2P0DP72 767 aa11.4□□□□□ -0.58
VARS-227ENST00000489979 TROVE2P10155 538 aaKnown RBP eCLIP11.4□□□□□ -0.58
VARS-227ENST00000489979 UBE2E1P51965 193 aa11.4□□□□□ -0.58
VARS-227ENST00000489979 NSUN5P1Q3KNT7 163 aa11.4□□□□□ -0.58
VARS-227ENST00000489979 FGD3Q5JSP0 725 aa11.4□□□□□ -0.58
VARS-227ENST00000489979 SMARCD3Q6STE5 483 aa11.4□□□□□ -0.58
VARS-227ENST00000489979 WDR86Q86TI4 376 aa11.4□□□□□ -0.58
VARS-227ENST00000489979 BEND2Q8NDZ0 799 aa11.4□□□□□ -0.58
VARS-227ENST00000489979 OR4K13Q8NH42 304 aa11.4□□□□□ -0.58
VARS-227ENST00000489979 OR2T6Q8NHC8 308 aa11.4□□□□□ -0.58
VARS-227ENST00000489979 C17orf50Q8WW18 174 aa11.4□□□□□ -0.58
VARS-227ENST00000489979 HSH2DQ96JZ2 352 aa11.4□□□□□ -0.58
VARS-227ENST00000489979 SSX3Q99909 188 aa11.4□□□□□ -0.58
VARS-227ENST00000489979 FN3KQ9H479 309 aa11.4□□□□□ -0.58
VARS-227ENST00000489979 RNPEPL1Q9HAU8 725 aa11.4□□□□□ -0.58
VARS-227ENST00000489979 INTS9Q9NV88 658 aaKnown RBP11.4□□□□□ -0.58
VARS-227ENST00000489979 CMTM6Q9NX76 183 aa11.4□□□□□ -0.58
VARS-227ENST00000489979 MAB21L2Q9Y586 359 aa11.4□□□□□ -0.58
VARS-227ENST00000489979 ENPP4Q9Y6X5 453 aa11.4□□□□□ -0.58
VARS-227ENST00000489979 LOC100653049A0A140TA62 436 aa11.39□□□□□ -0.59
VARS-227ENST00000489979 A0A1W2PRQ8 180 aa11.39□□□□□ -0.59
VARS-227ENST00000489979 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.39□□□□□ -0.59
VARS-227ENST00000489979 CXCR6O00574 342 aa11.39□□□□□ -0.59
VARS-227ENST00000489979 KRT34O76011 436 aa11.39□□□□□ -0.59
VARS-227ENST00000489979 SELLP14151 372 aa11.39□□□□□ -0.59
VARS-227ENST00000489979 HIST1H1CP16403 213 aaKnown RBP11.39□□□□□ -0.59
VARS-227ENST00000489979 AMY2BP19961 511 aa11.39□□□□□ -0.59
VARS-227ENST00000489979 GRK5P34947 590 aa11.39□□□□□ -0.59
VARS-227ENST00000489979 RPS27P42677 84 aaKnown RBP11.39□□□□□ -0.59
VARS-227ENST00000489979 CSNK2BP67870 215 aa11.39□□□□□ -0.59
VARS-227ENST00000489979 KLF10Q13118 480 aa11.39□□□□□ -0.59
VARS-227ENST00000489979 DGCR6Q14129 220 aa11.39□□□□□ -0.59
VARS-227ENST00000489979 SEC23BQ15437 767 aa11.39□□□□□ -0.59
VARS-227ENST00000489979 LRRC10Q5BKY1 277 aa11.39□□□□□ -0.59
VARS-227ENST00000489979 WDR82Q6UXN9 313 aa11.39□□□□□ -0.59
VARS-227ENST00000489979 DPY19L4Q7Z388 723 aa11.39□□□□□ -0.59
VARS-227ENST00000489979 ZBTB46Q86UZ6 589 aa11.39□□□□□ -0.59
VARS-227ENST00000489979 OR4S1Q8NGB4 309 aa11.39□□□□□ -0.59
VARS-227ENST00000489979 OR8S1Q8NH09 359 aa11.39□□□□□ -0.59
VARS-227ENST00000489979 C8orf46Q8TAG6 207 aa11.39□□□□□ -0.59
VARS-227ENST00000489979 H1FXQ92522 213 aaKnown RBP11.39□□□□□ -0.59
VARS-227ENST00000489979 RORBQ92753 470 aa11.39□□□□□ -0.59
VARS-227ENST00000489979 PHF21AQ96BD5 680 aa11.39□□□□□ -0.59
VARS-227ENST00000489979 CLPTM1LQ96KA5 538 aa11.39□□□□□ -0.59
VARS-227ENST00000489979 SIKE1Q9BRV8 207 aa11.39□□□□□ -0.59
VARS-227ENST00000489979 NSRP1Q9H0G5 558 aaKnown RBP11.39□□□□□ -0.59
VARS-227ENST00000489979 MRPL22Q9NWU5 206 aaKnown RBP11.39□□□□□ -0.59
VARS-227ENST00000489979 N6AMT1Q9Y5N5 214 aa11.39□□□□□ -0.59
VARS-227ENST00000489979 TRBV4-1A0A0J9YWV2 114 aa11.38□□□□□ -0.59
VARS-227ENST00000489979 OR6C68A6NDL8 312 aa11.38□□□□□ -0.59
VARS-227ENST00000489979 EDF1O60869 148 aaKnown RBP11.38□□□□□ -0.59
VARS-227ENST00000489979 SERPINA1P01009 418 aa11.38□□□□□ -0.59
VARS-227ENST00000489979 ZNF823P16415 610 aa11.38□□□□□ -0.59
VARS-227ENST00000489979 TGM4P49221 684 aa11.38□□□□□ -0.59
VARS-227ENST00000489979 ACSM1Q08AH1 577 aa11.38□□□□□ -0.59
VARS-227ENST00000489979 MAPRE2Q15555 327 aa11.38□□□□□ -0.59
VARS-227ENST00000489979 NCR3LG1Q68D85 454 aa11.38□□□□□ -0.59
VARS-227ENST00000489979 DRAM2Q6UX65 266 aa11.38□□□□□ -0.59
VARS-227ENST00000489979 SDR9C7Q8NEX9 313 aa11.38□□□□□ -0.59
VARS-227ENST00000489979 OR1M1Q8NGA1 313 aa11.38□□□□□ -0.59
VARS-227ENST00000489979 OR5T2Q8NGG2 359 aa11.38□□□□□ -0.59
VARS-227ENST00000489979 FANK1Q8TC84 345 aa11.38□□□□□ -0.59
VARS-227ENST00000489979 ATP6V1G3Q96LB4 118 aa11.38□□□□□ -0.59
VARS-227ENST00000489979 FAM234AQ9H0X4 552 aa11.38□□□□□ -0.59
VARS-227ENST00000489979 MMP28Q9H239 520 aa11.38□□□□□ -0.59
VARS-227ENST00000489979 RANBP3Q9H6Z4 567 aaPredicted RBP11.38□□□□□ -0.59
VARS-227ENST00000489979 KCNG2Q9UJ96 466 aa11.38□□□□□ -0.59
VARS-227ENST00000489979 ANKRD30BLA7E2S9 258 aa11.37□□□□□ -0.59
VARS-227ENST00000489979 ARPC3O15145 178 aa11.37□□□□□ -0.59
VARS-227ENST00000489979 GSTA4O15217 222 aa11.37□□□□□ -0.59
VARS-227ENST00000489979 VSIG8P0DPA2 414 aa11.37□□□□□ -0.59
VARS-227ENST00000489979 SLC2A1P11166 492 aa11.37□□□□□ -0.59
VARS-227ENST00000489979 PAX6P26367 422 aa11.37□□□□□ -0.59
VARS-227ENST00000489979 SLC6A6P31641 620 aa11.37□□□□□ -0.59
VARS-227ENST00000489979 OTX1P32242 354 aaPredicted RBP11.37□□□□□ -0.59
VARS-227ENST00000489979 PRKXP51817 358 aa11.37□□□□□ -0.59
VARS-227ENST00000489979 GMFBP60983 142 aa11.37□□□□□ -0.59
VARS-227ENST00000489979 LIPEQ05469 1076 aa11.37□□□□□ -0.59
VARS-227ENST00000489979 LRRC75BQ2VPJ9 315 aa11.37□□□□□ -0.59
VARS-227ENST00000489979 STUMQ69YW2 141 aa11.37□□□□□ -0.59
VARS-227ENST00000489979 PGBD2Q6P3X8 592 aa11.37□□□□□ -0.59
VARS-227ENST00000489979 CRIP3Q6Q6R5 217 aa11.37□□□□□ -0.59
VARS-227ENST00000489979 OR51G2Q8NGK0 314 aa11.37□□□□□ -0.59
VARS-227ENST00000489979 OR9Q1Q8NGQ5 310 aa11.37□□□□□ -0.59
VARS-227ENST00000489979 C12orf43Q96C57 262 aaKnown RBP11.37□□□□□ -0.59
VARS-227ENST00000489979 COPS4Q9BT78 406 aa11.37□□□□□ -0.59
VARS-227ENST00000489979 OR52D1Q9H346 318 aa11.37□□□□□ -0.59
VARS-227ENST00000489979 OPA3Q9H6K4 179 aa11.37□□□□□ -0.59
VARS-227ENST00000489979 METTL8Q9H825 291 aaKnown RBP11.37□□□□□ -0.59
VARS-227ENST00000489979 RAB18Q9NP72 206 aa11.37□□□□□ -0.59
VARS-227ENST00000489979 KRCC1Q9NPI7 259 aaPredicted RBP11.37□□□□□ -0.59
VARS-227ENST00000489979 SNTG1Q9NSN8 517 aa11.37□□□□□ -0.59
VARS-227ENST00000489979 FAM32AQ9Y421 112 aaKnown RBP11.37□□□□□ -0.59
VARS-227ENST00000489979 COL7A1Q02388 2944 aa11.36□□□□□ -0.59
VARS-227ENST00000489979 M0R1W7 72 aa11.36□□□□□ -0.59
VARS-227ENST00000489979 FBXO24O75426 580 aa11.36□□□□□ -0.59
VARS-227ENST00000489979 MPIG6BO95866 241 aa11.36□□□□□ -0.59
VARS-227ENST00000489979 TFF1P04155 84 aa11.36□□□□□ -0.59
VARS-227ENST00000489979 CD28P10747 220 aa11.36□□□□□ -0.59
VARS-227ENST00000489979 PSKH1P11801 424 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms