RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 C4orf51C9J302 202 aa2.03□□□□□ -2.08
CCDC39-206ENST00000489868 GATBO75879 557 aaKnown RBP2.03□□□□□ -2.08
CCDC39-206ENST00000489868 FSTL3O95633 263 aa2.03□□□□□ -2.08
CCDC39-206ENST00000489868 IGLV7-43P04211 117 aa2.03□□□□□ -2.08
CCDC39-206ENST00000489868 NELFEP18615 380 aaKnown RBP2.03□□□□□ -2.08
CCDC39-206ENST00000489868 GTF2E2P29084 291 aaKnown RBP2.03□□□□□ -2.08
CCDC39-206ENST00000489868 OTX1P32242 354 aaPredicted RBP2.03□□□□□ -2.08
CCDC39-206ENST00000489868 PPICP45877 212 aa2.03□□□□□ -2.08
CCDC39-206ENST00000489868 SERPINB8P50452 374 aa2.03□□□□□ -2.08
CCDC39-206ENST00000489868 ARMC12Q5T9G4 340 aa2.03□□□□□ -2.08
CCDC39-206ENST00000489868 DAZ4Q86SG3 579 aaKnown RBP2.03□□□□□ -2.08
CCDC39-206ENST00000489868 HORMAD1Q86X24 394 aa2.03□□□□□ -2.08
CCDC39-206ENST00000489868 XPO6Q96QU8 1125 aaKnown RBP2.03□□□□□ -2.08
CCDC39-206ENST00000489868 TGS1Q96RS0 853 aaKnown RBP2.03□□□□□ -2.08
CCDC39-206ENST00000489868 C1orf50Q9BV19 199 aa2.03□□□□□ -2.08
CCDC39-206ENST00000489868 UCK2Q9BZX2 261 aa2.03□□□□□ -2.08
CCDC39-206ENST00000489868 MRM3Q9HC36 420 aaKnown RBP2.03□□□□□ -2.08
CCDC39-206ENST00000489868 ZNF160Q9HCG1 818 aa2.03□□□□□ -2.08
CCDC39-206ENST00000489868 DAZ1Q9NQZ3 744 aaKnown RBP2.03□□□□□ -2.08
CCDC39-206ENST00000489868 ZNF492Q9P255 531 aa2.03□□□□□ -2.08
CCDC39-206ENST00000489868 HPCAL4Q9UM19 191 aa2.03□□□□□ -2.08
CCDC39-206ENST00000489868 RCL1Q9Y2P8 373 aaKnown RBP2.03□□□□□ -2.08
CCDC39-206ENST00000489868 SVILO95425 2214 aa2.03□□□□□ -2.08
CCDC39-206ENST00000489868 M0R1X1 148 aa2.02□□□□□ -2.09
CCDC39-206ENST00000489868 CIB2O75838 187 aa2.02□□□□□ -2.09
CCDC39-206ENST00000489868 HSPD1P10809 573 aaKnown RBP2.02□□□□□ -2.09
CCDC39-206ENST00000489868 TNFRSF9Q07011 255 aa2.02□□□□□ -2.09
CCDC39-206ENST00000489868 SMARCD3Q6STE5 483 aa2.02□□□□□ -2.09
CCDC39-206ENST00000489868 ZYG11AQ6WRX3 759 aa2.02□□□□□ -2.09
CCDC39-206ENST00000489868 TTC29Q8NA56 475 aaPredicted RBP2.02□□□□□ -2.09
CCDC39-206ENST00000489868 BPIFCQ8NFQ6 507 aa2.02□□□□□ -2.09
CCDC39-206ENST00000489868 OR56A4Q8NGH8 313 aa2.02□□□□□ -2.09
CCDC39-206ENST00000489868 ZYG11BQ9C0D3 744 aa2.02□□□□□ -2.09
CCDC39-206ENST00000489868 DYRK4Q9NR20 520 aa2.02□□□□□ -2.09
CCDC39-206ENST00000489868 IL37Q9NZH6 218 aa2.02□□□□□ -2.09
CCDC39-206ENST00000489868 HES2Q9Y543 173 aa2.02□□□□□ -2.09
CCDC39-206ENST00000489868 NINLQ9Y2I6 1382 aa2.01□□□□□ -2.09
CCDC39-206ENST00000489868 CCL15-CCL14A0A0B4J2E2 113 aa2.01□□□□□ -2.09
CCDC39-206ENST00000489868 ZNF878C9JN71 531 aa2.01□□□□□ -2.09
CCDC39-206ENST00000489868 CLTAP09496 248 aa2.01□□□□□ -2.09
CCDC39-206ENST00000489868 TCP1P17987 556 aaKnown RBP2.01□□□□□ -2.09
CCDC39-206ENST00000489868 NBL1P41271 181 aa2.01□□□□□ -2.09
CCDC39-206ENST00000489868 UBE2MP61081 183 aaKnown RBP2.01□□□□□ -2.09
CCDC39-206ENST00000489868 CCL15Q16663 113 aa2.01□□□□□ -2.09
CCDC39-206ENST00000489868 SPESP1Q6UW49 350 aa2.01□□□□□ -2.09
CCDC39-206ENST00000489868 LINC00336Q6ZUF6 198 aa2.01□□□□□ -2.09
CCDC39-206ENST00000489868 NT5DC3Q86UY8 548 aa2.01□□□□□ -2.09
CCDC39-206ENST00000489868 ENKURQ8TC29 256 aa2.01□□□□□ -2.09
CCDC39-206ENST00000489868 N4BP2L2Q92802 583 aaPredicted RBP2.01□□□□□ -2.09
CCDC39-206ENST00000489868 CDS1Q92903 461 aa2.01□□□□□ -2.09
CCDC39-206ENST00000489868 RERGQ96A58 199 aaPredicted RBP2.01□□□□□ -2.09
CCDC39-206ENST00000489868 S100PBPQ96BU1 408 aa2.01□□□□□ -2.09
CCDC39-206ENST00000489868 RWDD2AQ9UIY3 292 aa2.01□□□□□ -2.09
CCDC39-206ENST00000489868 A0A0A6YYD5 115 aa2□□□□□ -2.09
CCDC39-206ENST00000489868 C17orf51A8MQB3 221 aa2□□□□□ -2.09
CCDC39-206ENST00000489868 ANKRD65E5RJM6 399 aa2□□□□□ -2.09
CCDC39-206ENST00000489868 SLC16A7O60669 478 aa2□□□□□ -2.09
CCDC39-206ENST00000489868 CCNB2O95067 398 aa2□□□□□ -2.09
CCDC39-206ENST00000489868 TRBV12-3P01733 135 aa2□□□□□ -2.09
CCDC39-206ENST00000489868 EIF2S2P20042 333 aaKnown RBP2□□□□□ -2.09
CCDC39-206ENST00000489868 RFC3P40938 356 aa2□□□□□ -2.09
CCDC39-206ENST00000489868 IFITM3Q01628 133 aa2□□□□□ -2.09
CCDC39-206ENST00000489868 ILKQ13418 452 aa2□□□□□ -2.09
CCDC39-206ENST00000489868 KDM4DQ6B0I6 523 aa2□□□□□ -2.09
CCDC39-206ENST00000489868 TMEM220Q6QAJ8 160 aa2□□□□□ -2.09
CCDC39-206ENST00000489868 FAM131AQ6UXB0 335 aa2□□□□□ -2.09
CCDC39-206ENST00000489868 SCD5Q86SK9 330 aa2□□□□□ -2.09
CCDC39-206ENST00000489868 LINC00469Q8N7U9 141 aa2□□□□□ -2.09
CCDC39-206ENST00000489868 OR4C5Q8NGB2 326 aa2□□□□□ -2.09
CCDC39-206ENST00000489868 OR52N1Q8NH53 320 aa2□□□□□ -2.09
CCDC39-206ENST00000489868 DCAKDQ8WVC6 231 aa2□□□□□ -2.09
CCDC39-206ENST00000489868 C8orf44Q96CB5 159 aa2□□□□□ -2.09
CCDC39-206ENST00000489868 PKMYT1Q99640 499 aa2□□□□□ -2.09
CCDC39-206ENST00000489868 SYNJ2BP-COX16A0A087WUM0 186 aa1.99□□□□□ -2.09
CCDC39-206ENST00000489868 IGKV1-6A0A0C4DH72 117 aa1.99□□□□□ -2.09
CCDC39-206ENST00000489868 H7C0C1 242 aa1.99□□□□□ -2.09
CCDC39-206ENST00000489868 ERI3O43414 337 aaKnown RBP1.99□□□□□ -2.09
CCDC39-206ENST00000489868 IGKV1-39P01597 117 aa1.99□□□□□ -2.09
CCDC39-206ENST00000489868 IGKV1D-39P04432 117 aa1.99□□□□□ -2.09
CCDC39-206ENST00000489868 ATP5OP48047 213 aa1.99□□□□□ -2.09
CCDC39-206ENST00000489868 BTN1A1Q13410 526 aa1.99□□□□□ -2.09
CCDC39-206ENST00000489868 TRMT5Q32P41 509 aaKnown RBP1.99□□□□□ -2.09
CCDC39-206ENST00000489868 C6orf99Q4VX62 202 aa1.99□□□□□ -2.09
CCDC39-206ENST00000489868 SLC25A29Q8N8R3 303 aa1.99□□□□□ -2.09
CCDC39-206ENST00000489868 UBAC2Q8NBM4 344 aa1.99□□□□□ -2.09
CCDC39-206ENST00000489868 OR52E5Q8NH55 327 aa1.99□□□□□ -2.09
CCDC39-206ENST00000489868 TMEM185BQ9H7F4 350 aa1.99□□□□□ -2.09
CCDC39-206ENST00000489868 TRIM45Q9H8W5 580 aaPredicted RBP1.99□□□□□ -2.09
CCDC39-206ENST00000489868 CA10Q9NS85 328 aa1.99□□□□□ -2.09
CCDC39-206ENST00000489868 LYARQ9NX58 379 aaKnown RBP1.99□□□□□ -2.09
CCDC39-206ENST00000489868 NACADO15069 1562 aa1.98□□□□□ -2.09
CCDC39-206ENST00000489868 TSPAN11A1L157 253 aa1.98□□□□□ -2.09
CCDC39-206ENST00000489868 SLC19A2O60779 497 aa1.98□□□□□ -2.09
CCDC39-206ENST00000489868 SCELO95171 688 aa1.98□□□□□ -2.09
CCDC39-206ENST00000489868 MYL9P24844 172 aa1.98□□□□□ -2.09
CCDC39-206ENST00000489868 STOMP27105 288 aa1.98□□□□□ -2.09
CCDC39-206ENST00000489868 UQCRFS1P47985 274 aa1.98□□□□□ -2.09
CCDC39-206ENST00000489868 ZNF678Q5SXM1 525 aa1.98□□□□□ -2.09
CCDC39-206ENST00000489868 TMEM236Q5W0B7 351 aa1.98□□□□□ -2.09
CCDC39-206ENST00000489868 CARD17Q5XLA6 110 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms