RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 SSR4P51571 173 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 UGT2B15P54855 530 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 NDUFV3P56181 108 aaKnown RBP2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 POLR2GP62487 172 aaKnown RBP eCLIP2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 MRPS11P82912 194 aaKnown RBP2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 TGFBR3Q03167 851 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 PRKCDQ05655 676 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 ECH1Q13011 328 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 STX5Q13190 355 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 SIX1Q15475 284 aaPredicted RBP2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 GUSBP1Q15486 140 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 PSMD5Q16401 504 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 C17orf58Q2M2W7 97 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 GOLGA7BQ2TAP0 167 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 TMEM249Q2WGJ8 235 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 C14orf28Q4W4Y0 310 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 TFDP3Q5H9I0 405 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 GCSAMLQ5JQS6 135 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 OR10J3Q5JRS4 329 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 MUC21Q5SSG8 566 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 PWWP2BQ6NUJ5 590 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 ARMCX5Q6P1M9 558 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 LCLAT1Q6UWP7 414 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 METTL7BQ6UX53 244 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 CASP12Q6UXS9 341 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 CHMP1BQ7LBR1 199 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 S100A7AQ86SG5 101 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 HIPK1Q86Z02 1210 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 APLFQ8IW19 511 aaPredicted RBP2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 RDH10Q8IZV5 341 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 VKORC1L1Q8N0U8 176 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 MTURNQ8N3F0 131 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 RIBC1Q8N443 379 aaPredicted RBP2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 AQP11Q8NBQ7 271 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 MAPK1IP1LQ8NDC0 245 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 ZNF738Q8NE65 137 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 SFXN5Q8TD22 340 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 BLOC1S5Q8TDH9 187 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 CXorf40AQ8TE69 158 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 AGAP11Q8TF27 550 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 PHF10Q8WUB8 498 aaKnown RBP2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 TFB1MQ8WVM0 346 aaKnown RBP2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 TCTEX1D2Q8WW35 142 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 ANKRD9Q96BM1 317 aaPredicted RBP2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 YIPF6Q96EC8 236 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 ZNF599Q96NL3 588 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 AGMATQ9BSE5 352 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 COPS4Q9BT78 406 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 ELOVL4Q9GZR5 314 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 PORCNQ9H237 461 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 FBXO8Q9NRD0 319 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 C1orf109Q9NX04 203 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 NYAP2Q9P242 653 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 ZNF107Q9UII5 783 aaPredicted RBP2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 SAMD4AQ9UPU9 718 aaKnown RBP2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 KLF12Q9Y4X4 402 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 UBIAD1Q9Y5Z9 338 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 BAZ2BQ9UIF8 2168 aaKnown RBP2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 CEP290O15078 2479 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 PARP14Q460N5 1801 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 ASTN1O14525 1302 aa2.48□□□□□ -2.01
DEPDC1-204ENST00000489862 PLIN4Q96Q06 1357 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 IGHV4-4A0A075B6R2 117 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 IGHV3OR16-12A0A075B7B8 117 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 A0A0A6YYH2 397 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 A6NJ64 397 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 RPL37AP8A6NKH3 93 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 HACD1B0YJ81 288 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 G3V3Y1 287 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 H7C1H1 209 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 CYTH3O43739 400 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 SNAP91O60641 907 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 ICOSLGO75144 302 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 ALOX12BO75342 701 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 C2P06681 752 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 GNB3P16520 340 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 IGFBP3P17936 291 aaPredicted RBP2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 SLC2A5P22732 501 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 CXCR2P25025 360 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 ADORA2BP29275 332 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 IL12AP29459 219 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 FOXN2P32314 431 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 GPX4P36969 197 aaPredicted RBP2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 RANBP1P43487 201 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 KLK7P49862 253 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 GNG10P50151 68 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 RORCP51449 518 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 GPM6AP51674 278 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 HCCSP53701 268 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 SUB1P53999 127 aaKnown RBP eCLIP2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 STXBP1P61764 594 aaKnown RBP2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 VSNL1P62760 191 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 DR1Q01658 176 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 TLE4Q04727 773 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 RAB31Q13636 194 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 LTB4RQ15722 352 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 UAP1Q16222 522 aaPredicted RBP2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 RGS21Q2M5E4 152 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 ACOT7LQ6ZUV0 252 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 TMEM179Q6ZVK1 233 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms