RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 TXNDC12O95881 172 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 IGHV4-38-2P0DP08 117 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 CTLA4P16410 223 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 GSTM3P21266 225 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 TNFSF4P23510 183 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 FXYD6P3P58550 94 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 RPS16P62249 146 aaKnown RBP5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 SCRN3Q0VDG4 424 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 BAMBIQ13145 260 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 KLF9Q13886 244 aaPredicted RBP5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 TRAM2Q15035 370 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 KRTAP27-1Q3LI81 207 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 ZBED5Q49AG3 693 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 MESTQ5EB52 335 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 RNASE12Q5GAN4 147 aaKnown RBP5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 SLC27A4Q6P1M0 643 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 LRRN1Q6UXK5 716 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 RBMS3Q6XE24 437 aaKnown RBP5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 ZNF841Q6ZN19 808 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 MBOAT2Q6ZWT7 520 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 VTCN1Q7Z7D3 282 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 MICU2Q8IYU8 434 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 OR2T12Q8NG77 320 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 OR8G5Q8NG78 346 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 DYDC1Q8WWB3 177 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 RAB40AQ8WXH6 277 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 SLC7A6Q92536 515 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 Q96M85 177 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 COG8Q96MW5 612 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 DUX5Q96PT3 197 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 FYTTD1Q96QD9 318 aaKnown RBP5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 OR2V2Q96R30 315 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 GPX7Q96SL4 187 aaPredicted RBP5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 SLC30A2Q9BRI3 323 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 FNDC11Q9BVV2 318 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 NMNAT1Q9HAN9 279 aaPredicted RBP5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 MRGBPQ9NV56 204 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 CMTM6Q9NX76 183 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 RHCGQ9UBD6 479 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 IL20RAQ9UHF4 553 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 SIGLEC7Q9Y286 467 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 ADAM18Q9Y3Q7 739 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 WNK1Q9H4A3 2382 aa5.29□□□□□ -1.56
PRPF40A-210ENST00000489741 IGHV2-70DA0A0C4DH43 119 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 A0A1W2PRQ8 180 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 ELOVL7A1L3X0 281 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 IQCF6A8MYZ5 107 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 EFCAB9A8MZ26 197 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 H0YL77 283 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 H7C1C5 153 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 IMPA2O14732 288 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 TNFRSF13BO14836 293 aaPredicted RBP5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 MLNRO43193 412 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 DOK2O60496 412 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 IFNW1P05000 195 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 CDKN2AP42771 156 aaKnown RBP5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 YAP1P46937 504 aaKnown RBP5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 OMPP47874 163 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 HTR5AP47898 357 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 RGS6P49758 472 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 LCN6P62502 163 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 SSBP2P81877 361 aaPredicted RBP5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 AQP6Q13520 282 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 DGCR6Q14129 220 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 ZNF404Q494X3 552 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 LRRC23Q53EV4 343 aaPredicted RBP5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 PDLIM3Q53GG5 364 aaPredicted RBP5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 ESCO2Q56NI9 601 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 ARMCX4Q5H9R4 360 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 OR2T2Q6IF00 324 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 CGB2Q6NT52 195 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 C8orf82Q6P1X6 216 aaPredicted RBP5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 C16orf87Q6PH81 154 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 KLBQ86Z14 1044 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 MUC20Q8N307 709 aaPredicted RBP5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 OR52E2Q8NGJ4 325 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 OR13C2Q8NGS9 318 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 OR13G1Q8NGZ3 307 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 OR1F12Q8NHA8 337 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 SLC7A13Q8TCU3 470 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 LZICQ8WZA0 190 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 TAF15Q92804 592 aaKnown RBP eCLIP5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 RPL36ALQ969Q0 106 aaKnown RBP5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 SLC25A28Q96A46 364 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 RASD2Q96D21 266 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 TPD52L3Q96J77 140 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 TMEM246Q9BRR3 403 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 FUZQ9BT04 418 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 TMEM120AQ9BXJ8 343 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 ANKRD19PQ9H560 264 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 VIPAS39Q9H9C1 493 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 GID8Q9NWU2 228 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 GRHPRQ9UBQ7 328 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 MIOXQ9UGB7 285 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 AP3M1Q9Y2T2 418 aa5.28□□□□□ -1.56
PRPF40A-210ENST00000489741 IGLV1-36A0A0B4J1U3 117 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 DCTN6O00399 190 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 XKRYO14609 159 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 SLC22A2O15244 555 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 RER1O15258 196 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms