RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 METAP1DQ6UB28 335 aaPredicted RBP13.92□□□□□ -0.18
TOP3B-217ENST00000489581 DRAM2Q6UX65 266 aa13.92□□□□□ -0.18
TOP3B-217ENST00000489581 C11orf53Q8IXP5 236 aa13.92□□□□□ -0.18
TOP3B-217ENST00000489581 CMTM4Q8IZR5 234 aa13.92□□□□□ -0.18
TOP3B-217ENST00000489581 PNKDQ8N490 385 aa13.92□□□□□ -0.18
TOP3B-217ENST00000489581 FAM216BQ8N7L0 139 aa13.92□□□□□ -0.18
TOP3B-217ENST00000489581 OR8S1Q8NH09 359 aa13.92□□□□□ -0.18
TOP3B-217ENST00000489581 RP9Q8TA86 221 aaKnown RBP13.92□□□□□ -0.18
TOP3B-217ENST00000489581 DHRS1Q96LJ7 313 aa13.92□□□□□ -0.18
TOP3B-217ENST00000489581 KCTD14Q9BQ13 255 aaPredicted RBP13.92□□□□□ -0.18
TOP3B-217ENST00000489581 PPA2Q9H2U2 334 aa13.92□□□□□ -0.18
TOP3B-217ENST00000489581 ALX3O95076 343 aa13.91□□□□□ -0.18
TOP3B-217ENST00000489581 PAHP00439 452 aa13.91□□□□□ -0.18
TOP3B-217ENST00000489581 PSKH1P11801 424 aa13.91□□□□□ -0.18
TOP3B-217ENST00000489581 MUC1P15941 1255 aaPredicted RBP13.91□□□□□ -0.18
TOP3B-217ENST00000489581 OTX1P32242 354 aaPredicted RBP13.91□□□□□ -0.18
TOP3B-217ENST00000489581 CSNK2BP67870 215 aa13.91□□□□□ -0.18
TOP3B-217ENST00000489581 GUCA2AQ02747 115 aa13.91□□□□□ -0.18
TOP3B-217ENST00000489581 IKZF1Q13422 519 aa13.91□□□□□ -0.18
TOP3B-217ENST00000489581 KRT72Q14CN4 511 aa13.91□□□□□ -0.18
TOP3B-217ENST00000489581 LYPD4Q6UWN0 246 aa13.91□□□□□ -0.18
TOP3B-217ENST00000489581 Q6ZTK2 550 aa13.91□□□□□ -0.18
TOP3B-217ENST00000489581 SLC36A1Q7Z2H8 476 aa13.91□□□□□ -0.18
TOP3B-217ENST00000489581 WDR86Q86TI4 376 aa13.91□□□□□ -0.18
TOP3B-217ENST00000489581 FAM86B1Q8N7N1 296 aa13.91□□□□□ -0.18
TOP3B-217ENST00000489581 Q8N7P7 452 aa13.91□□□□□ -0.18
TOP3B-217ENST00000489581 C11orf44Q8N8P7 122 aa13.91□□□□□ -0.18
TOP3B-217ENST00000489581 ZNRF4Q8WWF5 429 aa13.91□□□□□ -0.18
TOP3B-217ENST00000489581 HOPXQ9BPY8 73 aaPredicted RBP13.91□□□□□ -0.18
TOP3B-217ENST00000489581 COPS4Q9BT78 406 aa13.91□□□□□ -0.18
TOP3B-217ENST00000489581 RNPEPL1Q9HAU8 725 aa13.91□□□□□ -0.18
TOP3B-217ENST00000489581 KCNG2Q9UJ96 466 aa13.91□□□□□ -0.18
TOP3B-217ENST00000489581 SIGLEC9Q9Y336 463 aa13.91□□□□□ -0.18
TOP3B-217ENST00000489581 MEIOCA2RUB1 952 aa13.9□□□□□ -0.18
TOP3B-217ENST00000489581 ANKRD30BLA7E2S9 258 aa13.9□□□□□ -0.18
TOP3B-217ENST00000489581 ACOT8O14734 319 aa13.9□□□□□ -0.18
TOP3B-217ENST00000489581 NDUFB3O43676 98 aa13.9□□□□□ -0.18
TOP3B-217ENST00000489581 OPN1MWP04001 364 aa13.9□□□□□ -0.18
TOP3B-217ENST00000489581 OPN1MW2P0DN77 364 aa13.9□□□□□ -0.18
TOP3B-217ENST00000489581 OPN1MW3P0DN78 364 aa13.9□□□□□ -0.18
TOP3B-217ENST00000489581 COX4I1P13073 169 aa13.9□□□□□ -0.18
TOP3B-217ENST00000489581 GABRA5P31644 462 aa13.9□□□□□ -0.18
TOP3B-217ENST00000489581 GRK5P34947 590 aa13.9□□□□□ -0.18
TOP3B-217ENST00000489581 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.9□□□□□ -0.18
TOP3B-217ENST00000489581 HERPUD1Q15011 391 aa13.9□□□□□ -0.18
TOP3B-217ENST00000489581 FAM189A2Q15884 450 aa13.9□□□□□ -0.18
TOP3B-217ENST00000489581 C8orf82Q6P1X6 216 aaPredicted RBP13.9□□□□□ -0.18
TOP3B-217ENST00000489581 Q6ZPA2 131 aa13.9□□□□□ -0.18
TOP3B-217ENST00000489581 DPY19L4Q7Z388 723 aa13.9□□□□□ -0.18
TOP3B-217ENST00000489581 DCXRQ7Z4W1 244 aa13.9□□□□□ -0.18
TOP3B-217ENST00000489581 GALNT4Q8N4A0 578 aa13.9□□□□□ -0.18
TOP3B-217ENST00000489581 CYB561A3Q8NBI2 242 aa13.9□□□□□ -0.18
TOP3B-217ENST00000489581 OR5T2Q8NGG2 359 aa13.9□□□□□ -0.18
TOP3B-217ENST00000489581 OR5R1Q8NH85 324 aa13.9□□□□□ -0.18
TOP3B-217ENST00000489581 H1FXQ92522 213 aaKnown RBP13.9□□□□□ -0.18
TOP3B-217ENST00000489581 DCTN5Q9BTE1 182 aa13.9□□□□□ -0.18
TOP3B-217ENST00000489581 CENPMQ9NSP4 180 aa13.9□□□□□ -0.18
TOP3B-217ENST00000489581 FBLN5Q9UBX5 448 aa13.9□□□□□ -0.18
TOP3B-217ENST00000489581 PRPF19Q9UMS4 504 aaKnown RBP13.9□□□□□ -0.18
TOP3B-217ENST00000489581 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.89□□□□□ -0.19
TOP3B-217ENST00000489581 SLC22A2O15244 555 aa13.89□□□□□ -0.19
TOP3B-217ENST00000489581 TBX1O43435 398 aa13.89□□□□□ -0.19
TOP3B-217ENST00000489581 IDH3BO43837 385 aa13.89□□□□□ -0.19
TOP3B-217ENST00000489581 GADD45GO95257 159 aa13.89□□□□□ -0.19
TOP3B-217ENST00000489581 SELLP14151 372 aa13.89□□□□□ -0.19
TOP3B-217ENST00000489581 AMY2BP19961 511 aa13.89□□□□□ -0.19
TOP3B-217ENST00000489581 SAA4P35542 130 aa13.89□□□□□ -0.19
TOP3B-217ENST00000489581 GMFBP60983 142 aa13.89□□□□□ -0.19
TOP3B-217ENST00000489581 SPIBQ01892 262 aa13.89□□□□□ -0.19
TOP3B-217ENST00000489581 TAF13Q15543 124 aa13.89□□□□□ -0.19
TOP3B-217ENST00000489581 SAMD5Q5TGI4 173 aa13.89□□□□□ -0.19
TOP3B-217ENST00000489581 GLYATQ6IB77 296 aa13.89□□□□□ -0.19
TOP3B-217ENST00000489581 WDR82Q6UXN9 313 aa13.89□□□□□ -0.19
TOP3B-217ENST00000489581 C1orf122Q6ZSJ8 110 aa13.89□□□□□ -0.19
TOP3B-217ENST00000489581 ZDHHC21Q8IVQ6 265 aa13.89□□□□□ -0.19
TOP3B-217ENST00000489581 PROKR2Q8NFJ6 384 aa13.89□□□□□ -0.19
TOP3B-217ENST00000489581 OR1M1Q8NGA1 313 aa13.89□□□□□ -0.19
TOP3B-217ENST00000489581 OR51L1Q8NGJ5 315 aa13.89□□□□□ -0.19
TOP3B-217ENST00000489581 KCNJ15Q99712 375 aa13.89□□□□□ -0.19
TOP3B-217ENST00000489581 PPP1R3EQ9H7J1 279 aa13.89□□□□□ -0.19
TOP3B-217ENST00000489581 DCAF13Q9NV06 445 aaKnown RBP13.89□□□□□ -0.19
TOP3B-217ENST00000489581 FOXJ3Q9UPW0 622 aa13.89□□□□□ -0.19
TOP3B-217ENST00000489581 V9GYQ6 96 aa13.89□□□□□ -0.19
TOP3B-217ENST00000489581 PIN1P1O15428 100 aa13.88□□□□□ -0.19
TOP3B-217ENST00000489581 XRCC2O43543 280 aa13.88□□□□□ -0.19
TOP3B-217ENST00000489581 DDOSTP39656 456 aa13.88□□□□□ -0.19
TOP3B-217ENST00000489581 SMIM11AP58511 58 aa13.88□□□□□ -0.19
TOP3B-217ENST00000489581 LRRC10Q5BKY1 277 aa13.88□□□□□ -0.19
TOP3B-217ENST00000489581 KPRPQ5T749 579 aaPredicted RBP13.88□□□□□ -0.19
TOP3B-217ENST00000489581 HDXQ7Z353 690 aa13.88□□□□□ -0.19
TOP3B-217ENST00000489581 OR4C15Q8NGM1 316 aa13.88□□□□□ -0.19
TOP3B-217ENST00000489581 PPP1R35Q8TAP8 253 aa13.88□□□□□ -0.19
TOP3B-217ENST00000489581 TNFRSF14Q92956 283 aa13.88□□□□□ -0.19
TOP3B-217ENST00000489581 SLAMF6Q96DU3 332 aa13.88□□□□□ -0.19
TOP3B-217ENST00000489581 DMRTB1Q96MA1 342 aa13.88□□□□□ -0.19
TOP3B-217ENST00000489581 OPA3Q9H6K4 179 aa13.88□□□□□ -0.19
TOP3B-217ENST00000489581 EFCAB1Q9HAE3 211 aa13.88□□□□□ -0.19
TOP3B-217ENST00000489581 SNTG1Q9NSN8 517 aa13.88□□□□□ -0.19
TOP3B-217ENST00000489581 SAMD4AQ9UPU9 718 aaKnown RBP13.88□□□□□ -0.19
TOP3B-217ENST00000489581 H3BUX3 64 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms