RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 DBHP09172 617 aa9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 ZNF182P17025 639 aaPredicted RBP9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 GALP22466 123 aa9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 NR4A2P43354 598 aa9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 TAS2R43P59537 309 aa9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 NANOS3P60323 173 aaKnown RBP9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 PCBD1P61457 104 aa9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 MFGE8Q08431 387 aaPredicted RBP9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 SCRN3Q0VDG4 424 aa9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 ZNF846Q147U1 533 aa9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 TRAM1Q15629 374 aa9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 CARTPTQ16568 116 aa9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 TBC1D28Q2M2D7 210 aa9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 LIPNQ5VXI9 398 aa9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 DEGS2Q6QHC5 323 aa9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 OR2AJ1Q8NGZ0 328 aa9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 GATAD2BQ8WXI9 593 aa9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 UFD1Q92890 307 aa9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 POM121L2Q96KW2 1035 aa9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 OPALINQ96PE5 141 aa9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 ATF6BQ99941 703 aa9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 CDADC1Q9BWV3 514 aa9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 MRPL37Q9BZE1 423 aaKnown RBP9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 NAA50Q9GZZ1 169 aaKnown RBP9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 HDHD2Q9H0R4 259 aa9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 MS4A5Q9H3V2 200 aa9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 ELOVL3Q9HB03 270 aa9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 FAM206AQ9NX38 181 aa9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 PLEK2Q9NYT0 353 aa9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 ATPIF1Q9UII2 106 aa9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 STUB1Q9UNE7 303 aa9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 ARFGEF3Q5TH69 2177 aa9.04□□□□□ -0.96
SCAMP4-208ENST00000489554 PNMA8CA0A1B0GUJ8 204 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 J3QLW9 94 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 ZNF254O75437 659 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 COX5BP10606 129 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 DAOP14920 347 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 CPEP16870 476 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 ZNF19P17023 458 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 GIFP27352 417 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 APEX1P27695 318 aaKnown RBP9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 DCTDP32321 178 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 S100A5P33763 92 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 APLNRP35414 380 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 TGFBR2P37173 567 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 LIPAP38571 399 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 PSMB10P40306 273 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 RAD52P43351 418 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 KIR3DL2P43630 455 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 GZMKP49863 264 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 SELENOVP59797 346 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 ACTA2P62736 377 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 ACTG2P63267 376 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 TPBGQ13641 420 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 TSTQ16762 297 aaKnown RBP9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 MSMPQ1L6U9 139 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 CYB5R2Q6BCY4 276 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 RGS7BPQ6MZT1 257 aaPredicted RBP9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 FDX2Q6P4F2 183 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 KCTD18Q6PI47 426 aaPredicted RBP9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 KCTD20Q7Z5Y7 419 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 NAA40Q86UY6 237 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 KLBQ86Z14 1044 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 PRSS35Q8N3Z0 413 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 PAQR4Q8N4S7 273 aaPredicted RBP9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 OR1F12Q8NHA8 337 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 TBC1D15Q8TC07 691 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 SNX33Q8WV41 574 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 KCNJ15Q99712 375 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 SYT3Q9BQG1 590 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 BCL2L14Q9BZR8 327 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 DCSTAMPQ9H295 470 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 G6PC2Q9NQR9 355 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 CENPMQ9NSP4 180 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 BABAM2Q9NXR7 383 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 CCDC59Q9P031 241 aaKnown RBP9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 GPR160Q9UJ42 338 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 GNG8Q9UK08 70 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 IKZF2Q9UKS7 526 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 CR1P17927 2039 aa9.03□□□□□ -0.96
SCAMP4-208ENST00000489554 CLDN25C9JDP6 229 aa9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 OGG1O15527 345 aa9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 MT-ND5P03915 603 aa9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 KRT8P05787 483 aa9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 H2BFMP0C1H6 154 aa9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 ACSM4P0C7M7 580 aa9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 FAM157BP0CG42 384 aa9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 CCL2P13500 99 aa9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 WNT5AP41221 380 aa9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 HTR5AP47898 357 aa9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 UCP2P55851 309 aa9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 PSMA6P60900 246 aaKnown RBP9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 VBP1P61758 197 aa9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 SPCS2Q15005 226 aa9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 SSX1Q16384 188 aa9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 DMKNQ6E0U4 476 aaPredicted RBP9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 UNQ6126/PRO20091Q6UXV3 157 aa9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 COLCA1Q6ZS62 124 aa9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 KRT77Q7Z794 578 aa9.02□□□□□ -0.97
SCAMP4-208ENST00000489554 CATSPERDQ86XM0 798 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms