RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 C11orf91Q3C1V1 193 aa10.22□□□□□ -0.77
CPSF3-204ENST00000489403 VMO1Q7Z5L0 202 aa10.22□□□□□ -0.77
CPSF3-204ENST00000489403 C11orf53Q8IXP5 236 aa10.22□□□□□ -0.77
CPSF3-204ENST00000489403 SCCPDHQ8NBX0 429 aa10.22□□□□□ -0.77
CPSF3-204ENST00000489403 OR4C15Q8NGM1 316 aa10.22□□□□□ -0.77
CPSF3-204ENST00000489403 OR8D4Q8NGM9 314 aa10.22□□□□□ -0.77
CPSF3-204ENST00000489403 OR9Q1Q8NGQ5 310 aa10.22□□□□□ -0.77
CPSF3-204ENST00000489403 SPSB4Q96A44 273 aa10.22□□□□□ -0.77
CPSF3-204ENST00000489403 MCUR1Q96AQ8 359 aa10.22□□□□□ -0.77
CPSF3-204ENST00000489403 SLAMF6Q96DU3 332 aa10.22□□□□□ -0.77
CPSF3-204ENST00000489403 KCNJ15Q99712 375 aa10.22□□□□□ -0.77
CPSF3-204ENST00000489403 RBM4BQ9BQ04 359 aaKnown RBP10.22□□□□□ -0.77
CPSF3-204ENST00000489403 BTBD10Q9BSF8 475 aa10.22□□□□□ -0.77
CPSF3-204ENST00000489403 CNTD2Q9H8S5 307 aa10.22□□□□□ -0.77
CPSF3-204ENST00000489403 IL1RAPQ9NPH3 570 aa10.22□□□□□ -0.77
CPSF3-204ENST00000489403 C14orf119Q9NWQ9 140 aa10.22□□□□□ -0.77
CPSF3-204ENST00000489403 RPUSD1Q9UJJ7 312 aaKnown RBP10.22□□□□□ -0.77
CPSF3-204ENST00000489403 N6AMT1Q9Y5N5 214 aa10.22□□□□□ -0.77
CPSF3-204ENST00000489403 KPTNQ9Y664 436 aa10.22□□□□□ -0.77
CPSF3-204ENST00000489403 VWFP04275 2813 aa10.21□□□□□ -0.77
CPSF3-204ENST00000489403 ZNF878C9JN71 531 aa10.21□□□□□ -0.77
CPSF3-204ENST00000489403 ARPC2O15144 300 aa10.21□□□□□ -0.77
CPSF3-204ENST00000489403 ECDO95905 644 aaPredicted RBP10.21□□□□□ -0.77
CPSF3-204ENST00000489403 GYPBP06028 91 aa10.21□□□□□ -0.77
CPSF3-204ENST00000489403 HSD17B1P14061 328 aa10.21□□□□□ -0.77
CPSF3-204ENST00000489403 ENTPD1P49961 510 aa10.21□□□□□ -0.77
CPSF3-204ENST00000489403 CDONQ4KMG0 1287 aa10.21□□□□□ -0.77
CPSF3-204ENST00000489403 WDR38Q5JTN6 314 aa10.21□□□□□ -0.77
CPSF3-204ENST00000489403 RPL13AP3Q6NVV1 102 aa10.21□□□□□ -0.77
CPSF3-204ENST00000489403 ZNF511Q8NB15 262 aa10.21□□□□□ -0.77
CPSF3-204ENST00000489403 LY6G5BQ8NDX9 201 aa10.21□□□□□ -0.77
CPSF3-204ENST00000489403 OR8S1Q8NH09 359 aa10.21□□□□□ -0.77
CPSF3-204ENST00000489403 LRRC29Q8WV35 223 aa10.21□□□□□ -0.77
CPSF3-204ENST00000489403 NSMCE2Q96MF7 247 aa10.21□□□□□ -0.77
CPSF3-204ENST00000489403 CCL13Q99616 98 aa10.21□□□□□ -0.77
CPSF3-204ENST00000489403 ELAC2Q9BQ52 826 aaKnown RBP10.21□□□□□ -0.77
CPSF3-204ENST00000489403 SEMA6AQ9H2E6 1030 aa10.21□□□□□ -0.77
CPSF3-204ENST00000489403 PPP1R3EQ9H7J1 279 aa10.21□□□□□ -0.77
CPSF3-204ENST00000489403 RNPEPL1Q9HAU8 725 aa10.21□□□□□ -0.77
CPSF3-204ENST00000489403 CENPMQ9NSP4 180 aa10.21□□□□□ -0.77
CPSF3-204ENST00000489403 IL20Q9NYY1 176 aa10.21□□□□□ -0.77
CPSF3-204ENST00000489403 CD300AQ9UGN4 299 aa10.21□□□□□ -0.77
CPSF3-204ENST00000489403 LYVE1Q9Y5Y7 322 aa10.21□□□□□ -0.77
CPSF3-204ENST00000489403 A0A0G2JK05 382 aa10.2□□□□□ -0.78
CPSF3-204ENST00000489403 A0A1B0GVI7 797 aa10.2□□□□□ -0.78
CPSF3-204ENST00000489403 ANKRD30BLA7E2S9 258 aa10.2□□□□□ -0.78
CPSF3-204ENST00000489403 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.2□□□□□ -0.78
CPSF3-204ENST00000489403 TBX1O43435 398 aa10.2□□□□□ -0.78
CPSF3-204ENST00000489403 CLUP10909 449 aa10.2□□□□□ -0.78
CPSF3-204ENST00000489403 FMO3P31513 532 aa10.2□□□□□ -0.78
CPSF3-204ENST00000489403 GRK5P34947 590 aa10.2□□□□□ -0.78
CPSF3-204ENST00000489403 DDOSTP39656 456 aa10.2□□□□□ -0.78
CPSF3-204ENST00000489403 CX3CR1P49238 355 aa10.2□□□□□ -0.78
CPSF3-204ENST00000489403 CSNK2BP67870 215 aa10.2□□□□□ -0.78
CPSF3-204ENST00000489403 FAM3AP98173 230 aa10.2□□□□□ -0.78
CPSF3-204ENST00000489403 CRMP1Q14194 572 aa10.2□□□□□ -0.78
CPSF3-204ENST00000489403 TAF13Q15543 124 aa10.2□□□□□ -0.78
CPSF3-204ENST00000489403 TAF9Q16594 264 aa10.2□□□□□ -0.78
CPSF3-204ENST00000489403 MICBQ29980 383 aa10.2□□□□□ -0.78
CPSF3-204ENST00000489403 Q6ZSV7 163 aa10.2□□□□□ -0.78
CPSF3-204ENST00000489403 SLC16A9Q7RTY1 509 aa10.2□□□□□ -0.78
CPSF3-204ENST00000489403 DPY19L4Q7Z388 723 aa10.2□□□□□ -0.78
CPSF3-204ENST00000489403 FAM216BQ8N7L0 139 aa10.2□□□□□ -0.78
CPSF3-204ENST00000489403 ZSCAN4Q8NAM6 433 aaPredicted RBP10.2□□□□□ -0.78
CPSF3-204ENST00000489403 OR1M1Q8NGA1 313 aa10.2□□□□□ -0.78
CPSF3-204ENST00000489403 SEH1LQ96EE3 360 aa10.2□□□□□ -0.78
CPSF3-204ENST00000489403 DPAGT1Q9H3H5 408 aa10.2□□□□□ -0.78
CPSF3-204ENST00000489403 SIRT7Q9NRC8 400 aa10.2□□□□□ -0.78
CPSF3-204ENST00000489403 TBC1D23Q9NUY8 699 aa10.2□□□□□ -0.78
CPSF3-204ENST00000489403 ZNRD1Q9P1U0 126 aa10.2□□□□□ -0.78
CPSF3-204ENST00000489403 ONECUT1Q9UBC0 465 aa10.2□□□□□ -0.78
CPSF3-204ENST00000489403 TGP01266 2768 aa10.2□□□□□ -0.78
CPSF3-204ENST00000489403 WNK1Q9H4A3 2382 aa10.19□□□□□ -0.78
CPSF3-204ENST00000489403 hCG_38984A0A1B0GV85 526 aa10.19□□□□□ -0.78
CPSF3-204ENST00000489403 DHRS12A0PJE2 317 aa10.19□□□□□ -0.78
CPSF3-204ENST00000489403 TNFRSF11BO00300 401 aa10.19□□□□□ -0.78
CPSF3-204ENST00000489403 ZNF593O00488 134 aaPredicted RBP10.19□□□□□ -0.78
CPSF3-204ENST00000489403 ACOT8O14734 319 aa10.19□□□□□ -0.78
CPSF3-204ENST00000489403 TSPAN15O95858 294 aa10.19□□□□□ -0.78
CPSF3-204ENST00000489403 GASTP01350 101 aa10.19□□□□□ -0.78
CPSF3-204ENST00000489403 ANXA2P07355 339 aaKnown RBP10.19□□□□□ -0.78
CPSF3-204ENST00000489403 MUC1P15941 1255 aaPredicted RBP10.19□□□□□ -0.78
CPSF3-204ENST00000489403 SPI1P17947 270 aa10.19□□□□□ -0.78
CPSF3-204ENST00000489403 AMY2BP19961 511 aa10.19□□□□□ -0.78
CPSF3-204ENST00000489403 HMGA2P52926 109 aa10.19□□□□□ -0.78
CPSF3-204ENST00000489403 DLX1P56177 255 aa10.19□□□□□ -0.78
CPSF3-204ENST00000489403 GRB2P62993 217 aaKnown RBP10.19□□□□□ -0.78
CPSF3-204ENST00000489403 PRB3Q04118 309 aaPredicted RBP10.19□□□□□ -0.78
CPSF3-204ENST00000489403 TIGD6Q17RP2 521 aa10.19□□□□□ -0.78
CPSF3-204ENST00000489403 KLHL12Q53G59 568 aa10.19□□□□□ -0.78
CPSF3-204ENST00000489403 TEX30Q5JUR7 227 aa10.19□□□□□ -0.78
CPSF3-204ENST00000489403 SAMD4BQ5PRF9 694 aaKnown RBP10.19□□□□□ -0.78
CPSF3-204ENST00000489403 ZNF770Q6IQ21 691 aaPredicted RBP10.19□□□□□ -0.78
CPSF3-204ENST00000489403 METAP1DQ6UB28 335 aaPredicted RBP10.19□□□□□ -0.78
CPSF3-204ENST00000489403 WDR82Q6UXN9 313 aa10.19□□□□□ -0.78
CPSF3-204ENST00000489403 GDPGP1Q6ZNW5 385 aa10.19□□□□□ -0.78
CPSF3-204ENST00000489403 RASSF6Q6ZTQ3 369 aa10.19□□□□□ -0.78
CPSF3-204ENST00000489403 PGAM4Q8N0Y7 254 aa10.19□□□□□ -0.78
CPSF3-204ENST00000489403 OR4Q3Q8NH05 313 aa10.19□□□□□ -0.78
CPSF3-204ENST00000489403 LRTOMTQ8WZ04 291 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms