RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 B4GALT7Q9UBV7 327 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 ATPIF1Q9UII2 106 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 SCP2D1Q9UJQ7 156 aa7.45□□□□□ -1.22
VTI1A-207ENST00000489357 BAHCC1Q9P281 2608 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 A0A1B0GTI1 187 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 UBE2QL1A1L167 161 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 DHHO43323 396 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 CEACAM4O75871 244 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 RGS11O94810 467 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 WNT11O96014 354 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 CD74P04233 296 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 PRB1P04280 392 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 SFTPCP11686 197 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 ENPP1P22413 925 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 GNALP38405 381 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 CCR6P51684 374 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 NKX2-5P52952 324 aaPredicted RBP7.44□□□□□ -1.22
VTI1A-207ENST00000489357 SOX8P57073 446 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 B3GALT5-AS1P59052 145 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 PCBD1P61457 104 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 RPS18P62269 152 aaKnown RBP7.44□□□□□ -1.22
VTI1A-207ENST00000489357 IKZF1Q13422 519 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 INPP5JQ15735 1006 aaPredicted RBP7.44□□□□□ -1.22
VTI1A-207ENST00000489357 MPPED2Q15777 294 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 TBR1Q16650 682 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 ODF4Q2M2E3 257 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 ZNF626Q68DY1 528 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 ABLIM2Q6H8Q1 611 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 RTL6Q6ICC9 239 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 UTS2BQ765I0 119 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.44□□□□□ -1.22
VTI1A-207ENST00000489357 GLCCI1Q86VQ1 547 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 LSRQ86X29 649 aaPredicted RBP7.44□□□□□ -1.22
VTI1A-207ENST00000489357 IZUMO1Q8IYV9 350 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 GPR137CQ8N3F9 429 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 JAGN1Q8N5M9 183 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 PNLDC1Q8NA58 520 aaKnown RBP7.44□□□□□ -1.22
VTI1A-207ENST00000489357 KCNG3Q8TAE7 436 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 CPT1CQ8TCG5 803 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 SPTSSAQ969W0 71 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 FAM46BQ96A09 425 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 TMEM45BQ96B21 275 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 DNAJA3Q96EY1 480 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 FOXN4Q96NZ1 517 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 GNRHR2Q96P88 292 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 FAM173AQ9BQD7 235 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 TMEM246Q9BRR3 403 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 TMEM185BQ9H7F4 350 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 ZFP64Q9NPA5 681 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 P4HTMQ9NXG6 502 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 TUBD1Q9UJT1 453 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 RHBDD3Q9Y3P4 386 aa7.44□□□□□ -1.22
VTI1A-207ENST00000489357 FASNP49327 2511 aaKnown RBP7.44□□□□□ -1.22
VTI1A-207ENST00000489357 BSNQ9UPA5 3926 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 TRAV18A0A075B6X5 111 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 ZNF814B7Z6K7 855 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 H0YC42 278 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 P2RY10O00398 339 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 SSNA1O43805 119 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 GMDSO60547 372 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 CYB5AP00167 134 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 CELA2AP08217 269 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 CST2P09228 141 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 GIPP09681 153 aaPredicted RBP7.43□□□□□ -1.22
VTI1A-207ENST00000489357 PRF1P14222 555 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 OTX2P32243 289 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 THBS4P35443 961 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 ZNF93P35789 620 aaPredicted RBP7.43□□□□□ -1.22
VTI1A-207ENST00000489357 CD96P40200 585 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 CBX5P45973 191 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 CX3CR1P49238 355 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 CARD18P57730 90 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 ZNF121P58317 390 aaPredicted RBP7.43□□□□□ -1.22
VTI1A-207ENST00000489357 RAP2BP61225 183 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 QRFPP83859 136 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 SCRN3Q0VDG4 424 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 PMPCAQ10713 525 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 AIMP2Q13155 320 aaKnown RBP7.43□□□□□ -1.22
VTI1A-207ENST00000489357 PPA1Q15181 289 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 RAB35Q15286 201 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 SF3B4Q15427 424 aaKnown RBP eCLIP7.43□□□□□ -1.22
VTI1A-207ENST00000489357 FCN2Q15485 313 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 PNLIPRP3Q17RR3 467 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 ACTBL2Q562R1 376 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 ATP1A1-AS1Q5TC04 95 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 STEAP1BQ6NZ63 245 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 TMEM53Q6P2H8 277 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 CORO6Q6QEF8 472 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 DRAM2Q6UX65 266 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 MDGA2Q7Z553 956 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 DTX3Q8N9I9 347 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 OR11H7Q8NGC8 314 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 OR1J2Q8NGS2 313 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 OR2V1Q8NHB1 315 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 OR14L1PQ8NHC6 308 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 AQP3Q92482 292 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 NABP1Q96AH0 204 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 FGGYQ96C11 551 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 SEH1LQ96EE3 360 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 WDR89Q96FK6 387 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms