RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 DTX3Q8N9I9 347 aa13.14□□□□□ -0.31
USP48-210ENST00000489108 SLC26A10Q8NG04 563 aa13.14□□□□□ -0.31
USP48-210ENST00000489108 LZICQ8WZA0 190 aa13.14□□□□□ -0.31
USP48-210ENST00000489108 PARD6BQ9BYG5 372 aa13.14□□□□□ -0.31
USP48-210ENST00000489108 NDEL1Q9GZM8 345 aa13.14□□□□□ -0.31
USP48-210ENST00000489108 METTL8Q9H825 291 aaKnown RBP13.14□□□□□ -0.31
USP48-210ENST00000489108 ZNF702PQ9H963 129 aa13.14□□□□□ -0.31
USP48-210ENST00000489108 RNPEPL1Q9HAU8 725 aa13.14□□□□□ -0.31
USP48-210ENST00000489108 C14orf119Q9NWQ9 140 aa13.14□□□□□ -0.31
USP48-210ENST00000489108 B9D1Q9UPM9 204 aa13.14□□□□□ -0.31
USP48-210ENST00000489108 SF3B6Q9Y3B4 125 aaKnown RBP13.14□□□□□ -0.31
USP48-210ENST00000489108 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.13□□□□□ -0.31
USP48-210ENST00000489108 M0R135 149 aa13.13□□□□□ -0.31
USP48-210ENST00000489108 BHLHE40O14503 412 aa13.13□□□□□ -0.31
USP48-210ENST00000489108 MZT1Q08AG7 82 aa13.13□□□□□ -0.31
USP48-210ENST00000489108 CYLC2Q14093 348 aaPredicted RBP13.13□□□□□ -0.31
USP48-210ENST00000489108 GLYATL3Q5SZD4 288 aa13.13□□□□□ -0.31
USP48-210ENST00000489108 WDR86Q86TI4 376 aa13.13□□□□□ -0.31
USP48-210ENST00000489108 OR6V1Q8N148 313 aa13.13□□□□□ -0.31
USP48-210ENST00000489108 OR2AJ1Q8NGZ0 328 aa13.13□□□□□ -0.31
USP48-210ENST00000489108 PIFOQ8TCI5 191 aa13.13□□□□□ -0.31
USP48-210ENST00000489108 WIPF2Q8TF74 440 aaPredicted RBP13.13□□□□□ -0.31
USP48-210ENST00000489108 TSPEARQ8WU66 669 aa13.13□□□□□ -0.31
USP48-210ENST00000489108 ZNF799Q96GE5 643 aa13.13□□□□□ -0.31
USP48-210ENST00000489108 SIGLEC7Q9Y286 467 aa13.13□□□□□ -0.31
USP48-210ENST00000489108 M0R1W7 72 aa13.12□□□□□ -0.31
USP48-210ENST00000489108 TFF1P04155 84 aa13.12□□□□□ -0.31
USP48-210ENST00000489108 GRK5P34947 590 aa13.12□□□□□ -0.31
USP48-210ENST00000489108 BMXP51813 675 aa13.12□□□□□ -0.31
USP48-210ENST00000489108 CSNK2BP67870 215 aa13.12□□□□□ -0.31
USP48-210ENST00000489108 AANATQ16613 207 aa13.12□□□□□ -0.31
USP48-210ENST00000489108 RFX4Q33E94 735 aa13.12□□□□□ -0.31
USP48-210ENST00000489108 ATPAF1Q5TC12 328 aaPredicted RBP13.12□□□□□ -0.31
USP48-210ENST00000489108 ERICH5Q6P6B1 374 aa13.12□□□□□ -0.31
USP48-210ENST00000489108 DNM1P34Q6PK57 102 aa13.12□□□□□ -0.31
USP48-210ENST00000489108 WDR82Q6UXN9 313 aa13.12□□□□□ -0.31
USP48-210ENST00000489108 RRM2BQ7LG56 351 aa13.12□□□□□ -0.31
USP48-210ENST00000489108 DPY19L4Q7Z388 723 aa13.12□□□□□ -0.31
USP48-210ENST00000489108 VTCN1Q7Z7D3 282 aa13.12□□□□□ -0.31
USP48-210ENST00000489108 PAPD5Q8NDF8 572 aaKnown RBP13.12□□□□□ -0.31
USP48-210ENST00000489108 OR56B2PQ8NGI1 322 aa13.12□□□□□ -0.31
USP48-210ENST00000489108 OR9Q1Q8NGQ5 310 aa13.12□□□□□ -0.31
USP48-210ENST00000489108 DUS3LQ96G46 650 aaKnown RBP13.12□□□□□ -0.31
USP48-210ENST00000489108 FAM46AQ96IP4 442 aaKnown RBP13.12□□□□□ -0.31
USP48-210ENST00000489108 GPX7Q96SL4 187 aaPredicted RBP13.12□□□□□ -0.31
USP48-210ENST00000489108 SH3GL1Q99961 368 aa13.12□□□□□ -0.31
USP48-210ENST00000489108 OCSTAMPQ9BR26 566 aa13.12□□□□□ -0.31
USP48-210ENST00000489108 CYB5R1Q9UHQ9 305 aa13.12□□□□□ -0.31
USP48-210ENST00000489108 A0A1W2PQ09 198 aa13.11□□□□□ -0.31
USP48-210ENST00000489108 A0A1W2PRX2 142 aa13.11□□□□□ -0.31
USP48-210ENST00000489108 ANGPTL7O43827 346 aa13.11□□□□□ -0.31
USP48-210ENST00000489108 TXNDC12O95881 172 aa13.11□□□□□ -0.31
USP48-210ENST00000489108 IFNW1P05000 195 aa13.11□□□□□ -0.31
USP48-210ENST00000489108 FXYD6P3P58550 94 aa13.11□□□□□ -0.31
USP48-210ENST00000489108 GMFBP60983 142 aa13.11□□□□□ -0.31
USP48-210ENST00000489108 BLMHQ13867 455 aa13.11□□□□□ -0.31
USP48-210ENST00000489108 Q8N2B8 174 aa13.11□□□□□ -0.31
USP48-210ENST00000489108 OR1M1Q8NGA1 313 aa13.11□□□□□ -0.31
USP48-210ENST00000489108 OR8S1Q8NH09 359 aa13.11□□□□□ -0.31
USP48-210ENST00000489108 MAP6Q96JE9 813 aa13.11□□□□□ -0.31
USP48-210ENST00000489108 OR5M11Q96RB7 305 aa13.11□□□□□ -0.31
USP48-210ENST00000489108 SNTG1Q9NSN8 517 aa13.11□□□□□ -0.31
USP48-210ENST00000489108 ZNF391Q9UJN7 358 aa13.11□□□□□ -0.31
USP48-210ENST00000489108 FAHP16930 419 aa13.1□□□□□ -0.31
USP48-210ENST00000489108 POU1F1P28069 291 aa13.1□□□□□ -0.31
USP48-210ENST00000489108 NAA10P41227 235 aaPredicted RBP13.1□□□□□ -0.31
USP48-210ENST00000489108 RPS6KA3P51812 740 aa13.1□□□□□ -0.31
USP48-210ENST00000489108 DGUOKQ16854 277 aa13.1□□□□□ -0.31
USP48-210ENST00000489108 SLC36A3Q495N2 470 aa13.1□□□□□ -0.31
USP48-210ENST00000489108 STUMQ69YW2 141 aa13.1□□□□□ -0.31
USP48-210ENST00000489108 DPY19L2P2Q6ZN68 376 aa13.1□□□□□ -0.31
USP48-210ENST00000489108 LIAT1Q6ZQX7 453 aa13.1□□□□□ -0.31
USP48-210ENST00000489108 OR8J3Q8NGG0 315 aa13.1□□□□□ -0.31
USP48-210ENST00000489108 SPTSSAQ969W0 71 aa13.1□□□□□ -0.31
USP48-210ENST00000489108 C12orf43Q96C57 262 aaKnown RBP13.1□□□□□ -0.31
USP48-210ENST00000489108 TLCD1Q96CP7 247 aa13.1□□□□□ -0.31
USP48-210ENST00000489108 DDOQ99489 341 aa13.1□□□□□ -0.31
USP48-210ENST00000489108 B9D2Q9BPU9 175 aa13.1□□□□□ -0.31
USP48-210ENST00000489108 HAO2Q9NYQ3 351 aa13.1□□□□□ -0.31
USP48-210ENST00000489108 SLC25A10Q9UBX3 287 aaPredicted RBP13.1□□□□□ -0.31
USP48-210ENST00000489108 TMEM5Q9Y2B1 443 aa13.1□□□□□ -0.31
USP48-210ENST00000489108 N6AMT1Q9Y5N5 214 aa13.1□□□□□ -0.31
USP48-210ENST00000489108 ANKRD30BLA7E2S9 258 aa13.09□□□□□ -0.31
USP48-210ENST00000489108 H0YAE9 185 aa13.09□□□□□ -0.31
USP48-210ENST00000489108 FXYD1O00168 92 aa13.09□□□□□ -0.31
USP48-210ENST00000489108 CDIPTO14735 213 aa13.09□□□□□ -0.31
USP48-210ENST00000489108 HLA-DQA2P01906 255 aa13.09□□□□□ -0.31
USP48-210ENST00000489108 NDUFB7P17568 137 aa13.09□□□□□ -0.31
USP48-210ENST00000489108 GSK3BP49841 420 aa13.09□□□□□ -0.31
USP48-210ENST00000489108 ZNF788Q6ZQV5 615 aa13.09□□□□□ -0.31
USP48-210ENST00000489108 ERMAPQ96PL5 475 aaPredicted RBP13.09□□□□□ -0.31
USP48-210ENST00000489108 GAFA1Q96PS6 74 aa13.09□□□□□ -0.31
USP48-210ENST00000489108 NMNAT3Q96T66 252 aa13.09□□□□□ -0.31
USP48-210ENST00000489108 WNT10AQ9GZT5 417 aa13.09□□□□□ -0.31
USP48-210ENST00000489108 WDR13Q9H1Z4 485 aa13.09□□□□□ -0.31
USP48-210ENST00000489108 PPP1R3EQ9H7J1 279 aa13.09□□□□□ -0.31
USP48-210ENST00000489108 PEX14O75381 377 aa13.08□□□□□ -0.32
USP48-210ENST00000489108 TROVE2P10155 538 aaKnown RBP eCLIP13.08□□□□□ -0.32
USP48-210ENST00000489108 RAB13P51153 203 aa13.08□□□□□ -0.32
USP48-210ENST00000489108 DRAM2Q6UX65 266 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms