RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 XKR4Q5GH76 650 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 SAPCD1Q5SSQ6 148 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 NANOGP8Q6NSW7 305 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 UGT2A3Q6UWM9 527 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 PID1Q7Z2X4 250 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 FAM122BQ7Z309 247 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 HDDC2Q7Z4H3 204 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 CROCCP2Q86T23 111 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 BBS7Q8IWZ6 715 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 C17orf78Q8N4C9 275 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 INO80EQ8NBZ0 244 aaPredicted RBP2.45□□□□□ -2.02
SSR1-209ENST00000488834 CATSPER1Q8NEC5 780 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 OR4F6Q8NGB9 312 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 OR52H1Q8NGJ2 320 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 PLPPR1Q8TBJ4 325 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 ARPC1AQ92747 370 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 YIPF5Q969M3 257 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.45□□□□□ -2.02
SSR1-209ENST00000488834 FAM131CQ96AQ9 280 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 TLCD1Q96CP7 247 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 CPB2Q96IY4 423 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 ZNF514Q96K75 400 aaPredicted RBP2.45□□□□□ -2.02
SSR1-209ENST00000488834 CSPG4P5Q96PW8 444 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 CNN2Q99439 309 aaKnown RBP2.45□□□□□ -2.02
SSR1-209ENST00000488834 ECSITQ9BQ95 431 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 MED10Q9BTT4 135 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 MRPS26Q9BYN8 205 aaKnown RBP2.45□□□□□ -2.02
SSR1-209ENST00000488834 OR11A1Q9GZK7 315 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 ARMC7Q9H6L4 198 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 GPATCH2LQ9NWQ4 482 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 NKIRAS1Q9NYS0 192 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 RSL24D1Q9UHA3 163 aaKnown RBP2.45□□□□□ -2.02
SSR1-209ENST00000488834 SCML1Q9UN30 329 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 ARL2BPQ9Y2Y0 163 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 ARHGEF11O15085 1522 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 USP47Q96K76 1375 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 RNF17Q9BXT8 1623 aaKnown RBP2.45□□□□□ -2.02
SSR1-209ENST00000488834 DENND4BO75064 1496 aaPredicted RBP2.45□□□□□ -2.02
SSR1-209ENST00000488834 IQSEC2Q5JU85 1478 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 MRC2Q9UBG0 1479 aa2.45□□□□□ -2.02
SSR1-209ENST00000488834 ZC3H13Q5T200 1668 aaKnown RBP2.44□□□□□ -2.02
SSR1-209ENST00000488834 ADGBQ8N7X0 1667 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 DAPK1P53355 1430 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 N4BP2Q86UW6 1770 aaPredicted RBP2.44□□□□□ -2.02
SSR1-209ENST00000488834 GTF3C1Q12789 2109 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 A0A1B0GW15 77 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 CCDC160A6NGH7 325 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 TMEM210A6NLX4 147 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 LINC00587B1AMM8 73 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 FAM25AB3EWG3 89 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 FAM25CB3EWG5 89 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 FAM25GB3EWG6 89 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 H3BSA7 217 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 PGRMC1O00264 195 aaKnown RBP2.44□□□□□ -2.02
SSR1-209ENST00000488834 RFXANKO14593 260 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 AIM2O14862 343 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 ZBTB5O15062 677 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 COCHO43405 550 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 GMDSO60547 372 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 OR7A10O76100 309 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 SEMA3DO95025 777 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 TSPAN13O95857 204 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 IFNW1P05000 195 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 CHTF8P0CG12 524 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 CRISP2P16562 243 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 TCP1P17987 556 aaKnown RBP2.44□□□□□ -2.02
SSR1-209ENST00000488834 TCN1P20061 433 aaPredicted RBP2.44□□□□□ -2.02
SSR1-209ENST00000488834 UGT2B10P36537 528 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 MRPL19P49406 292 aaKnown RBP2.44□□□□□ -2.02
SSR1-209ENST00000488834 UBE2G2P60604 165 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 SPCS3P61009 180 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 RAB4BP61018 213 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 ERVK-25P63136 954 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 ACTA1P68133 377 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 MED21Q13503 144 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 PON2Q15165 354 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 PTPN20Q4JDL3 420 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 CARD16Q5EG05 197 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 SOHLH1Q5JUK2 328 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 C1orf220Q5T0J3 134 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 THEM4Q5T1C6 240 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 REEP3Q6NUK4 255 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 C1orf94Q6P1W5 598 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 C5orf46Q6UWT4 87 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 ZFP2Q6ZN57 461 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 MBOAT1Q6ZNC8 495 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 LINC00299Q6ZSB3 139 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 Q6ZSR3 168 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 SLC35D2Q76EJ3 337 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 COX15Q7KZN9 410 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 ASCL5Q7RTU5 278 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 ABHD12BQ7Z5M8 362 aaPredicted RBP2.44□□□□□ -2.02
SSR1-209ENST00000488834 SETD3Q86TU7 594 aaPredicted RBP2.44□□□□□ -2.02
SSR1-209ENST00000488834 CDKL3Q8IVW4 592 aaPredicted RBP2.44□□□□□ -2.02
SSR1-209ENST00000488834 H1FOOQ8IZA3 346 aaPredicted RBP2.44□□□□□ -2.02
SSR1-209ENST00000488834 C6orf223Q8N319 242 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 TRAM1L1Q8N609 369 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 C12orf29Q8N999 325 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 CYB561A3Q8NBI2 242 aa2.44□□□□□ -2.02
SSR1-209ENST00000488834 DUSP18Q8NEJ0 188 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms