RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 SKA3Q8IX90 412 aa16.83■□□□□ 0.28
CCM2-216ENST00000488727 ZNF454Q8N9F8 522 aa16.83■□□□□ 0.28
CCM2-216ENST00000488727 USB1Q9BQ65 265 aaKnown RBP16.83■□□□□ 0.28
CCM2-216ENST00000488727 SEC61A2Q9H9S3 476 aa16.83■□□□□ 0.28
CCM2-216ENST00000488727 SLC25A15Q9Y619 301 aa16.83■□□□□ 0.28
CCM2-216ENST00000488727 ALG5Q9Y673 324 aa16.83■□□□□ 0.28
CCM2-216ENST00000488727 A6NIN4 97 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 BTCP35070 178 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 SLC36A2Q495M3 483 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 NRN1LQ496H8 165 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 OTPQ5XKR4 325 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 LRRTM1Q86UE6 522 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 ZNF679Q8IYX0 411 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 PRSS35Q8N3Z0 413 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 GPR148Q8TDV2 347 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 AMELYQ99218 206 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 ABCG5Q9H222 651 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 TCF7L1Q9HCS4 588 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 NUFIP1Q9UHK0 495 aaKnown RBP16.82■□□□□ 0.28
CCM2-216ENST00000488727 N6AMT1Q9Y5N5 214 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 MPZL1O95297 269 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 CFPP27918 469 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 LAP3P28838 519 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 HOXC12P31275 282 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 KIR3DL2P43630 455 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 SCAND1P57086 179 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 PPA1Q15181 289 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 ZFP69Q49AA0 526 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 TEX30Q5JUR7 227 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 HES5Q5TA89 166 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 ALKBH2Q6NS38 261 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 DNM1P34Q6PK57 102 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 LRRN1Q6UXK5 716 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 GLB1L2Q8IW92 636 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 CMTM4Q8IZR5 234 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 ZNF676Q8N7Q3 588 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 DTX3Q8N9I9 347 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 FGFBP3Q8TAT2 258 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 ORAI1Q96D31 301 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 ITGB1BP2Q9UKP3 347 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 ETV7Q9Y603 341 aa16.82■□□□□ 0.28
CCM2-216ENST00000488727 INMT-MINDY4F8WBC2 141 aa16.81■□□□□ 0.28
CCM2-216ENST00000488727 HLA-HP01893 362 aa16.81■□□□□ 0.28
CCM2-216ENST00000488727 HLA-DQA2P01906 255 aa16.81■□□□□ 0.28
CCM2-216ENST00000488727 RPS27P42677 84 aaKnown RBP16.81■□□□□ 0.28
CCM2-216ENST00000488727 MAGEB1P43366 347 aa16.81■□□□□ 0.28
CCM2-216ENST00000488727 SGCAQ16586 387 aa16.81■□□□□ 0.28
CCM2-216ENST00000488727 WDR38Q5JTN6 314 aa16.81■□□□□ 0.28
CCM2-216ENST00000488727 HIST2H2BCQ6DN03 193 aa16.81■□□□□ 0.28
CCM2-216ENST00000488727 KCTD18Q6PI47 426 aaPredicted RBP16.81■□□□□ 0.28
CCM2-216ENST00000488727 WFDC8Q8IUA0 241 aa16.81■□□□□ 0.28
CCM2-216ENST00000488727 LRRC18Q8N456 261 aa16.81■□□□□ 0.28
CCM2-216ENST00000488727 UBASH3BQ8TF42 649 aa16.81■□□□□ 0.28
CCM2-216ENST00000488727 SMIM4Q8WVI0 70 aa16.81■□□□□ 0.28
CCM2-216ENST00000488727 MUCL1Q96DR8 90 aa16.81■□□□□ 0.28
CCM2-216ENST00000488727 SLC25A38Q96DW6 304 aa16.81■□□□□ 0.28
CCM2-216ENST00000488727 ELOVL3Q9HB03 270 aa16.81■□□□□ 0.28
CCM2-216ENST00000488727 PLEKHA1Q9HB21 404 aa16.81■□□□□ 0.28
CCM2-216ENST00000488727 NOX3Q9HBY0 568 aa16.81■□□□□ 0.28
CCM2-216ENST00000488727 AMDHD2Q9Y303 409 aa16.81■□□□□ 0.28
CCM2-216ENST00000488727 CRYBG3Q68DQ2 2970 aa16.8■□□□□ 0.28
CCM2-216ENST00000488727 CENPXA8MT69 81 aa16.8■□□□□ 0.28
CCM2-216ENST00000488727 TPPPO94811 219 aa16.8■□□□□ 0.28
CCM2-216ENST00000488727 PATE4P0C8F1 98 aa16.8■□□□□ 0.28
CCM2-216ENST00000488727 HOXB1P14653 301 aaPredicted RBP16.8■□□□□ 0.28
CCM2-216ENST00000488727 ADRA2CP18825 462 aa16.8■□□□□ 0.28
CCM2-216ENST00000488727 MNDAP41218 407 aa16.8■□□□□ 0.28
CCM2-216ENST00000488727 NKX2-5P52952 324 aaPredicted RBP16.8■□□□□ 0.28
CCM2-216ENST00000488727 UBE2NP61088 152 aaKnown RBP16.8■□□□□ 0.28
CCM2-216ENST00000488727 DGCR2P98153 550 aa16.8■□□□□ 0.28
CCM2-216ENST00000488727 GLO1Q04760 184 aa16.8■□□□□ 0.28
CCM2-216ENST00000488727 MEP1BQ16820 701 aa16.8■□□□□ 0.28
CCM2-216ENST00000488727 FAM27BQ5VT28 67 aa16.8■□□□□ 0.28
CCM2-216ENST00000488727 TCTE3Q8IZS6 198 aa16.8■□□□□ 0.28
CCM2-216ENST00000488727 SLC26A10Q8NG04 563 aa16.8■□□□□ 0.28
CCM2-216ENST00000488727 RAB40AQ8WXH6 277 aa16.8■□□□□ 0.28
CCM2-216ENST00000488727 C1QTNF6Q9BXI9 259 aa16.8■□□□□ 0.28
CCM2-216ENST00000488727 EMC7Q9NPA0 242 aa16.8■□□□□ 0.28
CCM2-216ENST00000488727 OBP2BQ9NPH6 170 aa16.8■□□□□ 0.28
CCM2-216ENST00000488727 B3GNT2Q9NY97 397 aa16.8■□□□□ 0.28
CCM2-216ENST00000488727 BAHCC1Q9P281 2608 aa16.79■□□□□ 0.28
CCM2-216ENST00000488727 SIAH2O43255 324 aa16.79■□□□□ 0.28
CCM2-216ENST00000488727 SULT1B1O43704 296 aa16.79■□□□□ 0.28
CCM2-216ENST00000488727 FARS2O95363 451 aaKnown RBP16.79■□□□□ 0.28
CCM2-216ENST00000488727 SPARCP09486 303 aa16.79■□□□□ 0.28
CCM2-216ENST00000488727 ARSBP15848 533 aa16.79■□□□□ 0.28
CCM2-216ENST00000488727 MSR1P21757 451 aa16.79■□□□□ 0.28
CCM2-216ENST00000488727 ADAM8P78325 824 aa16.79■□□□□ 0.28
CCM2-216ENST00000488727 DYRK1AQ13627 763 aa16.79■□□□□ 0.28
CCM2-216ENST00000488727 PCK2Q16822 640 aa16.79■□□□□ 0.28
CCM2-216ENST00000488727 TOMM5Q8N4H5 51 aa16.79■□□□□ 0.28
CCM2-216ENST00000488727 FAM222BQ8WU58 562 aa16.79■□□□□ 0.28
CCM2-216ENST00000488727 DPAGT1Q9H3H5 408 aa16.79■□□□□ 0.28
CCM2-216ENST00000488727 LIN7BQ9HAP6 207 aa16.79■□□□□ 0.28
CCM2-216ENST00000488727 COX6B1P14854 86 aa16.79■□□□□ 0.28
CCM2-216ENST00000488727 SOX2P48431 317 aa16.79■□□□□ 0.28
CCM2-216ENST00000488727 ENDOGQ14249 297 aaKnown RBP16.79■□□□□ 0.28
CCM2-216ENST00000488727 SLC16A14Q7RTX9 510 aa16.79■□□□□ 0.28
CCM2-216ENST00000488727 CCDC36Q8IYA8 594 aa16.79■□□□□ 0.28
CCM2-216ENST00000488727 C11orf40Q8WZ69 217 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms