RNA–Protein interactions for RNA: ENST00000487938.5

VIM-206, Transcript of vimentin, humanhuman

TSL 5

Gene VIM, Length 2,272 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-206ENST00000487938 SERPINF1P36955 418 aa15.84■□□□□ 0.13
VIM-206ENST00000487938 GSK3AP49840 483 aa15.84■□□□□ 0.13
VIM-206ENST00000487938 TFAP2EQ6VUC0 442 aa15.84■□□□□ 0.13
VIM-206ENST00000487938 MOB3CQ70IA8 216 aa15.84■□□□□ 0.13
VIM-206ENST00000487938 HOGA1Q86XE5 327 aa15.84■□□□□ 0.13
VIM-206ENST00000487938 INO80EQ8NBZ0 244 aaPredicted RBP15.84■□□□□ 0.13
VIM-206ENST00000487938 OR4K17Q8NGC6 315 aa15.84■□□□□ 0.13
VIM-206ENST00000487938 NPRL2Q8WTW4 380 aa15.84■□□□□ 0.13
VIM-206ENST00000487938 FBXW5Q969U6 566 aa15.84■□□□□ 0.13
VIM-206ENST00000487938 ARHGAP5-AS1Q96IT6 56 aa15.84■□□□□ 0.13
VIM-206ENST00000487938 BARX1Q9HBU1 254 aaPredicted RBP15.84■□□□□ 0.13
VIM-206ENST00000487938 WNT16Q9UBV4 365 aa15.84■□□□□ 0.13
VIM-206ENST00000487938 FBLN5Q9UBX5 448 aa15.84■□□□□ 0.13
VIM-206ENST00000487938 RTTNQ86VV8 2226 aa15.84■□□□□ 0.13
VIM-206ENST00000487938 TMEM265A0A087WTH1 108 aa15.84■□□□□ 0.13
VIM-206ENST00000487938 IGLV3-32A0A0A0MS00 114 aa15.84■□□□□ 0.13
VIM-206ENST00000487938 BET1O15155 118 aa15.84■□□□□ 0.13
VIM-206ENST00000487938 CELA2AP08217 269 aa15.84■□□□□ 0.13
VIM-206ENST00000487938 CLDN17P56750 224 aa15.84■□□□□ 0.13
VIM-206ENST00000487938 TERB2Q8NHR7 220 aa15.84■□□□□ 0.13
VIM-206ENST00000487938 KCNG3Q8TAE7 436 aa15.84■□□□□ 0.13
VIM-206ENST00000487938 LHFPL5Q8TAF8 219 aa15.84■□□□□ 0.13
VIM-206ENST00000487938 SLC22A8Q8TCC7 542 aa15.84■□□□□ 0.13
VIM-206ENST00000487938 LIN37Q96GY3 246 aaPredicted RBP15.84■□□□□ 0.13
VIM-206ENST00000487938 TMEM59Q9BXS4 323 aa15.84■□□□□ 0.13
VIM-206ENST00000487938 MOB1AQ9H8S9 216 aa15.84■□□□□ 0.13
VIM-206ENST00000487938 C12orf4Q9NQ89 552 aa15.84■□□□□ 0.13
VIM-206ENST00000487938 IGKV1-9A0A0C4DH69 117 aa15.83■□□□□ 0.13
VIM-206ENST00000487938 TRIM77I1YAP6 450 aa15.83■□□□□ 0.13
VIM-206ENST00000487938 HIST1H1DP16402 221 aaKnown RBP15.83■□□□□ 0.13
VIM-206ENST00000487938 RSPO4Q2I0M5 234 aaPredicted RBP15.83■□□□□ 0.13
VIM-206ENST00000487938 ZNF385CQ66K41 422 aaPredicted RBP15.83■□□□□ 0.13
VIM-206ENST00000487938 FAHD2BQ6P2I3 314 aaPredicted RBP15.83■□□□□ 0.13
VIM-206ENST00000487938 TMPPEQ6ZT21 453 aa15.83■□□□□ 0.13
VIM-206ENST00000487938 PGAP1Q75T13 922 aa15.83■□□□□ 0.13
VIM-206ENST00000487938 SPACA9Q96E40 222 aaPredicted RBP15.83■□□□□ 0.13
VIM-206ENST00000487938 FAHD2AQ96GK7 314 aa15.83■□□□□ 0.13
VIM-206ENST00000487938 GAREM1Q9H706 876 aa15.83■□□□□ 0.13
VIM-206ENST00000487938 SLC9A3R2Q15599 337 aa15.83■□□□□ 0.12
VIM-206ENST00000487938 C1QL2Q7Z5L3 287 aa15.83■□□□□ 0.12
VIM-206ENST00000487938 ADPRHL1Q8NDY3 354 aa15.83■□□□□ 0.12
VIM-206ENST00000487938 ROBO4Q8WZ75 1007 aa15.83■□□□□ 0.12
VIM-206ENST00000487938 CCDC74BQ96LY2 380 aa15.83■□□□□ 0.12
VIM-206ENST00000487938 ST6GALNAC5Q9BVH7 336 aa15.83■□□□□ 0.12
VIM-206ENST00000487938 ZNF416Q9BWM5 594 aa15.83■□□□□ 0.12
VIM-206ENST00000487938 CHMP1AQ9HD42 196 aaPredicted RBP15.83■□□□□ 0.12
VIM-206ENST00000487938 CSAG2Q9Y5P2 127 aa15.83■□□□□ 0.12
VIM-206ENST00000487938 B3GALT1Q9Y5Z6 326 aa15.83■□□□□ 0.12
VIM-206ENST00000487938 PGAM2P15259 253 aa15.82■□□□□ 0.12
VIM-206ENST00000487938 CNR1P21554 472 aa15.82■□□□□ 0.12
VIM-206ENST00000487938 PSMB6P28072 239 aa15.82■□□□□ 0.12
VIM-206ENST00000487938 ARFRP1Q13795 201 aa15.82■□□□□ 0.12
VIM-206ENST00000487938 HIST3H3Q16695 136 aa15.82■□□□□ 0.12
VIM-206ENST00000487938 TMEM185AQ8NFB2 350 aa15.82■□□□□ 0.12
VIM-206ENST00000487938 ELP5Q8TE02 316 aa15.82■□□□□ 0.12
VIM-206ENST00000487938 MAFIPQ8WZ33 124 aa15.82■□□□□ 0.12
VIM-206ENST00000487938 HLA-CQ95604 372 aa15.82■□□□□ 0.12
VIM-206ENST00000487938 NUDT16L1Q9BRJ7 211 aaKnown RBP15.82■□□□□ 0.12
VIM-206ENST00000487938 C5orf66Q9H5L9 145 aa15.82■□□□□ 0.12
VIM-206ENST00000487938 OCIAD1Q9NX40 245 aa15.82■□□□□ 0.12
VIM-206ENST00000487938 IGHV3-15A0A0B4J1V0 119 aa15.82■□□□□ 0.12
VIM-206ENST00000487938 DBX1A6NMT0 343 aa15.82■□□□□ 0.12
VIM-206ENST00000487938 F5H5K5 113 aa15.82■□□□□ 0.12
VIM-206ENST00000487938 GSTP1P09211 210 aaKnown RBP15.82■□□□□ 0.12
VIM-206ENST00000487938 TBPP20226 339 aa15.82■□□□□ 0.12
VIM-206ENST00000487938 SNTB1Q13884 538 aaKnown RBP15.82■□□□□ 0.12
VIM-206ENST00000487938 ZNF273Q14593 569 aa15.82■□□□□ 0.12
VIM-206ENST00000487938 BPIFCQ8NFQ6 507 aa15.82■□□□□ 0.12
VIM-206ENST00000487938 OR51T1Q8NGJ9 327 aa15.82■□□□□ 0.12
VIM-206ENST00000487938 OR14K1Q8NGZ2 314 aa15.82■□□□□ 0.12
VIM-206ENST00000487938 DCUN1D4Q92564 292 aa15.82■□□□□ 0.12
VIM-206ENST00000487938 LY6G6EA0A0G2JKS1 128 aa15.81■□□□□ 0.12
VIM-206ENST00000487938 A0A1B0GW55 424 aa15.81■□□□□ 0.12
VIM-206ENST00000487938 AQP7P3A6NL99 342 aa15.81■□□□□ 0.12
VIM-206ENST00000487938 SDCBPO00560 298 aaPredicted RBP15.81■□□□□ 0.12
VIM-206ENST00000487938 SIGLEC6O43699 453 aa15.81■□□□□ 0.12
VIM-206ENST00000487938 CRHP06850 196 aa15.81■□□□□ 0.12
VIM-206ENST00000487938 DUX4L2P0CJ85 424 aa15.81■□□□□ 0.12
VIM-206ENST00000487938 DUX4L3P0CJ86 424 aa15.81■□□□□ 0.12
VIM-206ENST00000487938 DUX4L4P0CJ87 422 aa15.81■□□□□ 0.12
VIM-206ENST00000487938 DUX4L5P0CJ88 424 aa15.81■□□□□ 0.12
VIM-206ENST00000487938 DUX4L6P0CJ89 424 aa15.81■□□□□ 0.12
VIM-206ENST00000487938 DUX4L7P0CJ90 424 aa15.81■□□□□ 0.12
VIM-206ENST00000487938 DHPSP49366 369 aaPredicted RBP15.81■□□□□ 0.12
VIM-206ENST00000487938 DEFA5Q01523 94 aa15.81■□□□□ 0.12
VIM-206ENST00000487938 PAN3Q58A45 887 aaKnown RBP15.81■□□□□ 0.12
VIM-206ENST00000487938 PHYHD1Q5SRE7 291 aa15.81■□□□□ 0.12
VIM-206ENST00000487938 DOK3Q7L591 496 aa15.81■□□□□ 0.12
VIM-206ENST00000487938 PPP1R3BQ86XI6 285 aa15.81■□□□□ 0.12
VIM-206ENST00000487938 FAM219AQ8IW50 185 aa15.81■□□□□ 0.12
VIM-206ENST00000487938 TMEM230Q96A57 120 aa15.81■□□□□ 0.12
VIM-206ENST00000487938 PGAM5Q96HS1 289 aa15.81■□□□□ 0.12
VIM-206ENST00000487938 LYZL4Q96KX0 146 aa15.81■□□□□ 0.12
VIM-206ENST00000487938 ARPC5LQ9BPX5 153 aa15.81■□□□□ 0.12
VIM-206ENST00000487938 PRO3102Q9H379 93 aa15.81■□□□□ 0.12
VIM-206ENST00000487938 LDAHQ9H6V9 325 aa15.81■□□□□ 0.12
VIM-206ENST00000487938 DUX4Q9UBX2 424 aa15.81■□□□□ 0.12
VIM-206ENST00000487938 GLS2Q9UI32 602 aa15.81■□□□□ 0.12
VIM-206ENST00000487938 GPR132Q9UNW8 380 aa15.81■□□□□ 0.12
VIM-206ENST00000487938 U3KQA8 63 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms