RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 A0A0U1RQV5 110 aa16.6■□□□□ 0.25
SEC22A-208ENST00000487572 ANKRD30BLA7E2S9 258 aa16.6■□□□□ 0.25
SEC22A-208ENST00000487572 TTRP02766 147 aa16.6■□□□□ 0.25
SEC22A-208ENST00000487572 DDOSTP39656 456 aa16.6■□□□□ 0.25
SEC22A-208ENST00000487572 HNRNPA0Q13151 305 aaKnown RBP16.6■□□□□ 0.25
SEC22A-208ENST00000487572 KCTD20Q7Z5Y7 419 aa16.6■□□□□ 0.25
SEC22A-208ENST00000487572 CATSPERDQ86XM0 798 aa16.6■□□□□ 0.25
SEC22A-208ENST00000487572 ELMOD2Q8IZ81 293 aa16.6■□□□□ 0.25
SEC22A-208ENST00000487572 CIARTQ8N365 385 aaPredicted RBP16.6■□□□□ 0.25
SEC22A-208ENST00000487572 GGHQ92820 318 aa16.6■□□□□ 0.25
SEC22A-208ENST00000487572 ISG20L2Q9H9L3 353 aaKnown RBP16.6■□□□□ 0.25
SEC22A-208ENST00000487572 MRPL15Q9P015 296 aaKnown RBP16.6■□□□□ 0.25
SEC22A-208ENST00000487572 ZNF391Q9UJN7 358 aa16.6■□□□□ 0.25
SEC22A-208ENST00000487572 MAP1AP78559 2803 aaPredicted RBP16.6■□□□□ 0.25
SEC22A-208ENST00000487572 ITPR3Q14573 2671 aa16.59■□□□□ 0.25
SEC22A-208ENST00000487572 P2RY10O00398 339 aa16.59■□□□□ 0.25
SEC22A-208ENST00000487572 CD99P14209 185 aa16.59■□□□□ 0.25
SEC22A-208ENST00000487572 ACHEP22303 614 aa16.59■□□□□ 0.25
SEC22A-208ENST00000487572 MYF6P23409 242 aa16.59■□□□□ 0.25
SEC22A-208ENST00000487572 ACKR3P25106 362 aa16.59■□□□□ 0.25
SEC22A-208ENST00000487572 DCKP27707 260 aa16.59■□□□□ 0.25
SEC22A-208ENST00000487572 CRYBB2P43320 205 aa16.59■□□□□ 0.25
SEC22A-208ENST00000487572 OR8B8Q15620 311 aa16.59■□□□□ 0.25
SEC22A-208ENST00000487572 AHSA2Q719I0 299 aa16.59■□□□□ 0.25
SEC22A-208ENST00000487572 PRSS35Q8N3Z0 413 aa16.59■□□□□ 0.25
SEC22A-208ENST00000487572 MAPK1IP1LQ8NDC0 245 aa16.59■□□□□ 0.25
SEC22A-208ENST00000487572 TMEM80Q96HE8 168 aa16.59■□□□□ 0.25
SEC22A-208ENST00000487572 MYCBPQ99417 103 aaPredicted RBP16.59■□□□□ 0.25
SEC22A-208ENST00000487572 PAPOLGQ9BWT3 736 aaKnown RBP16.59■□□□□ 0.25
SEC22A-208ENST00000487572 REG4Q9BYZ8 158 aa16.59■□□□□ 0.25
SEC22A-208ENST00000487572 ANKRD60Q9BZ19 345 aa16.59■□□□□ 0.25
SEC22A-208ENST00000487572 CHODLQ9H9P2 273 aa16.59■□□□□ 0.25
SEC22A-208ENST00000487572 ZNF275Q9NSD4 429 aaPredicted RBP16.59■□□□□ 0.25
SEC22A-208ENST00000487572 IL19Q9UHD0 177 aa16.59■□□□□ 0.25
SEC22A-208ENST00000487572 RHBDD3Q9Y3P4 386 aa16.59■□□□□ 0.25
SEC22A-208ENST00000487572 EFCAB10A6NFE3 127 aa16.58■□□□□ 0.24
SEC22A-208ENST00000487572 H3BSH0 61 aa16.58■□□□□ 0.24
SEC22A-208ENST00000487572 NDUFS8O00217 210 aa16.58■□□□□ 0.24
SEC22A-208ENST00000487572 LIMS3P0CW19 117 aa16.58■□□□□ 0.24
SEC22A-208ENST00000487572 LIMS4P0CW20 117 aa16.58■□□□□ 0.24
SEC22A-208ENST00000487572 SLC25A16P16260 332 aa16.58■□□□□ 0.24
SEC22A-208ENST00000487572 MYL12AP19105 171 aa16.58■□□□□ 0.24
SEC22A-208ENST00000487572 TNFRSF1AP19438 455 aa16.58■□□□□ 0.24
SEC22A-208ENST00000487572 RBMXP38159 391 aaKnown RBP16.58■□□□□ 0.24
SEC22A-208ENST00000487572 GNALP38405 381 aa16.58■□□□□ 0.24
SEC22A-208ENST00000487572 SRP9P49458 86 aaKnown RBP16.58■□□□□ 0.24
SEC22A-208ENST00000487572 ETV1P50549 477 aa16.58■□□□□ 0.24
SEC22A-208ENST00000487572 MRPS11P82912 194 aaKnown RBP16.58■□□□□ 0.24
SEC22A-208ENST00000487572 ST3GAL4Q11206 333 aa16.58■□□□□ 0.24
SEC22A-208ENST00000487572 HFEQ30201 348 aa16.58■□□□□ 0.24
SEC22A-208ENST00000487572 WDR38Q5JTN6 314 aa16.58■□□□□ 0.24
SEC22A-208ENST00000487572 CSNK2A3Q8NEV1 391 aa16.58■□□□□ 0.24
SEC22A-208ENST00000487572 CCL17Q92583 94 aa16.58■□□□□ 0.24
SEC22A-208ENST00000487572 PELI1Q96FA3 418 aa16.58■□□□□ 0.24
SEC22A-208ENST00000487572 MEGF10Q96KG7 1140 aa16.58■□□□□ 0.24
SEC22A-208ENST00000487572 CNBD2Q96M20 576 aa16.58■□□□□ 0.24
SEC22A-208ENST00000487572 ZNF649Q9BS31 505 aa16.58■□□□□ 0.24
SEC22A-208ENST00000487572 TMUB1Q9BVT8 246 aa16.58■□□□□ 0.24
SEC22A-208ENST00000487572 BPESC1Q9GZL8 116 aa16.58■□□□□ 0.24
SEC22A-208ENST00000487572 SLC22A4Q9H015 551 aa16.58■□□□□ 0.24
SEC22A-208ENST00000487572 DLL4Q9NR61 685 aa16.58■□□□□ 0.24
SEC22A-208ENST00000487572 PSORS1C1Q9UIG5 152 aa16.58■□□□□ 0.24
SEC22A-208ENST00000487572 DIMT1Q9UNQ2 313 aaKnown RBP16.58■□□□□ 0.24
SEC22A-208ENST00000487572 NOP16Q9Y3C1 178 aaKnown RBP16.58■□□□□ 0.24
SEC22A-208ENST00000487572 VPS13CQ709C8 3753 aa16.57■□□□□ 0.24
SEC22A-208ENST00000487572 A0A1B0GWJ7 208 aa16.57■□□□□ 0.24
SEC22A-208ENST00000487572 PPIHO43447 177 aaKnown RBP16.57■□□□□ 0.24
SEC22A-208ENST00000487572 RP2O75695 350 aa16.57■□□□□ 0.24
SEC22A-208ENST00000487572 HTR1AP08908 422 aa16.57■□□□□ 0.24
SEC22A-208ENST00000487572 GIFP27352 417 aa16.57■□□□□ 0.24
SEC22A-208ENST00000487572 NR4A2P43354 598 aa16.57■□□□□ 0.24
SEC22A-208ENST00000487572 KIR3DL2P43630 455 aa16.57■□□□□ 0.24
SEC22A-208ENST00000487572 MAP2K3P46734 347 aa16.57■□□□□ 0.24
SEC22A-208ENST00000487572 MVKQ03426 396 aa16.57■□□□□ 0.24
SEC22A-208ENST00000487572 C6orf141Q5SZD1 244 aa16.57■□□□□ 0.24
SEC22A-208ENST00000487572 SYS1Q8N2H4 156 aa16.57■□□□□ 0.24
SEC22A-208ENST00000487572 FTMTQ8N4E7 242 aa16.57■□□□□ 0.24
SEC22A-208ENST00000487572 OR8S1Q8NH09 359 aa16.57■□□□□ 0.24
SEC22A-208ENST00000487572 RNF166Q96A37 237 aaPredicted RBP16.57■□□□□ 0.24
SEC22A-208ENST00000487572 JAM3Q9BX67 310 aa16.57■□□□□ 0.24
SEC22A-208ENST00000487572 PPP1R3EQ9H7J1 279 aa16.57■□□□□ 0.24
SEC22A-208ENST00000487572 PLCXD1Q9NUJ7 323 aa16.57■□□□□ 0.24
SEC22A-208ENST00000487572 EXOSC1Q9Y3B2 195 aaKnown RBP16.57■□□□□ 0.24
SEC22A-208ENST00000487572 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.56■□□□□ 0.24
SEC22A-208ENST00000487572 ZNF850A8MQ14 1090 aa16.56■□□□□ 0.24
SEC22A-208ENST00000487572 VWC2LB2RUY7 222 aa16.56■□□□□ 0.24
SEC22A-208ENST00000487572 GMDSO60547 372 aa16.56■□□□□ 0.24
SEC22A-208ENST00000487572 IGLV3-1P01715 115 aa16.56■□□□□ 0.24
SEC22A-208ENST00000487572 PIPP12273 146 aaPredicted RBP16.56■□□□□ 0.24
SEC22A-208ENST00000487572 GPR6P46095 362 aaPredicted RBP16.56■□□□□ 0.24
SEC22A-208ENST00000487572 NANOS3P60323 173 aaKnown RBP16.56■□□□□ 0.24
SEC22A-208ENST00000487572 RIN1Q13671 783 aa16.56■□□□□ 0.24
SEC22A-208ENST00000487572 SNCBQ16143 134 aa16.56■□□□□ 0.24
SEC22A-208ENST00000487572 STX19Q8N4C7 294 aa16.56■□□□□ 0.24
SEC22A-208ENST00000487572 ZNF540Q8NDQ6 660 aa16.56■□□□□ 0.24
SEC22A-208ENST00000487572 SEMA6DQ8NFY4 1073 aa16.56■□□□□ 0.24
SEC22A-208ENST00000487572 OR2G2Q8NGZ5 317 aa16.56■□□□□ 0.24
SEC22A-208ENST00000487572 PIGCQ92535 297 aa16.56■□□□□ 0.24
SEC22A-208ENST00000487572 ZNF184Q99676 751 aaPredicted RBP16.56■□□□□ 0.24
SEC22A-208ENST00000487572 CHCHD3Q9NX63 227 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms