RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 GUCA2AQ02747 115 aa15.95■□□□□ 0.14
SMPDL3A-202ENST00000487215 MZT1Q08AG7 82 aa15.95■□□□□ 0.14
SMPDL3A-202ENST00000487215 WDR38Q5JTN6 314 aa15.95■□□□□ 0.14
SMPDL3A-202ENST00000487215 SAMD5Q5TGI4 173 aa15.95■□□□□ 0.14
SMPDL3A-202ENST00000487215 SLC35E4Q6ICL7 350 aa15.95■□□□□ 0.14
SMPDL3A-202ENST00000487215 C8orf82Q6P1X6 216 aaPredicted RBP15.95■□□□□ 0.14
SMPDL3A-202ENST00000487215 DRAM2Q6UX65 266 aa15.95■□□□□ 0.14
SMPDL3A-202ENST00000487215 Q6ZPA2 131 aa15.95■□□□□ 0.14
SMPDL3A-202ENST00000487215 WDR86Q86TI4 376 aa15.95■□□□□ 0.14
SMPDL3A-202ENST00000487215 C11orf53Q8IXP5 236 aa15.95■□□□□ 0.14
SMPDL3A-202ENST00000487215 GALNT4Q8N4A0 578 aa15.95■□□□□ 0.14
SMPDL3A-202ENST00000487215 FAM216BQ8N7L0 139 aa15.95■□□□□ 0.14
SMPDL3A-202ENST00000487215 LRRC29Q8WV35 223 aa15.95■□□□□ 0.14
SMPDL3A-202ENST00000487215 DHRS1Q96LJ7 313 aa15.95■□□□□ 0.14
SMPDL3A-202ENST00000487215 IFT27Q9BW83 186 aa15.95■□□□□ 0.14
SMPDL3A-202ENST00000487215 MED4Q9NPJ6 270 aa15.95■□□□□ 0.14
SMPDL3A-202ENST00000487215 DNAJB11Q9UBS4 358 aa15.95■□□□□ 0.14
SMPDL3A-202ENST00000487215 TET2Q6N021 2002 aaPredicted RBP15.94■□□□□ 0.14
SMPDL3A-202ENST00000487215 ANKRD61A6NGH8 418 aa15.94■□□□□ 0.14
SMPDL3A-202ENST00000487215 OPN1MWP04001 364 aa15.94■□□□□ 0.14
SMPDL3A-202ENST00000487215 OPN1MW2P0DN77 364 aa15.94■□□□□ 0.14
SMPDL3A-202ENST00000487215 OPN1MW3P0DN78 364 aa15.94■□□□□ 0.14
SMPDL3A-202ENST00000487215 MUC1P15941 1255 aaPredicted RBP15.94■□□□□ 0.14
SMPDL3A-202ENST00000487215 ZNF823P16415 610 aa15.94■□□□□ 0.14
SMPDL3A-202ENST00000487215 EEF1B2P24534 225 aaKnown RBP15.94■□□□□ 0.14
SMPDL3A-202ENST00000487215 NOS3P29474 1203 aa15.94■□□□□ 0.14
SMPDL3A-202ENST00000487215 KLRD1Q13241 179 aa15.94■□□□□ 0.14
SMPDL3A-202ENST00000487215 KRT72Q14CN4 511 aa15.94■□□□□ 0.14
SMPDL3A-202ENST00000487215 HERPUD1Q15011 391 aa15.94■□□□□ 0.14
SMPDL3A-202ENST00000487215 MICBQ29980 383 aa15.94■□□□□ 0.14
SMPDL3A-202ENST00000487215 CMTM4Q8IZR5 234 aa15.94■□□□□ 0.14
SMPDL3A-202ENST00000487215 Q8N7P7 452 aa15.94■□□□□ 0.14
SMPDL3A-202ENST00000487215 C7orf34Q96L11 122 aa15.94■□□□□ 0.14
SMPDL3A-202ENST00000487215 DMRTB1Q96MA1 342 aa15.94■□□□□ 0.14
SMPDL3A-202ENST00000487215 NSRP1Q9H0G5 558 aaKnown RBP15.94■□□□□ 0.14
SMPDL3A-202ENST00000487215 PPA2Q9H2U2 334 aa15.94■□□□□ 0.14
SMPDL3A-202ENST00000487215 RNPEPL1Q9HAU8 725 aa15.94■□□□□ 0.14
SMPDL3A-202ENST00000487215 FBLN5Q9UBX5 448 aa15.94■□□□□ 0.14
SMPDL3A-202ENST00000487215 SAMD4AQ9UPU9 718 aaKnown RBP15.94■□□□□ 0.14
SMPDL3A-202ENST00000487215 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.93■□□□□ 0.14
SMPDL3A-202ENST00000487215 PIN1P1O15428 100 aa15.93■□□□□ 0.14
SMPDL3A-202ENST00000487215 SLC2A1P11166 492 aa15.93■□□□□ 0.14
SMPDL3A-202ENST00000487215 PSKH1P11801 424 aa15.93■□□□□ 0.14
SMPDL3A-202ENST00000487215 GABRA5P31644 462 aa15.93■□□□□ 0.14
SMPDL3A-202ENST00000487215 SMIM11AP58511 58 aa15.93■□□□□ 0.14
SMPDL3A-202ENST00000487215 Q6ZTK2 550 aa15.93■□□□□ 0.14
SMPDL3A-202ENST00000487215 SLC36A1Q7Z2H8 476 aa15.93■□□□□ 0.14
SMPDL3A-202ENST00000487215 PNKDQ8N490 385 aa15.93■□□□□ 0.14
SMPDL3A-202ENST00000487215 OR8S1Q8NH09 359 aa15.93■□□□□ 0.14
SMPDL3A-202ENST00000487215 OR5R1Q8NH85 324 aa15.93■□□□□ 0.14
SMPDL3A-202ENST00000487215 TNFRSF14Q92956 283 aa15.93■□□□□ 0.14
SMPDL3A-202ENST00000487215 SEH1LQ96EE3 360 aa15.93■□□□□ 0.14
SMPDL3A-202ENST00000487215 SPAG4Q9NPE6 437 aa15.93■□□□□ 0.14
SMPDL3A-202ENST00000487215 ABCD2Q9UBJ2 740 aa15.93■□□□□ 0.14
SMPDL3A-202ENST00000487215 PRPF19Q9UMS4 504 aaKnown RBP15.93■□□□□ 0.14
SMPDL3A-202ENST00000487215 SIGLEC9Q9Y336 463 aa15.93■□□□□ 0.14
SMPDL3A-202ENST00000487215 TVP23AA6NH52 213 aa15.92■□□□□ 0.14
SMPDL3A-202ENST00000487215 ACOT8O14734 319 aa15.92■□□□□ 0.14
SMPDL3A-202ENST00000487215 PAHP00439 452 aa15.92■□□□□ 0.14
SMPDL3A-202ENST00000487215 PYCR1P32322 319 aa15.92■□□□□ 0.14
SMPDL3A-202ENST00000487215 GRK5P34947 590 aa15.92■□□□□ 0.14
SMPDL3A-202ENST00000487215 SAA4P35542 130 aa15.92■□□□□ 0.14
SMPDL3A-202ENST00000487215 PRKXP51817 358 aa15.92■□□□□ 0.14
SMPDL3A-202ENST00000487215 PSME3P61289 254 aa15.92■□□□□ 0.14
SMPDL3A-202ENST00000487215 CSNK2BP67870 215 aa15.92■□□□□ 0.14
SMPDL3A-202ENST00000487215 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.92■□□□□ 0.14
SMPDL3A-202ENST00000487215 FAM189A2Q15884 450 aa15.92■□□□□ 0.14
SMPDL3A-202ENST00000487215 GLYATQ6IB77 296 aa15.92■□□□□ 0.14
SMPDL3A-202ENST00000487215 LYPD4Q6UWN0 246 aa15.92■□□□□ 0.14
SMPDL3A-202ENST00000487215 FAM86B1Q8N7N1 296 aa15.92■□□□□ 0.14
SMPDL3A-202ENST00000487215 COPS4Q9BT78 406 aa15.92■□□□□ 0.14
SMPDL3A-202ENST00000487215 DCTN5Q9BTE1 182 aa15.92■□□□□ 0.14
SMPDL3A-202ENST00000487215 OPA3Q9H6K4 179 aa15.92■□□□□ 0.14
SMPDL3A-202ENST00000487215 N6AMT1Q9Y5N5 214 aa15.92■□□□□ 0.14
SMPDL3A-202ENST00000487215 MEIOCA2RUB1 952 aa15.91■□□□□ 0.14
SMPDL3A-202ENST00000487215 ANKRD30BLA7E2S9 258 aa15.91■□□□□ 0.14
SMPDL3A-202ENST00000487215 GPR37O15354 613 aa15.91■□□□□ 0.14
SMPDL3A-202ENST00000487215 NDUFB3O43676 98 aa15.91■□□□□ 0.14
SMPDL3A-202ENST00000487215 AMY2BP19961 511 aa15.91■□□□□ 0.14
SMPDL3A-202ENST00000487215 PRDX6P30041 224 aa15.91■□□□□ 0.14
SMPDL3A-202ENST00000487215 IKZF1Q13422 519 aa15.91■□□□□ 0.14
SMPDL3A-202ENST00000487215 SLC35F1Q5T1Q4 408 aa15.91■□□□□ 0.14
SMPDL3A-202ENST00000487215 WDR82Q6UXN9 313 aa15.91■□□□□ 0.14
SMPDL3A-202ENST00000487215 DPY19L4Q7Z388 723 aa15.91■□□□□ 0.14
SMPDL3A-202ENST00000487215 DCXRQ7Z4W1 244 aa15.91■□□□□ 0.14
SMPDL3A-202ENST00000487215 ZDHHC21Q8IVQ6 265 aa15.91■□□□□ 0.14
SMPDL3A-202ENST00000487215 C11orf44Q8N8P7 122 aa15.91■□□□□ 0.14
SMPDL3A-202ENST00000487215 OR1M1Q8NGA1 313 aa15.91■□□□□ 0.14
SMPDL3A-202ENST00000487215 ZNRF4Q8WWF5 429 aa15.91■□□□□ 0.14
SMPDL3A-202ENST00000487215 SPSB4Q96A44 273 aa15.91■□□□□ 0.14
SMPDL3A-202ENST00000487215 DCAF13Q9NV06 445 aaKnown RBP15.91■□□□□ 0.14
SMPDL3A-202ENST00000487215 ZNF446Q9NWS9 450 aa15.91■□□□□ 0.14
SMPDL3A-202ENST00000487215 XRCC2O43543 280 aa15.9■□□□□ 0.14
SMPDL3A-202ENST00000487215 IDH3BO43837 385 aa15.9■□□□□ 0.14
SMPDL3A-202ENST00000487215 SELLP14151 372 aa15.9■□□□□ 0.14
SMPDL3A-202ENST00000487215 DDOSTP39656 456 aa15.9■□□□□ 0.14
SMPDL3A-202ENST00000487215 TGM4P49221 684 aa15.9■□□□□ 0.14
SMPDL3A-202ENST00000487215 EFNB2P52799 333 aa15.9■□□□□ 0.14
SMPDL3A-202ENST00000487215 STUMQ69YW2 141 aa15.9■□□□□ 0.14
SMPDL3A-202ENST00000487215 C1orf122Q6ZSJ8 110 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms