RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 FBXO4Q9UKT5 387 aa14.81□□□□□ -0.04
COL7A1-210ENST00000487017 HNF1AP20823 631 aa14.81□□□□□ -0.04
COL7A1-210ENST00000487017 HTRA4P83105 476 aaPredicted RBP14.81□□□□□ -0.04
COL7A1-210ENST00000487017 PLAC9Q5JTB6 97 aa14.81□□□□□ -0.04
COL7A1-210ENST00000487017 C8orf82Q6P1X6 216 aaPredicted RBP14.81□□□□□ -0.04
COL7A1-210ENST00000487017 TTC9Q92623 222 aa14.81□□□□□ -0.04
COL7A1-210ENST00000487017 DHHO43323 396 aa14.81□□□□□ -0.04
COL7A1-210ENST00000487017 TGOLN2O43493 480 aa14.81□□□□□ -0.04
COL7A1-210ENST00000487017 TMEM88Q6PEY1 159 aa14.81□□□□□ -0.04
COL7A1-210ENST00000487017 TP53I13Q8NBR0 393 aaPredicted RBP14.81□□□□□ -0.04
COL7A1-210ENST00000487017 IGHV3-15A0A0B4J1V0 119 aa14.81□□□□□ -0.04
COL7A1-210ENST00000487017 OR2W5A6NFC9 320 aa14.81□□□□□ -0.04
COL7A1-210ENST00000487017 LRRC30A6NM36 301 aa14.81□□□□□ -0.04
COL7A1-210ENST00000487017 AQP8O94778 261 aa14.81□□□□□ -0.04
COL7A1-210ENST00000487017 ACSM4P0C7M7 580 aa14.81□□□□□ -0.04
COL7A1-210ENST00000487017 THBS4P35443 961 aa14.81□□□□□ -0.04
COL7A1-210ENST00000487017 YBX1P67809 324 aaKnown RBP14.81□□□□□ -0.04
COL7A1-210ENST00000487017 SHHQ15465 462 aa14.81□□□□□ -0.04
COL7A1-210ENST00000487017 RNF151Q2KHN1 245 aa14.81□□□□□ -0.04
COL7A1-210ENST00000487017 C11orf40Q8WZ69 217 aa14.81□□□□□ -0.04
COL7A1-210ENST00000487017 ST3GAL6Q9Y274 331 aa14.81□□□□□ -0.04
COL7A1-210ENST00000487017 ARID1BQ8NFD5 2236 aaPredicted RBP14.81□□□□□ -0.04
COL7A1-210ENST00000487017 STRCQ7RTU9 1775 aa14.81□□□□□ -0.04
COL7A1-210ENST00000487017 SLC31A2O15432 143 aa14.81□□□□□ -0.04
COL7A1-210ENST00000487017 YIF1AO95070 293 aa14.81□□□□□ -0.04
COL7A1-210ENST00000487017 DTYMKP23919 212 aa14.81□□□□□ -0.04
COL7A1-210ENST00000487017 F2RP25116 425 aa14.81□□□□□ -0.04
COL7A1-210ENST00000487017 OR2B8PP59922 312 aa14.81□□□□□ -0.04
COL7A1-210ENST00000487017 PHYHD1Q5SRE7 291 aa14.81□□□□□ -0.04
COL7A1-210ENST00000487017 UQCC3Q6UW78 93 aa14.81□□□□□ -0.04
COL7A1-210ENST00000487017 OR4F5Q8NH21 305 aa14.81□□□□□ -0.04
COL7A1-210ENST00000487017 OR4F4Q96R69 305 aa14.81□□□□□ -0.04
COL7A1-210ENST00000487017 RIMS4Q9H426 269 aaPredicted RBP14.81□□□□□ -0.04
COL7A1-210ENST00000487017 CXCL13O43927 109 aa14.8□□□□□ -0.04
COL7A1-210ENST00000487017 GLB1P16278 677 aa14.8□□□□□ -0.04
COL7A1-210ENST00000487017 MLF1P58340 268 aa14.8□□□□□ -0.04
COL7A1-210ENST00000487017 ZNF787Q6DD87 383 aa14.8□□□□□ -0.04
COL7A1-210ENST00000487017 OSR2Q8N2R0 312 aa14.8□□□□□ -0.04
COL7A1-210ENST00000487017 FAM173AQ9BQD7 235 aa14.8□□□□□ -0.04
COL7A1-210ENST00000487017 DNAJB12Q9NXW2 375 aaKnown RBP14.8□□□□□ -0.04
COL7A1-210ENST00000487017 TNFSF11O14788 317 aa14.8□□□□□ -0.04
COL7A1-210ENST00000487017 S100A8P05109 93 aa14.8□□□□□ -0.04
COL7A1-210ENST00000487017 WDR38Q5JTN6 314 aa14.8□□□□□ -0.04
COL7A1-210ENST00000487017 CLRN3Q8NCR9 226 aa14.8□□□□□ -0.04
COL7A1-210ENST00000487017 TVP23CQ96ET8 276 aa14.8□□□□□ -0.04
COL7A1-210ENST00000487017 ACTR3CQ9C0K3 210 aaPredicted RBP14.8□□□□□ -0.04
COL7A1-210ENST00000487017 UFSP2Q9NUQ7 469 aa14.8□□□□□ -0.04
COL7A1-210ENST00000487017 LILRA5A6NI73 299 aa14.8□□□□□ -0.04
COL7A1-210ENST00000487017 ZDHHC23Q8IYP9 409 aa14.8□□□□□ -0.04
COL7A1-210ENST00000487017 ZDHHC22Q8N966 263 aa14.8□□□□□ -0.04
COL7A1-210ENST00000487017 OR10P1Q8NGE3 313 aa14.8□□□□□ -0.04
COL7A1-210ENST00000487017 DLEC1Q9Y238 1755 aa14.8□□□□□ -0.04
COL7A1-210ENST00000487017 AVPR2P30518 371 aa14.8□□□□□ -0.04
COL7A1-210ENST00000487017 OR2B11Q5JQS5 317 aa14.8□□□□□ -0.04
COL7A1-210ENST00000487017 THNSL2Q86YJ6 484 aa14.8□□□□□ -0.04
COL7A1-210ENST00000487017 LINC01555Q8NAE3 123 aa14.8□□□□□ -0.04
COL7A1-210ENST00000487017 BPIFCQ8NFQ6 507 aa14.8□□□□□ -0.04
COL7A1-210ENST00000487017 LHX4Q969G2 390 aa14.8□□□□□ -0.04
COL7A1-210ENST00000487017 MRGPRX3Q96LB0 322 aa14.8□□□□□ -0.04
COL7A1-210ENST00000487017 RHOFQ9HBH0 211 aa14.8□□□□□ -0.04
COL7A1-210ENST00000487017 DOCK1Q14185 1865 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 SPTY2D1-AS1A0A0U1RR47 76 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 PAX6P26367 422 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 GSG1Q2KHT4 349 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 SLC38A6Q8IZM9 456 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 MARVELD1Q9BSK0 173 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 DLL4Q9NR61 685 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 ADAMTS7Q9UKP4 1686 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 PDGFBP01127 241 aaPredicted RBP14.79□□□□□ -0.04
COL7A1-210ENST00000487017 PTHLHP12272 177 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 LSRQ86X29 649 aaPredicted RBP14.79□□□□□ -0.04
COL7A1-210ENST00000487017 ZNF561Q8N587 486 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 RXFP4Q8TDU9 374 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 MTFP1Q9UDX5 166 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 ABCA3Q99758 1704 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 LAMB2P55268 1798 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 ZFPL1O95159 310 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 IAPPP10997 89 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 DBX2Q6ZNG2 339 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 SLC25A26Q70HW3 274 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 PRSS42Q7Z5A4 293 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 ZNF331Q9NQX6 463 aaPredicted RBP14.79□□□□□ -0.04
COL7A1-210ENST00000487017 RCL1Q9Y2P8 373 aaKnown RBP14.79□□□□□ -0.04
COL7A1-210ENST00000487017 SDK1Q7Z5N4 2213 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 A0A096LPE4 126 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 TMEM272A0A1B0GTI8 110 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 A0A1W2PPZ6 126 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 K7EQM0 130 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 ARPC3O15145 178 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 CDAP32320 146 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 OR1N1Q8NGS0 311 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 FGF14Q92915 247 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 SEC14L6B5MCN3 397 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 MBP02144 154 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 FAHP16930 419 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 FPR2P25090 351 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 HAAOP46952 286 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 PSENENQ9NZ42 101 aa14.79□□□□□ -0.04
COL7A1-210ENST00000487017 CLN3Q13286 438 aa14.78□□□□□ -0.04
COL7A1-210ENST00000487017 CISD2Q8N5K1 135 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms