RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 H3BMH7 237 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 ZNF354AO60765 605 aaPredicted RBP10.81□□□□□ -0.68
COL3A1-206ENST00000487010 LRP3O75074 770 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 EIF5AP63241 154 aaKnown RBP10.81□□□□□ -0.68
COL3A1-206ENST00000487010 TLE3Q04726 772 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 IL15RAQ13261 267 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 PEA15Q15121 130 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 ZFP82Q8N141 532 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 OR5H2Q8NGV7 314 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 OR13G1Q8NGZ3 307 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 OR51F2Q8NH61 342 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 SFT2D1Q8WV19 159 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.81□□□□□ -0.68
COL3A1-206ENST00000487010 BANF2Q9H503 90 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 CHST11Q9NPF2 352 aa10.81□□□□□ -0.68
COL3A1-206ENST00000487010 COLCA2A8K830 154 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 PRSS44E7EML9 344 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 TAAR5O14804 337 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 SFTA3P0C7M3 94 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 PET100P0DJ07 73 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 LPAR6P43657 344 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 OR3A4PP47883 348 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 EIF5AL1Q6IS14 154 aaKnown RBP10.8□□□□□ -0.68
COL3A1-206ENST00000487010 Q7L0L9 218 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 LHFPL1Q86WI0 220 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 CYYR1Q96J86 154 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 EMC6Q9BV81 110 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 TMEM59Q9BXS4 323 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 SEC61A2Q9H9S3 476 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 TAF9BQ9HBM6 251 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 KLHL13Q9P2N7 655 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 MMP17Q9ULZ9 603 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 CYP8B1Q9UNU6 501 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 ANKUB1A6NFN9 424 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 MFNGO00587 321 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 MED6O75586 246 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 CD5P06127 495 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 FCGR3AP08637 254 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 FOLR2P14207 255 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 AMY2BP19961 511 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 LAP3P28838 519 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 BIDP55957 195 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 AADACL3Q5VUY0 350 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 RPL7L1Q6DKI1 246 aaKnown RBP10.8□□□□□ -0.68
COL3A1-206ENST00000487010 BTNL8Q6UX41 500 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 PRSS58Q8IYP2 241 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 OR56B1Q8NGI3 324 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 ST8SIA1Q92185 356 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 MVB12AQ96EY5 273 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 ARHGAP5-AS1Q96IT6 56 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 C5orf34Q96MH7 638 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 NECAB3Q96P71 396 aaPredicted RBP10.8□□□□□ -0.68
COL3A1-206ENST00000487010 OSGIN2Q9Y236 505 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 PCDHGA1Q9Y5H4 931 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 RP1P56715 2156 aa10.8□□□□□ -0.68
COL3A1-206ENST00000487010 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.79□□□□□ -0.68
COL3A1-206ENST00000487010 A0A1W2PP11 408 aa10.79□□□□□ -0.68
COL3A1-206ENST00000487010 C2orf72A6NCS6 295 aa10.79□□□□□ -0.68
COL3A1-206ENST00000487010 HKR1P10072 659 aa10.79□□□□□ -0.68
COL3A1-206ENST00000487010 RPS2P15880 293 aaKnown RBP10.79□□□□□ -0.68
COL3A1-206ENST00000487010 NME2P22392 152 aa10.79□□□□□ -0.68
COL3A1-206ENST00000487010 GLRA1P23415 457 aa10.79□□□□□ -0.68
COL3A1-206ENST00000487010 APOBEC1P41238 236 aaKnown RBP10.79□□□□□ -0.68
COL3A1-206ENST00000487010 SULT1A2P50226 295 aa10.79□□□□□ -0.68
COL3A1-206ENST00000487010 P2RY4P51582 365 aa10.79□□□□□ -0.68
COL3A1-206ENST00000487010 HSD11B2P80365 405 aa10.79□□□□□ -0.68
COL3A1-206ENST00000487010 MISPQ8IVT2 679 aa10.79□□□□□ -0.68
COL3A1-206ENST00000487010 FAM219AQ8IW50 185 aa10.79□□□□□ -0.68
COL3A1-206ENST00000487010 RHBDD1Q8TEB9 315 aa10.79□□□□□ -0.68
COL3A1-206ENST00000487010 SOX7Q9BT81 388 aa10.79□□□□□ -0.68
COL3A1-206ENST00000487010 MOB1AQ9H8S9 216 aa10.79□□□□□ -0.68
COL3A1-206ENST00000487010 RNF122Q9H9V4 155 aa10.79□□□□□ -0.68
COL3A1-206ENST00000487010 GSKIPQ9P0R6 139 aa10.79□□□□□ -0.68
COL3A1-206ENST00000487010 ATXN7L1Q9ULK2 861 aaPredicted RBP10.79□□□□□ -0.68
COL3A1-206ENST00000487010 A0A1W2PPC4 97 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 FIGNL2A6NMB9 653 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 CRTAPO75718 401 aaPredicted RBP10.78□□□□□ -0.68
COL3A1-206ENST00000487010 RCC1P18754 421 aaPredicted RBP10.78□□□□□ -0.68
COL3A1-206ENST00000487010 FBLP22087 321 aaKnown RBP10.78□□□□□ -0.68
COL3A1-206ENST00000487010 OR3A2P47893 321 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 S100A10P60903 97 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 ARFRP1Q13795 201 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 FAM189A2Q15884 450 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 SWI5Q1ZZU3 235 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 NSUN5P2Q63ZY6 315 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 TMPRSS9Q7Z410 1059 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 ABHD12BQ7Z5M8 362 aaPredicted RBP10.78□□□□□ -0.68
COL3A1-206ENST00000487010 COMMD2Q86X83 199 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 LMX1AQ8TE12 382 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 DDIT4LQ96D03 193 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 OR5B2Q96R09 309 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 ST6GALNAC5Q9BVH7 336 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 MRPL13Q9BYD1 178 aaKnown RBP10.78□□□□□ -0.68
COL3A1-206ENST00000487010 SMCO4Q9NRQ5 59 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 PISDQ9UG56 409 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 MEMO1Q9Y316 297 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 LHFPL6Q9Y693 200 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 KNL1Q8NG31 2342 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 PMS2P1A4D2B8 440 aa10.78□□□□□ -0.68
COL3A1-206ENST00000487010 LIPT2A6NK58 231 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms