RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 COMTD1Q86VU5 262 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 RANBP3LQ86VV4 465 aaPredicted RBP3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 MSRB3Q8IXL7 192 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 C10orf53Q8N6V4 93 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 LRRC17Q8N6Y2 441 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 RBM15BQ8NDT2 890 aaKnown RBP3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 OR4K5Q8NGD3 323 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 OR9I1Q8NGQ6 314 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 SVIPQ8NHG7 77 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 NFKBIDQ8NI38 313 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 CCL17Q92583 94 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 POP5Q969H6 163 aaKnown RBP3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 LRRC58Q96CX6 371 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 TSPAN32Q96QS1 320 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 ZNF607Q96SK3 696 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 MCHR1Q99705 422 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 SH3GL3Q99963 347 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 PAIP2Q9BPZ3 127 aaKnown RBP3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 MRPL13Q9BYD1 178 aaKnown RBP3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 SLITRK2Q9H156 845 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 TMEM38AQ9H6F2 299 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 RNF121Q9H920 327 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 SIAEQ9HAT2 523 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 SLCO1B3Q9NPD5 702 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 NANSQ9NR45 359 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 PLEK2Q9NYT0 353 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 TAS2R5Q9NYW4 299 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 KLHL21Q9UJP4 597 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 LEF1Q9UJU2 399 aaPredicted RBP3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 SLC13A4Q9UKG4 626 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 NUP50Q9UKX7 468 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 LRCH1Q9Y2L9 728 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 PPIAL4AQ9Y536 164 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 VWFP04275 2813 aa3.3□□□□□ -1.88
SNRNP40-205ENST00000486941 EVPLLA8MZ36 301 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 H3BSA7 217 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 IFNL4K9M1U5 179 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 RNF13O43567 381 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 CHP2O43745 196 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 IGHV1-46P01743 117 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 IGHG1P01857 330 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 IGHMP01871 453 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 HIST1H2ABP04908 130 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 CD55P08174 381 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 VIMP08670 466 aaKnown RBP3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 MMP7P09237 267 aaPredicted RBP3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 ASAH2BP0C7U1 165 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 PGA4P0DJD7 388 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 PGA3P0DJD8 388 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 PPIAL4GP0DN37 164 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 CPT2P23786 658 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 STOMP27105 288 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 GCH1P30793 250 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 APLNRP35414 380 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 ERVS71-1P61550 626 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 LCN2P80188 198 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 MRPS34P82930 218 aaKnown RBP3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 DEFA6Q01524 100 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 HSF2Q03933 536 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 ZNF154Q13106 437 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 SCARB2Q14108 478 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 ZNF74Q16587 644 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 TMEM155Q4W5P6 130 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 PABPC1L2AQ5JQF8 200 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 C10orf128Q5T292 105 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 FAM27BQ5VT28 67 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 TTC33Q6PID6 262 aaPredicted RBP3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 EPGNQ6UW88 154 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 HIST3H2AQ7L7L0 130 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 HDDC2Q7Z4H3 204 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 ARMC8Q8IUR7 673 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 FUNDC1Q8IVP5 155 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 C1orf87Q8N0U7 546 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 C10orf111Q8N326 155 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 SIGLECL1Q8N7X8 197 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 DEFB108BQ8NET1 73 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 OR1J1Q8NGS3 322 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 KLF14Q8TD94 323 aaPredicted RBP3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 ST7LQ8TDW4 575 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 C22orf15Q8WYQ4 148 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 HIST1H2ACQ93077 130 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 MCHR2Q969V1 340 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 TRIM44Q96DX7 344 aaPredicted RBP3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 MPP4Q96JB8 637 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 POM121L2Q96KW2 1035 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 OR52B2Q96RD2 323 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 SEPHS2Q99611 448 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 ARHGDIGQ99819 225 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 GAL3ST1Q99999 423 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 WFDC6Q9BQY6 131 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 ZNF426Q9BUY5 554 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 KRTAP4-3Q9BYR4 195 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 SLC19A3Q9BZV2 496 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 OR51B6Q9H340 312 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 PATZ1Q9HBE1 687 aaKnown RBP3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 SLC25A37Q9NYZ2 338 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 VAPAQ9P0L0 249 aa3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 STX18Q9P2W9 335 aaKnown RBP3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 EIF3KQ9UBQ5 218 aaKnown RBP3.29□□□□□ -1.88
SNRNP40-205ENST00000486941 ZNF69Q9UC07 566 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms