RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 ZNF157P51786 506 aaPredicted RBP9.46□□□□□ -0.9
CCDC171-208ENST00000486641 SLC35A1P78382 337 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 BTG2P78543 158 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 UBE2V2Q15819 145 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 IAH1Q2TAA2 248 aaPredicted RBP9.46□□□□□ -0.9
CCDC171-208ENST00000486641 SOHLH1Q5JUK2 328 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 VAX1Q5SQQ9 334 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 DNLZQ5SXM8 178 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 AADACL3Q5VUY0 350 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 COX15Q7KZN9 410 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 ZNF101Q8IZC7 436 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 OR13G1Q8NGZ3 307 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 WFIKKN2Q8TEU8 576 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 CA5BP1Q8WTZ4 195 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 FGGYQ96C11 551 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 VSTM2LQ96N03 204 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 LRRC3BQ96PB8 259 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 PRRX2Q99811 253 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 SOX7Q9BT81 388 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 ARV1Q9H2C2 271 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 KIR3DX1Q9H7L2 352 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 BCO1Q9HAY6 547 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 WFDC1Q9HC57 220 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 G6PC2Q9NQR9 355 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 HS3ST3B1Q9Y662 390 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 URGCP-MRPS24S4R325 110 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 SPACA6W5XKT8 324 aa9.46□□□□□ -0.9
CCDC171-208ENST00000486641 TRBV23OR9-2A0A075B6M9 112 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 A0A0A6YYD4 124 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 TGIF2-C20orf24A0A0A6YYL0 155 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 OR5H15A6NDH6 313 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 OR5H1A6NKK0 313 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 GPR89AB7ZAQ6 455 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 P2RY10O00398 339 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 MPZL1O95297 269 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 APBB3O95704 486 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 TRGC2P03986 189 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 SEC11BP0C7V7 166 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 GPR89BP0CG08 455 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 ADH5P11766 374 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 PAX1P15863 534 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 FCARP24071 287 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 IGFALSP35858 605 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 ERVFRD-1P60508 538 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 CCINQ13939 588 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 LBHQ53QV2 105 aaPredicted RBP9.45□□□□□ -0.9
CCDC171-208ENST00000486641 CYB5R2Q6BCY4 276 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 LCN10Q6JVE6 187 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 CBLN3Q6UW01 205 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 Q7L0L9 218 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 RNF144BQ7Z419 303 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 CA13Q8N1Q1 262 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 OR10AD1Q8NGE0 317 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 FLVCR1-AS1Q8TAF5 88 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 KLHDC3Q9BQ90 382 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 PBDC1Q9BVG4 233 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 OR52A1Q9UKL2 312 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 WASF3Q9UPY6 502 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 LSM5Q9Y4Y9 91 aaKnown RBP9.45□□□□□ -0.9
CCDC171-208ENST00000486641 R4GMQ9 66 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 ARID1AO14497 2285 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 SDCBPO00560 298 aaPredicted RBP9.45□□□□□ -0.9
CCDC171-208ENST00000486641 XKRYO14609 159 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 BPNT1O95861 308 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 PRH1P02810 166 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 SLC35E2P0CK97 266 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 PPP1CCP36873 323 aaKnown RBP9.45□□□□□ -0.9
CCDC171-208ENST00000486641 EMP2P54851 167 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 CD81P60033 236 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 INSM1Q01101 510 aaPredicted RBP9.45□□□□□ -0.9
CCDC171-208ENST00000486641 BIKQ13323 160 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 CD226Q15762 336 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 PLAC9Q5JTB6 97 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 C1QL3Q5VWW1 255 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 BCORP1Q8N888 145 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 SUMF2Q8NBJ7 301 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 MFSD8Q8NHS3 518 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 G6PC3Q9BUM1 346 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 HDAC8Q9BY41 377 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 SH3BGRL3Q9H299 93 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.45□□□□□ -0.9
CCDC171-208ENST00000486641 TP53TG5Q9Y2B4 290 aa9.45□□□□□ -0.9
CCDC171-208ENST00000486641 ELOA3CA0A087WX78 387 aaPredicted RBP9.44□□□□□ -0.9
CCDC171-208ENST00000486641 H0YGG7 62 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 H3BQ15 152 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 SOCS1O15524 211 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 CYB5BO43169 146 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 RAD51DO75771 328 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 PTBP3O95758 552 aaKnown RBP9.44□□□□□ -0.9
CCDC171-208ENST00000486641 KNG1P01042 644 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 ISG15P05161 165 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 SNRPCP09234 159 aaKnown RBP9.44□□□□□ -0.9
CCDC171-208ENST00000486641 CT45A8P0DMV1 189 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 CT45A9P0DMV2 189 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 CSF2RAP15509 400 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 CTLA4P16410 223 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 SERPINA2P20848 420 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 TAGLN2P37802 199 aaKnown RBP9.44□□□□□ -0.9
CCDC171-208ENST00000486641 GNALP38405 381 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 ARF3P61204 181 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms