RNA–Protein interactions for RNA: ENST00000485967.1

SCAP-211, Transcript of SREBF chaperone, human

TSL 2

Gene SCAP, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAP-211	ENST00000485967	FOSL1	P15407	271 aa		11.78	□□□□□ -0.52
SCAP-211	ENST00000485967	MAGEB1	P43366	347 aa		11.78	□□□□□ -0.52
SCAP-211	ENST00000485967	GSK3A	P49840	483 aa		11.78	□□□□□ -0.52
SCAP-211	ENST00000485967	ETV1	P50549	477 aa		11.78	□□□□□ -0.52
SCAP-211	ENST00000485967	GBX2	P52951	348 aa	Predicted RBP	11.78	□□□□□ -0.52
SCAP-211	ENST00000485967	CCL8	P80075	99 aa		11.78	□□□□□ -0.52
SCAP-211	ENST00000485967	TNFAIP6	P98066	277 aa	Predicted RBP	11.78	□□□□□ -0.52
SCAP-211	ENST00000485967	FAM3A	P98173	230 aa		11.78	□□□□□ -0.52
SCAP-211	ENST00000485967	CARTPT	Q16568	116 aa		11.78	□□□□□ -0.52
SCAP-211	ENST00000485967	ODF4	Q2M2E3	257 aa		11.78	□□□□□ -0.52
SCAP-211	ENST00000485967		Q5PR19	223 aa		11.78	□□□□□ -0.52
SCAP-211	ENST00000485967	CATSPERD	Q86XM0	798 aa		11.78	□□□□□ -0.52
SCAP-211	ENST00000485967	ELMOD2	Q8IZ81	293 aa		11.78	□□□□□ -0.52
SCAP-211	ENST00000485967	KLHL36	Q8N4N3	616 aa		11.78	□□□□□ -0.52
SCAP-211	ENST00000485967	WFDC11	Q8NEX6	87 aa		11.78	□□□□□ -0.52
SCAP-211	ENST00000485967	OR56B2P	Q8NGI1	322 aa		11.78	□□□□□ -0.52
SCAP-211	ENST00000485967	OR51E1	Q8TCB6	317 aa		11.78	□□□□□ -0.52
SCAP-211	ENST00000485967	UBASH3B	Q8TF42	649 aa		11.78	□□□□□ -0.52
SCAP-211	ENST00000485967	ELMOD3	Q96FG2	381 aa		11.78	□□□□□ -0.52
SCAP-211	ENST00000485967	FAM71F1	Q96KD3	344 aa	Predicted RBP	11.78	□□□□□ -0.52
SCAP-211	ENST00000485967	RHNO1	Q9BSD3	238 aa		11.78	□□□□□ -0.52
SCAP-211	ENST00000485967	JAM3	Q9BX67	310 aa		11.78	□□□□□ -0.52
SCAP-211	ENST00000485967	SLC22A4	Q9H015	551 aa		11.78	□□□□□ -0.52
SCAP-211	ENST00000485967	ISG20L2	Q9H9L3	353 aa	Known RBP	11.78	□□□□□ -0.52
SCAP-211	ENST00000485967	G6PC2	Q9NQR9	355 aa		11.78	□□□□□ -0.52
SCAP-211	ENST00000485967	GPR84	Q9NQS5	396 aa		11.78	□□□□□ -0.52
SCAP-211	ENST00000485967	NKIRAS2	Q9NYR9	191 aa		11.78	□□□□□ -0.52
SCAP-211	ENST00000485967	SLC22A13	Q9Y226	551 aa		11.78	□□□□□ -0.52
SCAP-211	ENST00000485967	CAB39	Q9Y376	341 aa	Predicted RBP	11.78	□□□□□ -0.52
SCAP-211	ENST00000485967	NOP16	Q9Y3C1	178 aa	Known RBP	11.78	□□□□□ -0.52
SCAP-211	ENST00000485967	FBN3	Q75N90	2809 aa		11.77	□□□□□ -0.53
SCAP-211	ENST00000485967	hCG_38984	A0A1B0GV85	526 aa		11.77	□□□□□ -0.53
SCAP-211	ENST00000485967	P2RY10	O00398	339 aa		11.77	□□□□□ -0.53
SCAP-211	ENST00000485967	DENR	O43583	198 aa	Known RBP	11.77	□□□□□ -0.53
SCAP-211	ENST00000485967	TTR	P02766	147 aa		11.77	□□□□□ -0.53
SCAP-211	ENST00000485967	LIMS3	P0CW19	117 aa		11.77	□□□□□ -0.53
SCAP-211	ENST00000485967	LIMS4	P0CW20	117 aa		11.77	□□□□□ -0.53
SCAP-211	ENST00000485967	DAO	P14920	347 aa		11.77	□□□□□ -0.53
SCAP-211	ENST00000485967	CA6	P23280	308 aa		11.77	□□□□□ -0.53
SCAP-211	ENST00000485967	GNAL	P38405	381 aa		11.77	□□□□□ -0.53
SCAP-211	ENST00000485967	MAP2K3	P46734	347 aa		11.77	□□□□□ -0.53
SCAP-211	ENST00000485967	DSCR9	P59020	149 aa		11.77	□□□□□ -0.53
SCAP-211	ENST00000485967	MRPL28	Q13084	256 aa	Known RBP	11.77	□□□□□ -0.53
SCAP-211	ENST00000485967	OR8G1	Q15617	311 aa		11.77	□□□□□ -0.53
SCAP-211	ENST00000485967	CLEC12B	Q2HXU8	276 aa		11.77	□□□□□ -0.53
SCAP-211	ENST00000485967	FAM209A	Q5JX71	171 aa		11.77	□□□□□ -0.53
SCAP-211	ENST00000485967	CLEC2A	Q6UVW9	174 aa		11.77	□□□□□ -0.53
SCAP-211	ENST00000485967	PRSS57	Q6UWY2	283 aa		11.77	□□□□□ -0.53
SCAP-211	ENST00000485967		Q6ZR03	302 aa		11.77	□□□□□ -0.53
SCAP-211	ENST00000485967	KRTAP1-3	Q8IUG1	177 aa		11.77	□□□□□ -0.53
SCAP-211	ENST00000485967	ZNF786	Q8N393	782 aa		11.77	□□□□□ -0.53
SCAP-211	ENST00000485967	FTMT	Q8N4E7	242 aa		11.77	□□□□□ -0.53
SCAP-211	ENST00000485967	CSNK2A3	Q8NEV1	391 aa		11.77	□□□□□ -0.53
SCAP-211	ENST00000485967	HAVCR2	Q8TDQ0	301 aa		11.77	□□□□□ -0.53
SCAP-211	ENST00000485967	PELI1	Q96FA3	418 aa		11.77	□□□□□ -0.53
SCAP-211	ENST00000485967	LYZL4	Q96KX0	146 aa		11.77	□□□□□ -0.53
SCAP-211	ENST00000485967	SLC30A2	Q9BRI3	323 aa		11.77	□□□□□ -0.53
SCAP-211	ENST00000485967	SAP30L	Q9HAJ7	183 aa		11.77	□□□□□ -0.53
SCAP-211	ENST00000485967	CSPG4	Q6UVK1	2322 aa		11.76	□□□□□ -0.53
SCAP-211	ENST00000485967	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	11.76	□□□□□ -0.53
SCAP-211	ENST00000485967		A0A1B0GVI7	797 aa		11.76	□□□□□ -0.53
SCAP-211	ENST00000485967	MYL12B	O14950	172 aa		11.76	□□□□□ -0.53
SCAP-211	ENST00000485967	LILRA1	O75019	489 aa		11.76	□□□□□ -0.53
SCAP-211	ENST00000485967	HPX	P02790	462 aa		11.76	□□□□□ -0.53
SCAP-211	ENST00000485967	HLA-DPB1	P04440	258 aa		11.76	□□□□□ -0.53
SCAP-211	ENST00000485967	ADH4	P08319	380 aa		11.76	□□□□□ -0.53
SCAP-211	ENST00000485967	CCDC159	P0C7I6	412 aa		11.76	□□□□□ -0.53
SCAP-211	ENST00000485967	ATP6V1B1	P15313	513 aa		11.76	□□□□□ -0.53
SCAP-211	ENST00000485967	PDLIM4	P50479	330 aa		11.76	□□□□□ -0.53
SCAP-211	ENST00000485967	MVK	Q03426	396 aa		11.76	□□□□□ -0.53
SCAP-211	ENST00000485967	WDR38	Q5JTN6	314 aa		11.76	□□□□□ -0.53
SCAP-211	ENST00000485967	RBM48	Q5RL73	367 aa	Known RBP	11.76	□□□□□ -0.53
SCAP-211	ENST00000485967	OR2G6	Q5TZ20	316 aa		11.76	□□□□□ -0.53
SCAP-211	ENST00000485967	ZNF525	Q8N782	197 aa		11.76	□□□□□ -0.53
SCAP-211	ENST00000485967	SEMA6D	Q8NFY4	1073 aa		11.76	□□□□□ -0.53
SCAP-211	ENST00000485967	OR2G2	Q8NGZ5	317 aa		11.76	□□□□□ -0.53
SCAP-211	ENST00000485967	GATAD2B	Q8WXI9	593 aa		11.76	□□□□□ -0.53
SCAP-211	ENST00000485967	RDH5	Q92781	318 aa		11.76	□□□□□ -0.53
SCAP-211	ENST00000485967	ITFG2	Q969R8	447 aa		11.76	□□□□□ -0.53
SCAP-211	ENST00000485967	MYOZ1	Q9NP98	299 aa	Predicted RBP	11.76	□□□□□ -0.53
SCAP-211	ENST00000485967	MRPL15	Q9P015	296 aa	Known RBP	11.76	□□□□□ -0.53
SCAP-211	ENST00000485967	CLEC2D	Q9UHP7	191 aa		11.76	□□□□□ -0.53
SCAP-211	ENST00000485967	BLOC1S6	Q9UL45	172 aa		11.76	□□□□□ -0.53
SCAP-211	ENST00000485967	ERGIC3	Q9Y282	383 aa		11.76	□□□□□ -0.53
SCAP-211	ENST00000485967	ATR	Q13535	2644 aa		11.75	□□□□□ -0.53
SCAP-211	ENST00000485967		H0YL77	283 aa		11.75	□□□□□ -0.53
SCAP-211	ENST00000485967	SYT7	O43581	403 aa		11.75	□□□□□ -0.53
SCAP-211	ENST00000485967	GMDS	O60547	372 aa		11.75	□□□□□ -0.53
SCAP-211	ENST00000485967	CDK1	P06493	297 aa		11.75	□□□□□ -0.53
SCAP-211	ENST00000485967	CSF3	P09919	207 aa		11.75	□□□□□ -0.53
SCAP-211	ENST00000485967	TNFRSF1A	P19438	455 aa		11.75	□□□□□ -0.53
SCAP-211	ENST00000485967	EEF1B2	P24534	225 aa	Known RBP	11.75	□□□□□ -0.53
SCAP-211	ENST00000485967	C21orf33	P30042	268 aa	Predicted RBP	11.75	□□□□□ -0.53
SCAP-211	ENST00000485967	SRP9	P49458	86 aa	Known RBP	11.75	□□□□□ -0.53
SCAP-211	ENST00000485967	CCR9	P51686	369 aa		11.75	□□□□□ -0.53
SCAP-211	ENST00000485967	MZT1	Q08AG7	82 aa		11.75	□□□□□ -0.53
SCAP-211	ENST00000485967	RIPPLY1	Q0D2K3	151 aa		11.75	□□□□□ -0.53
SCAP-211	ENST00000485967	ALKBH1	Q13686	389 aa	Known RBP	11.75	□□□□□ -0.53
SCAP-211	ENST00000485967	TMEM244	Q5VVB8	128 aa		11.75	□□□□□ -0.53
SCAP-211	ENST00000485967	FDX2	Q6P4F2	183 aa		11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms