RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 OR4A8P0C604 315 aa14.63□□□□□ -0.07
VIM-205ENST00000485947 NANOS3P60323 173 aaKnown RBP14.63□□□□□ -0.07
VIM-205ENST00000485947 RPS25P62851 125 aaKnown RBP14.63□□□□□ -0.07
VIM-205ENST00000485947 TUBA1BP68363 451 aa14.63□□□□□ -0.07
VIM-205ENST00000485947 SLC3A1Q07837 685 aa14.63□□□□□ -0.07
VIM-205ENST00000485947 LOXL1Q08397 574 aaPredicted RBP14.63□□□□□ -0.07
VIM-205ENST00000485947 Q71RC1 249 aaPredicted RBP14.63□□□□□ -0.07
VIM-205ENST00000485947 TUBA1AQ71U36 451 aa14.63□□□□□ -0.07
VIM-205ENST00000485947 CATSPERDQ86XM0 798 aa14.63□□□□□ -0.07
VIM-205ENST00000485947 OR5AK2Q8NH90 309 aa14.63□□□□□ -0.07
VIM-205ENST00000485947 OR1F12Q8NHA8 337 aa14.63□□□□□ -0.07
VIM-205ENST00000485947 FGFBP3Q8TAT2 258 aa14.63□□□□□ -0.07
VIM-205ENST00000485947 FAM168AQ92567 244 aa14.63□□□□□ -0.07
VIM-205ENST00000485947 ZNF75AQ96N20 296 aa14.63□□□□□ -0.07
VIM-205ENST00000485947 REPIN1Q9BWE0 567 aaKnown RBP14.63□□□□□ -0.07
VIM-205ENST00000485947 FAM206AQ9NX38 181 aa14.63□□□□□ -0.07
VIM-205ENST00000485947 FRRS1LQ9P0K9 344 aa14.63□□□□□ -0.07
VIM-205ENST00000485947 TLN2Q9Y4G6 2542 aa14.63□□□□□ -0.07
VIM-205ENST00000485947 TMEM269A0A1B0GVZ9 245 aa14.62□□□□□ -0.07
VIM-205ENST00000485947 TRDV1A0A1B0GX56 115 aa14.62□□□□□ -0.07
VIM-205ENST00000485947 OR4C45A6NMZ5 311 aa14.62□□□□□ -0.07
VIM-205ENST00000485947 SLC22A1O15245 554 aa14.62□□□□□ -0.07
VIM-205ENST00000485947 RGS9O75916 674 aaPredicted RBP14.62□□□□□ -0.07
VIM-205ENST00000485947 HLA-HP01893 362 aa14.62□□□□□ -0.07
VIM-205ENST00000485947 CD79AP11912 226 aa14.62□□□□□ -0.07
VIM-205ENST00000485947 ZNF14P17017 642 aaPredicted RBP14.62□□□□□ -0.07
VIM-205ENST00000485947 NR4A1P22736 598 aa14.62□□□□□ -0.07
VIM-205ENST00000485947 CALCRP30988 508 aa14.62□□□□□ -0.07
VIM-205ENST00000485947 CRYBB2P43320 205 aa14.62□□□□□ -0.07
VIM-205ENST00000485947 HTR5AP47898 357 aa14.62□□□□□ -0.07
VIM-205ENST00000485947 TPTEP56180 551 aa14.62□□□□□ -0.07
VIM-205ENST00000485947 RPS23P62266 143 aaKnown RBP14.62□□□□□ -0.07
VIM-205ENST00000485947 RAB1AP62820 205 aa14.62□□□□□ -0.07
VIM-205ENST00000485947 HGFACQ04756 655 aa14.62□□□□□ -0.07
VIM-205ENST00000485947 PLP2Q04941 152 aa14.62□□□□□ -0.07
VIM-205ENST00000485947 CTF1Q16619 201 aa14.62□□□□□ -0.07
VIM-205ENST00000485947 PABPC1L2AQ5JQF8 200 aa14.62□□□□□ -0.07
VIM-205ENST00000485947 WDR38Q5JTN6 314 aa14.62□□□□□ -0.07
VIM-205ENST00000485947 ZNF774Q6NX45 483 aa14.62□□□□□ -0.07
VIM-205ENST00000485947 ZNF283Q8N7M2 679 aa14.62□□□□□ -0.07
VIM-205ENST00000485947 THRSPQ92748 146 aa14.62□□□□□ -0.07
VIM-205ENST00000485947 GHSRQ92847 366 aa14.62□□□□□ -0.07
VIM-205ENST00000485947 C12orf43Q96C57 262 aaKnown RBP14.62□□□□□ -0.07
VIM-205ENST00000485947 RAB1BQ9H0U4 201 aa14.62□□□□□ -0.07
VIM-205ENST00000485947 OR51E2Q9H255 320 aa14.62□□□□□ -0.07
VIM-205ENST00000485947 SP140LQ9H930 580 aa14.62□□□□□ -0.07
VIM-205ENST00000485947 NUFIP1Q9UHK0 495 aaKnown RBP14.62□□□□□ -0.07
VIM-205ENST00000485947 OR52A1Q9UKL2 312 aa14.62□□□□□ -0.07
VIM-205ENST00000485947 ZNF281Q9Y2X9 895 aa14.62□□□□□ -0.07
VIM-205ENST00000485947 ZNF503-AS2A6NEH8 195 aa14.61□□□□□ -0.07
VIM-205ENST00000485947 H3BMQ9 156 aa14.61□□□□□ -0.07
VIM-205ENST00000485947 M0R135 149 aa14.61□□□□□ -0.07
VIM-205ENST00000485947 CD5LO43866 347 aa14.61□□□□□ -0.07
VIM-205ENST00000485947 PNPP00491 289 aa14.61□□□□□ -0.07
VIM-205ENST00000485947 SERPINA5P05154 406 aa14.61□□□□□ -0.07
VIM-205ENST00000485947 PATE4P0C8F1 98 aa14.61□□□□□ -0.07
VIM-205ENST00000485947 ZNF35P13682 527 aa14.61□□□□□ -0.07
VIM-205ENST00000485947 FGF9P31371 208 aaPredicted RBP14.61□□□□□ -0.07
VIM-205ENST00000485947 GLRXP35754 106 aa14.61□□□□□ -0.07
VIM-205ENST00000485947 KIR3DL2P43630 455 aa14.61□□□□□ -0.07
VIM-205ENST00000485947 CX3CR1P49238 355 aa14.61□□□□□ -0.07
VIM-205ENST00000485947 MFGE8Q08431 387 aaPredicted RBP14.61□□□□□ -0.07
VIM-205ENST00000485947 KRTAP27-1Q3LI81 207 aa14.61□□□□□ -0.07
VIM-205ENST00000485947 YIF1BQ5BJH7 314 aa14.61□□□□□ -0.07
VIM-205ENST00000485947 BCL2L15Q5TBC7 163 aa14.61□□□□□ -0.07
VIM-205ENST00000485947 DRAM2Q6UX65 266 aa14.61□□□□□ -0.07
VIM-205ENST00000485947 PRSS35Q8N3Z0 413 aa14.61□□□□□ -0.07
VIM-205ENST00000485947 ZNF676Q8N7Q3 588 aa14.61□□□□□ -0.07
VIM-205ENST00000485947 AKR7LQ8NHP1 331 aa14.61□□□□□ -0.07
VIM-205ENST00000485947 NEU4Q8WWR8 484 aaPredicted RBP14.61□□□□□ -0.07
VIM-205ENST00000485947 ZNF799Q96GE5 643 aa14.61□□□□□ -0.07
VIM-205ENST00000485947 DCLRE1CQ96SD1 692 aaKnown RBP14.61□□□□□ -0.07
VIM-205ENST00000485947 CHCHD6Q9BRQ6 235 aa14.61□□□□□ -0.07
VIM-205ENST00000485947 TMED9Q9BVK6 235 aa14.61□□□□□ -0.07
VIM-205ENST00000485947 NOX3Q9HBY0 568 aa14.61□□□□□ -0.07
VIM-205ENST00000485947 EXOSC4Q9NPD3 245 aaKnown RBP14.61□□□□□ -0.07
VIM-205ENST00000485947 G6PC2Q9NQR9 355 aa14.61□□□□□ -0.07
VIM-205ENST00000485947 GSTK1Q9Y2Q3 226 aa14.61□□□□□ -0.07
VIM-205ENST00000485947 CMAHPQ9Y471 501 aa14.61□□□□□ -0.07
VIM-205ENST00000485947 IQCMA0A1B0GVH7 501 aa14.6□□□□□ -0.07
VIM-205ENST00000485947 GABRPO00591 440 aa14.6□□□□□ -0.07
VIM-205ENST00000485947 GPX5O75715 221 aa14.6□□□□□ -0.07
VIM-205ENST00000485947 GATBO75879 557 aaKnown RBP14.6□□□□□ -0.07
VIM-205ENST00000485947 ZFPL1O95159 310 aa14.6□□□□□ -0.07
VIM-205ENST00000485947 CELA3BP08861 270 aa14.6□□□□□ -0.07
VIM-205ENST00000485947 UBCP0CG48 685 aaKnown RBP14.6□□□□□ -0.07
VIM-205ENST00000485947 THBS4P35443 961 aa14.6□□□□□ -0.07
VIM-205ENST00000485947 PDLIM4P50479 330 aa14.6□□□□□ -0.07
VIM-205ENST00000485947 PRKXP51817 358 aa14.6□□□□□ -0.07
VIM-205ENST00000485947 FABP5Q01469 135 aa14.6□□□□□ -0.07
VIM-205ENST00000485947 KRTAP1-1Q07627 177 aa14.6□□□□□ -0.07
VIM-205ENST00000485947 TMEM244Q5VVB8 128 aa14.6□□□□□ -0.07
VIM-205ENST00000485947 C10orf105Q8TEF2 133 aa14.6□□□□□ -0.07
VIM-205ENST00000485947 PHYHIPQ92561 330 aa14.6□□□□□ -0.07
VIM-205ENST00000485947 RPL3LQ92901 407 aaKnown RBP14.6□□□□□ -0.07
VIM-205ENST00000485947 TMEM203Q969S6 136 aa14.6□□□□□ -0.07
VIM-205ENST00000485947 PDCD1LG2Q9BQ51 273 aa14.6□□□□□ -0.07
VIM-205ENST00000485947 PBOV1Q9GZY1 135 aa14.6□□□□□ -0.07
VIM-205ENST00000485947 GTF2A1LQ9UNN4 478 aa14.6□□□□□ -0.07
VIM-205ENST00000485947 ATRQ13535 2644 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms