RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 MMP28Q9H239 520 aa10□□□□□ -0.81
SSR4-210ENST00000485612 EFCAB1Q9HAE3 211 aa10□□□□□ -0.81
SSR4-210ENST00000485612 DCAF13Q9NV06 445 aaKnown RBP10□□□□□ -0.81
SSR4-210ENST00000485612 ADA2Q9NZK5 511 aa10□□□□□ -0.81
SSR4-210ENST00000485612 DUX4Q9UBX2 424 aa10□□□□□ -0.81
SSR4-210ENST00000485612 FAM96BQ9Y3D0 163 aa10□□□□□ -0.81
SSR4-210ENST00000485612 NOTCH3Q9UM47 2321 aa10□□□□□ -0.81
SSR4-210ENST00000485612 DNAH1Q9P2D7 4330 aa9.99□□□□□ -0.81
SSR4-210ENST00000485612 RNASEK-C17orf49H0YIS7 233 aa9.99□□□□□ -0.81
SSR4-210ENST00000485612 ARPC3O15145 178 aa9.99□□□□□ -0.81
SSR4-210ENST00000485612 GADD45GO95257 159 aa9.99□□□□□ -0.81
SSR4-210ENST00000485612 PTBP3O95758 552 aaKnown RBP9.99□□□□□ -0.81
SSR4-210ENST00000485612 LIPFP07098 398 aa9.99□□□□□ -0.81
SSR4-210ENST00000485612 SLC2A1P11166 492 aa9.99□□□□□ -0.81
SSR4-210ENST00000485612 IGLL1P15814 213 aa9.99□□□□□ -0.81
SSR4-210ENST00000485612 TPTEP56180 551 aa9.99□□□□□ -0.81
SSR4-210ENST00000485612 PRB3Q04118 309 aaPredicted RBP9.99□□□□□ -0.81
SSR4-210ENST00000485612 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.99□□□□□ -0.81
SSR4-210ENST00000485612 ECH1Q13011 328 aa9.99□□□□□ -0.81
SSR4-210ENST00000485612 OR8B8Q15620 311 aa9.99□□□□□ -0.81
SSR4-210ENST00000485612 SLC36A3Q495N2 470 aa9.99□□□□□ -0.81
SSR4-210ENST00000485612 PGBD2Q6P3X8 592 aa9.99□□□□□ -0.81
SSR4-210ENST00000485612 C11orf88Q6PI97 169 aa9.99□□□□□ -0.81
SSR4-210ENST00000485612 C1orf122Q6ZSJ8 110 aa9.99□□□□□ -0.81
SSR4-210ENST00000485612 FAM90A1Q86YD7 464 aa9.99□□□□□ -0.81
SSR4-210ENST00000485612 LNX2Q8N448 690 aa9.99□□□□□ -0.81
SSR4-210ENST00000485612 GCSAMQ8N6F7 178 aa9.99□□□□□ -0.81
SSR4-210ENST00000485612 CYB561A3Q8NBI2 242 aa9.99□□□□□ -0.81
SSR4-210ENST00000485612 OR51L1Q8NGJ5 315 aa9.99□□□□□ -0.81
SSR4-210ENST00000485612 R3HDM4Q96D70 268 aa9.99□□□□□ -0.81
SSR4-210ENST00000485612 SEMA6AQ9H2E6 1030 aa9.99□□□□□ -0.81
SSR4-210ENST00000485612 EGLN3Q9H6Z9 239 aa9.99□□□□□ -0.81
SSR4-210ENST00000485612 KRCC1Q9NPI7 259 aaPredicted RBP9.99□□□□□ -0.81
SSR4-210ENST00000485612 ARGLU1Q9NWB6 273 aaPredicted RBP9.99□□□□□ -0.81
SSR4-210ENST00000485612 C1orf123Q9NWV4 160 aa9.99□□□□□ -0.81
SSR4-210ENST00000485612 ERVK-18Q9QC07 812 aa9.99□□□□□ -0.81
SSR4-210ENST00000485612 PCDHGB5Q9Y5G0 923 aa9.99□□□□□ -0.81
SSR4-210ENST00000485612 WI2-2373I1.2A0A1W2PRP0 233 aa9.98□□□□□ -0.81
SSR4-210ENST00000485612 OOEPA6NGQ2 149 aa9.98□□□□□ -0.81
SSR4-210ENST00000485612 GGT3PA6NGU5 568 aa9.98□□□□□ -0.81
SSR4-210ENST00000485612 OR10H3O60404 316 aa9.98□□□□□ -0.81
SSR4-210ENST00000485612 GRPP07492 148 aa9.98□□□□□ -0.81
SSR4-210ENST00000485612 OTX1P32242 354 aaPredicted RBP9.98□□□□□ -0.81
SSR4-210ENST00000485612 GSSP48637 474 aa9.98□□□□□ -0.81
SSR4-210ENST00000485612 NPY4RP50391 375 aa9.98□□□□□ -0.81
SSR4-210ENST00000485612 EFNB2P52799 333 aa9.98□□□□□ -0.81
SSR4-210ENST00000485612 DLX1P56177 255 aa9.98□□□□□ -0.81
SSR4-210ENST00000485612 ARF6P62330 175 aa9.98□□□□□ -0.81
SSR4-210ENST00000485612 BTN2A1Q7KYR7 527 aa9.98□□□□□ -0.81
SSR4-210ENST00000485612 WDR86Q86TI4 376 aa9.98□□□□□ -0.81
SSR4-210ENST00000485612 KLHDC1Q8N7A1 406 aa9.98□□□□□ -0.81
SSR4-210ENST00000485612 SPERTQ8NA61 448 aa9.98□□□□□ -0.81
SSR4-210ENST00000485612 OR4F17Q8NGA8 305 aa9.98□□□□□ -0.81
SSR4-210ENST00000485612 OR56B2PQ8NGI1 322 aa9.98□□□□□ -0.81
SSR4-210ENST00000485612 OR4F4Q96R69 305 aa9.98□□□□□ -0.81
SSR4-210ENST00000485612 DDOQ99489 341 aa9.98□□□□□ -0.81
SSR4-210ENST00000485612 PPA2Q9H2U2 334 aa9.98□□□□□ -0.81
SSR4-210ENST00000485612 CCDC134Q9H6E4 229 aa9.98□□□□□ -0.81
SSR4-210ENST00000485612 PPP1R3EQ9H7J1 279 aa9.98□□□□□ -0.81
SSR4-210ENST00000485612 SAMD4AQ9UPU9 718 aaKnown RBP9.98□□□□□ -0.81
SSR4-210ENST00000485612 N6AMT1Q9Y5N5 214 aa9.98□□□□□ -0.81
SSR4-210ENST00000485612 A6NLC8 198 aa9.97□□□□□ -0.81
SSR4-210ENST00000485612 DVL1O14640 695 aa9.97□□□□□ -0.81
SSR4-210ENST00000485612 CD33P20138 364 aa9.97□□□□□ -0.81
SSR4-210ENST00000485612 NOS3P29474 1203 aa9.97□□□□□ -0.81
SSR4-210ENST00000485612 RRM2P31350 389 aa9.97□□□□□ -0.81
SSR4-210ENST00000485612 MSX2P35548 267 aaPredicted RBP9.97□□□□□ -0.81
SSR4-210ENST00000485612 PRKXP51817 358 aa9.97□□□□□ -0.81
SSR4-210ENST00000485612 KRT72Q14CN4 511 aa9.97□□□□□ -0.81
SSR4-210ENST00000485612 KLHL22Q53GT1 634 aa9.97□□□□□ -0.81
SSR4-210ENST00000485612 METTL11BQ5VVY1 283 aa9.97□□□□□ -0.81
SSR4-210ENST00000485612 CD276Q5ZPR3 534 aa9.97□□□□□ -0.81
SSR4-210ENST00000485612 PIP4P2Q8N4L2 257 aa9.97□□□□□ -0.81
SSR4-210ENST00000485612 PNLDC1Q8NA58 520 aaKnown RBP9.97□□□□□ -0.81
SSR4-210ENST00000485612 OR8D4Q8NGM9 314 aa9.97□□□□□ -0.81
SSR4-210ENST00000485612 OR9Q1Q8NGQ5 310 aa9.97□□□□□ -0.81
SSR4-210ENST00000485612 ST8SIA4Q92187 359 aa9.97□□□□□ -0.81
SSR4-210ENST00000485612 SPTSSAQ969W0 71 aa9.97□□□□□ -0.81
SSR4-210ENST00000485612 SEH1LQ96EE3 360 aa9.97□□□□□ -0.81
SSR4-210ENST00000485612 NSRP1Q9H0G5 558 aaKnown RBP9.97□□□□□ -0.81
SSR4-210ENST00000485612 ZNF446Q9NWS9 450 aa9.97□□□□□ -0.81
SSR4-210ENST00000485612 COMMD3-BMI1R4GMX3 469 aa9.97□□□□□ -0.81
SSR4-210ENST00000485612 U3KQK5 164 aa9.97□□□□□ -0.81
SSR4-210ENST00000485612 TENM2Q9NT68 2774 aa9.97□□□□□ -0.81
SSR4-210ENST00000485612 TRAV38-1A0A0B4J264 116 aa9.96□□□□□ -0.82
SSR4-210ENST00000485612 hCG_1807616A0A1W2PRN6 198 aa9.96□□□□□ -0.82
SSR4-210ENST00000485612 GMDSO60547 372 aa9.96□□□□□ -0.82
SSR4-210ENST00000485612 CCDC22O60826 627 aa9.96□□□□□ -0.82
SSR4-210ENST00000485612 GYPBP06028 91 aa9.96□□□□□ -0.82
SSR4-210ENST00000485612 FBP1P09467 338 aa9.96□□□□□ -0.82
SSR4-210ENST00000485612 ZNF823P16415 610 aa9.96□□□□□ -0.82
SSR4-210ENST00000485612 KIR2DS4P43632 304 aa9.96□□□□□ -0.82
SSR4-210ENST00000485612 CSNK2BP67870 215 aa9.96□□□□□ -0.82
SSR4-210ENST00000485612 KCNJ8Q15842 424 aa9.96□□□□□ -0.82
SSR4-210ENST00000485612 PCK2Q16822 640 aa9.96□□□□□ -0.82
SSR4-210ENST00000485612 DCXRQ7Z4W1 244 aa9.96□□□□□ -0.82
SSR4-210ENST00000485612 VMO1Q7Z5L0 202 aa9.96□□□□□ -0.82
SSR4-210ENST00000485612 C11orf53Q8IXP5 236 aa9.96□□□□□ -0.82
SSR4-210ENST00000485612 WFDC9Q8NEX5 89 aa9.96□□□□□ -0.82
SSR4-210ENST00000485612 PROKR2Q8NFJ6 384 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms