RNA–Protein interactions for RNA: ENST00000485450.5

USP4-211, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 3,541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-211ENST00000485450 ULK3Q6PHR2 472 aa6.82□□□□□ -1.32
USP4-211ENST00000485450 TTLL10Q6ZVT0 673 aa6.82□□□□□ -1.32
USP4-211ENST00000485450 OR56B1Q8NGI3 324 aa6.82□□□□□ -1.32
USP4-211ENST00000485450 NUDCD2Q8WVJ2 157 aa6.82□□□□□ -1.32
USP4-211ENST00000485450 ARSGQ96EG1 525 aa6.82□□□□□ -1.32
USP4-211ENST00000485450 SMIM8Q96KF7 97 aa6.82□□□□□ -1.32
USP4-211ENST00000485450 PGLYRP3Q96LB9 341 aa6.82□□□□□ -1.32
USP4-211ENST00000485450 PTCHD1Q96NR3 888 aa6.82□□□□□ -1.32
USP4-211ENST00000485450 RPS10P5Q9NQ39 176 aa6.82□□□□□ -1.32
USP4-211ENST00000485450 AHSPQ9NZD4 102 aa6.82□□□□□ -1.32
USP4-211ENST00000485450 PRODH2Q9UF12 536 aa6.82□□□□□ -1.32
USP4-211ENST00000485450 ZNF230Q9UIE0 474 aaPredicted RBP6.82□□□□□ -1.32
USP4-211ENST00000485450 NTNG1Q9Y2I2 539 aa6.82□□□□□ -1.32
USP4-211ENST00000485450 ZNF337Q9Y3M9 751 aa6.82□□□□□ -1.32
USP4-211ENST00000485450 ATG4BQ9Y4P1 393 aa6.82□□□□□ -1.32
USP4-211ENST00000485450 C9J4A7 227 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 C1QL1O75973 258 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 FAUP35544 74 aaKnown RBP6.81□□□□□ -1.32
USP4-211ENST00000485450 RRADP55042 308 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 SLC37A1P57057 533 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 NAAAQ02083 359 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 CBFBQ13951 182 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 HMGN3Q15651 99 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 ODF4Q2M2E3 257 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 ADAM5Q6NVV9 412 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 WDR73Q6P4I2 378 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 UNQ9370/PRO34162Q6UXP9 181 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 Q6ZS92 163 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 C2orf73Q8N5S3 287 aaPredicted RBP6.81□□□□□ -1.32
USP4-211ENST00000485450 EXD3Q8N9H8 876 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 NPRL2Q8WTW4 380 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 ZNF552Q9H707 407 aaPredicted RBP6.81□□□□□ -1.32
USP4-211ENST00000485450 KRCC1Q9NPI7 259 aaPredicted RBP6.81□□□□□ -1.32
USP4-211ENST00000485450 SIRT3Q9NTG7 399 aaPredicted RBP6.81□□□□□ -1.32
USP4-211ENST00000485450 OR14J1Q9UGF5 321 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 CEP250Q9BV73 2442 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 ZZEF1O43149 2961 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 GPR75O95800 540 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 F10P00742 488 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 RLN1P04808 185 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 CD14P08571 375 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 ANXA4P09525 319 aaPredicted RBP6.81□□□□□ -1.32
USP4-211ENST00000485450 NID1P14543 1247 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 SELEP16581 610 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 TCN2P20062 427 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 TAS2R43P59537 309 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 RPS15P62841 145 aaKnown RBP6.81□□□□□ -1.32
USP4-211ENST00000485450 MFAP5Q13361 173 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 BEX5Q5H9J7 111 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 RPS26P11Q5JNZ5 115 aaPredicted RBP6.81□□□□□ -1.32
USP4-211ENST00000485450 FIGNL1Q6PIW4 674 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 KCTD9Q7L273 389 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 ZCCHC10Q8TBK6 192 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 SKA2Q8WVK7 121 aaPredicted RBP6.81□□□□□ -1.32
USP4-211ENST00000485450 PIK3IP1Q96FE7 263 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 FER1L6-AS2Q96M78 137 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 WFDC6Q9BQY6 131 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 C19orf25Q9UFG5 118 aaPredicted RBP6.81□□□□□ -1.32
USP4-211ENST00000485450 UNC13CQ8NB66 2214 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 A0A087WUJ7 227 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 SEC14L6B5MCN3 397 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 TCF21O43680 179 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 TPT1P13693 172 aaKnown RBP6.81□□□□□ -1.32
USP4-211ENST00000485450 BMP7P18075 431 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 ITPKBP27987 946 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 MLF1P58340 268 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 TMPPEQ6ZT21 453 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 NAXEQ8NCW5 288 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 BBS1Q8NFJ9 593 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 OR5M8Q8NGP6 311 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 C15orf40Q8WUR7 153 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 HPSE2Q8WWQ2 592 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 NOL4LQ96MY1 436 aaPredicted RBP6.81□□□□□ -1.32
USP4-211ENST00000485450 A4GALTQ9NPC4 353 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 DOK5Q9P104 306 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 ZNF346Q9UL40 294 aaKnown RBP6.81□□□□□ -1.32
USP4-211ENST00000485450 FOXJ3Q9UPW0 622 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 KPTNQ9Y664 436 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 NBEAQ8NFP9 2946 aa6.81□□□□□ -1.32
USP4-211ENST00000485450 C7orf77A4D0Y5 90 aa6.8□□□□□ -1.32
USP4-211ENST00000485450 CYTIPO60759 359 aa6.8□□□□□ -1.32
USP4-211ENST00000485450 PMS2P2O95744 297 aa6.8□□□□□ -1.32
USP4-211ENST00000485450 MT-ND5P03915 603 aa6.8□□□□□ -1.32
USP4-211ENST00000485450 GZMBP10144 247 aa6.8□□□□□ -1.32
USP4-211ENST00000485450 ARL4DP49703 201 aa6.8□□□□□ -1.32
USP4-211ENST00000485450 CCR4P51679 360 aa6.8□□□□□ -1.32
USP4-211ENST00000485450 KIAA0141Q14154 515 aaPredicted RBP6.8□□□□□ -1.32
USP4-211ENST00000485450 DMKNQ6E0U4 476 aaPredicted RBP6.8□□□□□ -1.32
USP4-211ENST00000485450 PAQR4Q8N4S7 273 aaPredicted RBP6.8□□□□□ -1.32
USP4-211ENST00000485450 ACBD4Q8NC06 268 aa6.8□□□□□ -1.32
USP4-211ENST00000485450 OR10R2Q8NGX6 335 aa6.8□□□□□ -1.32
USP4-211ENST00000485450 OR5AK3PQ8NH89 298 aa6.8□□□□□ -1.32
USP4-211ENST00000485450 PIGXQ8TBF5 258 aa6.8□□□□□ -1.32
USP4-211ENST00000485450 THAP3Q8WTV1 239 aaPredicted RBP6.8□□□□□ -1.32
USP4-211ENST00000485450 SAT2Q96F10 170 aaPredicted RBP6.8□□□□□ -1.32
USP4-211ENST00000485450 FNDC11Q9BVV2 318 aa6.8□□□□□ -1.32
USP4-211ENST00000485450 OR51I1Q9H343 314 aa6.8□□□□□ -1.32
USP4-211ENST00000485450 LPAR2Q9HBW0 351 aa6.8□□□□□ -1.32
USP4-211ENST00000485450 LPAR3Q9UBY5 353 aa6.8□□□□□ -1.32
USP4-211ENST00000485450 SCN2AQ99250 2005 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms