RNA–Protein interactions for RNA: ENST00000485158.1

NUP188-206, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 392 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-206ENST00000485158 ONECUT1Q9UBC0 465 aa11.21□□□□□ -0.61
NUP188-206ENST00000485158 DUX4Q9UBX2 424 aa11.21□□□□□ -0.61
NUP188-206ENST00000485158 IGHV3OR15-7A0A075B7D8 119 aa11.2□□□□□ -0.62
NUP188-206ENST00000485158 TRBV4-1A0A0J9YWV2 114 aa11.2□□□□□ -0.62
NUP188-206ENST00000485158 OR6C68A6NDL8 312 aa11.2□□□□□ -0.62
NUP188-206ENST00000485158 ANKRD61A6NGH8 418 aa11.2□□□□□ -0.62
NUP188-206ENST00000485158 A6NLC8 198 aa11.2□□□□□ -0.62
NUP188-206ENST00000485158 TIPRLO75663 272 aa11.2□□□□□ -0.62
NUP188-206ENST00000485158 SERPINA1P01009 418 aa11.2□□□□□ -0.62
NUP188-206ENST00000485158 PRB2P02812 416 aaPredicted RBP11.2□□□□□ -0.62
NUP188-206ENST00000485158 NOS3P29474 1203 aa11.2□□□□□ -0.62
NUP188-206ENST00000485158 GRK5P34947 590 aa11.2□□□□□ -0.62
NUP188-206ENST00000485158 SAA4P35542 130 aa11.2□□□□□ -0.62
NUP188-206ENST00000485158 LOXL3P58215 753 aa11.2□□□□□ -0.62
NUP188-206ENST00000485158 LIPEQ05469 1076 aa11.2□□□□□ -0.62
NUP188-206ENST00000485158 DBPQ10586 325 aaPredicted RBP11.2□□□□□ -0.62
NUP188-206ENST00000485158 POU4F2Q12837 409 aa11.2□□□□□ -0.62
NUP188-206ENST00000485158 AANATQ16613 207 aa11.2□□□□□ -0.62
NUP188-206ENST00000485158 C8orf82Q6P1X6 216 aaPredicted RBP11.2□□□□□ -0.62
NUP188-206ENST00000485158 WDR82Q6UXN9 313 aa11.2□□□□□ -0.62
NUP188-206ENST00000485158 OR56B2PQ8NGI1 322 aa11.2□□□□□ -0.62
NUP188-206ENST00000485158 C7orf34Q96L11 122 aa11.2□□□□□ -0.62
NUP188-206ENST00000485158 DDOQ99489 341 aa11.2□□□□□ -0.62
NUP188-206ENST00000485158 CCL13Q99616 98 aa11.2□□□□□ -0.62
NUP188-206ENST00000485158 PPA2Q9H2U2 334 aa11.2□□□□□ -0.62
NUP188-206ENST00000485158 MAB21L2Q9Y586 359 aa11.2□□□□□ -0.62
NUP188-206ENST00000485158 hCG_1807616A0A1W2PRN6 198 aa11.19□□□□□ -0.62
NUP188-206ENST00000485158 M0R1W7 72 aa11.19□□□□□ -0.62
NUP188-206ENST00000485158 SLC22A2O15244 555 aa11.19□□□□□ -0.62
NUP188-206ENST00000485158 PAHP00439 452 aa11.19□□□□□ -0.62
NUP188-206ENST00000485158 SLC6A6P31641 620 aa11.19□□□□□ -0.62
NUP188-206ENST00000485158 ELF3P78545 371 aaPredicted RBP11.19□□□□□ -0.62
NUP188-206ENST00000485158 FGD3Q5JSP0 725 aa11.19□□□□□ -0.62
NUP188-206ENST00000485158 NCR3LG1Q68D85 454 aa11.19□□□□□ -0.62
NUP188-206ENST00000485158 STUMQ69YW2 141 aa11.19□□□□□ -0.62
NUP188-206ENST00000485158 FAM216BQ8N7L0 139 aa11.19□□□□□ -0.62
NUP188-206ENST00000485158 OR1M1Q8NGA1 313 aa11.19□□□□□ -0.62
NUP188-206ENST00000485158 OR4K13Q8NH42 304 aa11.19□□□□□ -0.62
NUP188-206ENST00000485158 FANK1Q8TC84 345 aa11.19□□□□□ -0.62
NUP188-206ENST00000485158 LRRC29Q8WV35 223 aa11.19□□□□□ -0.62
NUP188-206ENST00000485158 AJUBAQ96IF1 538 aa11.19□□□□□ -0.62
NUP188-206ENST00000485158 MEGF9Q9H1U4 602 aa11.19□□□□□ -0.62
NUP188-206ENST00000485158 OR52D1Q9H346 318 aa11.19□□□□□ -0.62
NUP188-206ENST00000485158 METTL8Q9H825 291 aaKnown RBP11.19□□□□□ -0.62
NUP188-206ENST00000485158 NECAP2Q9NVZ3 263 aa11.19□□□□□ -0.62
NUP188-206ENST00000485158 ADA2Q9NZK5 511 aa11.19□□□□□ -0.62
NUP188-206ENST00000485158 RYR3Q15413 4870 aa11.19□□□□□ -0.62
NUP188-206ENST00000485158 MEIOCA2RUB1 952 aa11.18□□□□□ -0.62
NUP188-206ENST00000485158 MEGF11A6BM72 1044 aa11.18□□□□□ -0.62
NUP188-206ENST00000485158 HMGB1P1B2RPK0 211 aaPredicted RBP11.18□□□□□ -0.62
NUP188-206ENST00000485158 NME4O00746 187 aa11.18□□□□□ -0.62
NUP188-206ENST00000485158 ACOT8O14734 319 aa11.18□□□□□ -0.62
NUP188-206ENST00000485158 XRCC2O43543 280 aa11.18□□□□□ -0.62
NUP188-206ENST00000485158 NDUFB3O43676 98 aa11.18□□□□□ -0.62
NUP188-206ENST00000485158 XPNPEP2O43895 674 aa11.18□□□□□ -0.62
NUP188-206ENST00000485158 TROVE2P10155 538 aaKnown RBP eCLIP11.18□□□□□ -0.62
NUP188-206ENST00000485158 LRRC10Q5BKY1 277 aa11.18□□□□□ -0.62
NUP188-206ENST00000485158 DTX3Q8N9I9 347 aa11.18□□□□□ -0.62
NUP188-206ENST00000485158 CYB561A3Q8NBI2 242 aa11.18□□□□□ -0.62
NUP188-206ENST00000485158 OR4C15Q8NGM1 316 aa11.18□□□□□ -0.62
NUP188-206ENST00000485158 MRAPQ8TCY5 172 aa11.18□□□□□ -0.62
NUP188-206ENST00000485158 RCN3Q96D15 328 aa11.18□□□□□ -0.62
NUP188-206ENST00000485158 KCNJ15Q99712 375 aa11.18□□□□□ -0.62
NUP188-206ENST00000485158 FAM234AQ9H0X4 552 aa11.18□□□□□ -0.62
NUP188-206ENST00000485158 RAB18Q9NP72 206 aa11.18□□□□□ -0.62
NUP188-206ENST00000485158 CD300AQ9UGN4 299 aa11.18□□□□□ -0.62
NUP188-206ENST00000485158 FOXJ3Q9UPW0 622 aa11.18□□□□□ -0.62
NUP188-206ENST00000485158 SIGLEC9Q9Y336 463 aa11.18□□□□□ -0.62
NUP188-206ENST00000485158 FAM32AQ9Y421 112 aaKnown RBP11.18□□□□□ -0.62
NUP188-206ENST00000485158 ANKRD30BLA7E2S9 258 aa11.17□□□□□ -0.62
NUP188-206ENST00000485158 H3BUX3 64 aa11.17□□□□□ -0.62
NUP188-206ENST00000485158 HLA-DQA2P01906 255 aa11.17□□□□□ -0.62
NUP188-206ENST00000485158 PSKH1P11801 424 aa11.17□□□□□ -0.62
NUP188-206ENST00000485158 ZNF823P16415 610 aa11.17□□□□□ -0.62
NUP188-206ENST00000485158 NAA10P41227 235 aaPredicted RBP11.17□□□□□ -0.62
NUP188-206ENST00000485158 DLX1P56177 255 aa11.17□□□□□ -0.62
NUP188-206ENST00000485158 CAV3P56539 151 aa11.17□□□□□ -0.62
NUP188-206ENST00000485158 FAM3AP98173 230 aa11.17□□□□□ -0.62
NUP188-206ENST00000485158 KLRD1Q13241 179 aa11.17□□□□□ -0.62
NUP188-206ENST00000485158 OXLD1Q5BKU9 147 aa11.17□□□□□ -0.62
NUP188-206ENST00000485158 HCP5Q6MZN7 132 aa11.17□□□□□ -0.62
NUP188-206ENST00000485158 ZNF788Q6ZQV5 615 aa11.17□□□□□ -0.62
NUP188-206ENST00000485158 DPY19L4Q7Z388 723 aa11.17□□□□□ -0.62
NUP188-206ENST00000485158 ZDHHC21Q8IVQ6 265 aa11.17□□□□□ -0.62
NUP188-206ENST00000485158 PNKDQ8N490 385 aa11.17□□□□□ -0.62
NUP188-206ENST00000485158 KLHDC1Q8N7A1 406 aa11.17□□□□□ -0.62
NUP188-206ENST00000485158 OR4C13Q8NGP0 309 aa11.17□□□□□ -0.62
NUP188-206ENST00000485158 OR8S1Q8NH09 359 aa11.17□□□□□ -0.62
NUP188-206ENST00000485158 OR2T6Q8NHC8 308 aa11.17□□□□□ -0.62
NUP188-206ENST00000485158 RP9Q8TA86 221 aaKnown RBP11.17□□□□□ -0.62
NUP188-206ENST00000485158 WIPF2Q8TF74 440 aaPredicted RBP11.17□□□□□ -0.62
NUP188-206ENST00000485158 SEH1LQ96EE3 360 aa11.17□□□□□ -0.62
NUP188-206ENST00000485158 SSX3Q99909 188 aa11.17□□□□□ -0.62
NUP188-206ENST00000485158 HOPXQ9BPY8 73 aaPredicted RBP11.17□□□□□ -0.62
NUP188-206ENST00000485158 IFT27Q9BW83 186 aa11.17□□□□□ -0.62
NUP188-206ENST00000485158 HAO2Q9NYQ3 351 aa11.17□□□□□ -0.62
NUP188-206ENST00000485158 GSTA4O15217 222 aa11.16□□□□□ -0.62
NUP188-206ENST00000485158 RPS27P42677 84 aaKnown RBP11.16□□□□□ -0.62
NUP188-206ENST00000485158 GSK3BP49841 420 aa11.16□□□□□ -0.62
NUP188-206ENST00000485158 SLC7A2P52569 658 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms