RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 PHYHO14832 338 aa13.66□□□□□ -0.22
DDR1-246ENST00000485023 FAM20BO75063 409 aa13.66□□□□□ -0.22
DDR1-246ENST00000485023 ZNF254O75437 659 aa13.66□□□□□ -0.22
DDR1-246ENST00000485023 RPP14O95059 124 aaKnown RBP13.66□□□□□ -0.22
DDR1-246ENST00000485023 IGHV2-5P01817 119 aa13.66□□□□□ -0.22
DDR1-246ENST00000485023 GRPP07492 148 aa13.66□□□□□ -0.22
DDR1-246ENST00000485023 MSMBP08118 114 aa13.66□□□□□ -0.22
DDR1-246ENST00000485023 CFL1P23528 166 aaKnown RBP13.66□□□□□ -0.22
DDR1-246ENST00000485023 POU4F2Q12837 409 aa13.66□□□□□ -0.22
DDR1-246ENST00000485023 ZNF829Q3KNS6 432 aaPredicted RBP13.66□□□□□ -0.22
DDR1-246ENST00000485023 CHRFAM7AQ494W8 412 aa13.66□□□□□ -0.22
DDR1-246ENST00000485023 FAM120AOSQ5T036 256 aa13.66□□□□□ -0.22
DDR1-246ENST00000485023 LPCAT4Q643R3 524 aa13.66□□□□□ -0.22
DDR1-246ENST00000485023 GLCCI1Q86VQ1 547 aa13.66□□□□□ -0.22
DDR1-246ENST00000485023 BOLLQ8N9W6 283 aaKnown RBP13.66□□□□□ -0.22
DDR1-246ENST00000485023 C19orf18Q8NEA5 215 aa13.66□□□□□ -0.22
DDR1-246ENST00000485023 RNFT2Q96EX2 444 aa13.66□□□□□ -0.22
DDR1-246ENST00000485023 C1orf159Q96HA4 380 aa13.66□□□□□ -0.22
DDR1-246ENST00000485023 FAM71F1Q96KD3 344 aaPredicted RBP13.66□□□□□ -0.22
DDR1-246ENST00000485023 MNTQ99583 582 aa13.66□□□□□ -0.22
DDR1-246ENST00000485023 SHARPINQ9H0F6 387 aa13.66□□□□□ -0.22
DDR1-246ENST00000485023 RGCCQ9H4X1 137 aa13.66□□□□□ -0.22
DDR1-246ENST00000485023 MRM2Q9UI43 246 aaKnown RBP13.66□□□□□ -0.22
DDR1-246ENST00000485023 NOP16Q9Y3C1 178 aaKnown RBP13.66□□□□□ -0.22
DDR1-246ENST00000485023 RHBDD3Q9Y3P4 386 aa13.66□□□□□ -0.22
DDR1-246ENST00000485023 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.65□□□□□ -0.22
DDR1-246ENST00000485023 A0A1W2PQL4 384 aaPredicted RBP13.65□□□□□ -0.22
DDR1-246ENST00000485023 A6NLC8 198 aa13.65□□□□□ -0.22
DDR1-246ENST00000485023 LRRC30A6NM36 301 aa13.65□□□□□ -0.22
DDR1-246ENST00000485023 LOC110117498-PIK3R3F6TDL0 507 aa13.65□□□□□ -0.22
DDR1-246ENST00000485023 GMDSO60547 372 aa13.65□□□□□ -0.22
DDR1-246ENST00000485023 PNPP00491 289 aa13.65□□□□□ -0.22
DDR1-246ENST00000485023 IRF2P14316 349 aa13.65□□□□□ -0.22
DDR1-246ENST00000485023 ACKR3P25106 362 aa13.65□□□□□ -0.22
DDR1-246ENST00000485023 PEX2P28328 305 aa13.65□□□□□ -0.22
DDR1-246ENST00000485023 GNALP38405 381 aa13.65□□□□□ -0.22
DDR1-246ENST00000485023 DDOSTP39656 456 aa13.65□□□□□ -0.22
DDR1-246ENST00000485023 GABPB1Q06547 395 aaPredicted RBP13.65□□□□□ -0.22
DDR1-246ENST00000485023 OR8B8Q15620 311 aa13.65□□□□□ -0.22
DDR1-246ENST00000485023 CR1LQ2VPA4 569 aa13.65□□□□□ -0.22
DDR1-246ENST00000485023 DEGS2Q6QHC5 323 aa13.65□□□□□ -0.22
DDR1-246ENST00000485023 ENTHD1Q8IYW4 607 aa13.65□□□□□ -0.22
DDR1-246ENST00000485023 YIPF7Q8N8F6 280 aa13.65□□□□□ -0.22
DDR1-246ENST00000485023 OR11L1Q8NGX0 322 aa13.65□□□□□ -0.22
DDR1-246ENST00000485023 OR51F2Q8NH61 342 aa13.65□□□□□ -0.22
DDR1-246ENST00000485023 OR51E1Q8TCB6 317 aa13.65□□□□□ -0.22
DDR1-246ENST00000485023 TRUB1Q8WWH5 349 aaKnown RBP13.65□□□□□ -0.22
DDR1-246ENST00000485023 BEX2Q9BXY8 128 aa13.65□□□□□ -0.22
DDR1-246ENST00000485023 FN3KRPQ9HA64 309 aa13.65□□□□□ -0.22
DDR1-246ENST00000485023 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.65□□□□□ -0.22
DDR1-246ENST00000485023 PCDHB10Q9UN67 800 aa13.65□□□□□ -0.22
DDR1-246ENST00000485023 FBN3Q75N90 2809 aa13.65□□□□□ -0.22
DDR1-246ENST00000485023 YLPM1P49750 1951 aaKnown RBP13.65□□□□□ -0.22
DDR1-246ENST00000485023 DYSFO75923 2080 aa13.64□□□□□ -0.23
DDR1-246ENST00000485023 LOC100130705A0A1B0GUX0 176 aa13.64□□□□□ -0.23
DDR1-246ENST00000485023 ZNF850A8MQ14 1090 aa13.64□□□□□ -0.23
DDR1-246ENST00000485023 E9PQ18 207 aa13.64□□□□□ -0.23
DDR1-246ENST00000485023 KRT8P05787 483 aa13.64□□□□□ -0.23
DDR1-246ENST00000485023 MDH2P40926 338 aaKnown RBP13.64□□□□□ -0.23
DDR1-246ENST00000485023 MTNR1AP48039 350 aa13.64□□□□□ -0.23
DDR1-246ENST00000485023 SEC61A1P61619 476 aaKnown RBP13.64□□□□□ -0.23
DDR1-246ENST00000485023 SNRPGP62308 76 aaKnown RBP13.64□□□□□ -0.23
DDR1-246ENST00000485023 EGR3Q06889 387 aa13.64□□□□□ -0.23
DDR1-246ENST00000485023 BCL2L15Q5TBC7 163 aa13.64□□□□□ -0.23
DDR1-246ENST00000485023 ZNF826PQ6ZT77 177 aa13.64□□□□□ -0.23
DDR1-246ENST00000485023 WDR86Q86TI4 376 aa13.64□□□□□ -0.23
DDR1-246ENST00000485023 KLHL36Q8N4N3 616 aa13.64□□□□□ -0.23
DDR1-246ENST00000485023 SPICQ8N5J4 248 aa13.64□□□□□ -0.23
DDR1-246ENST00000485023 CELF2-AS1Q8N7Q2 184 aa13.64□□□□□ -0.23
DDR1-246ENST00000485023 TMEM186Q96B77 213 aa13.64□□□□□ -0.23
DDR1-246ENST00000485023 GPR84Q9NQS5 396 aa13.64□□□□□ -0.23
DDR1-246ENST00000485023 FAM118AQ9NWS6 357 aa13.64□□□□□ -0.23
DDR1-246ENST00000485023 HIF1ANQ9NWT6 349 aa13.64□□□□□ -0.23
DDR1-246ENST00000485023 C1orf123Q9NWV4 160 aa13.64□□□□□ -0.23
DDR1-246ENST00000485023 SMPD3Q9NY59 655 aaPredicted RBP13.64□□□□□ -0.23
DDR1-246ENST00000485023 CDC42EP3Q9UKI2 254 aa13.64□□□□□ -0.23
DDR1-246ENST00000485023 R4GMQ9 66 aa13.64□□□□□ -0.23
DDR1-246ENST00000485023 SONP18583 2426 aaKnown RBP13.63□□□□□ -0.23
DDR1-246ENST00000485023 hCG_1807616A0A1W2PRN6 198 aa13.63□□□□□ -0.23
DDR1-246ENST00000485023 H3BSH0 61 aa13.63□□□□□ -0.23
DDR1-246ENST00000485023 IFNL4K9M1U5 179 aa13.63□□□□□ -0.23
DDR1-246ENST00000485023 PLPP2O43688 288 aa13.63□□□□□ -0.23
DDR1-246ENST00000485023 SRSF10O75494 262 aaKnown RBP13.63□□□□□ -0.23
DDR1-246ENST00000485023 OR2T7P0C7T2 308 aa13.63□□□□□ -0.23
DDR1-246ENST00000485023 DCTDP32321 178 aa13.63□□□□□ -0.23
DDR1-246ENST00000485023 CD80P33681 288 aa13.63□□□□□ -0.23
DDR1-246ENST00000485023 GATA4P43694 442 aa13.63□□□□□ -0.23
DDR1-246ENST00000485023 DVL1P1P54792 670 aaPredicted RBP13.63□□□□□ -0.23
DDR1-246ENST00000485023 CSNK2BP67870 215 aa13.63□□□□□ -0.23
DDR1-246ENST00000485023 LCN2P80188 198 aa13.63□□□□□ -0.23
DDR1-246ENST00000485023 PRDX4Q13162 271 aa13.63□□□□□ -0.23
DDR1-246ENST00000485023 TMED1Q13445 227 aa13.63□□□□□ -0.23
DDR1-246ENST00000485023 ODF4Q2M2E3 257 aa13.63□□□□□ -0.23
DDR1-246ENST00000485023 TP53I3Q53FA7 332 aa13.63□□□□□ -0.23
DDR1-246ENST00000485023 DMRTC1Q5HYR2 192 aa13.63□□□□□ -0.23
DDR1-246ENST00000485023 MEDAGQ5VYS4 303 aa13.63□□□□□ -0.23
DDR1-246ENST00000485023 LRRC28Q86X40 367 aaPredicted RBP13.63□□□□□ -0.23
DDR1-246ENST00000485023 PRIMA1Q86XR5 153 aa13.63□□□□□ -0.23
DDR1-246ENST00000485023 ZNF555Q8NEP9 628 aa13.63□□□□□ -0.23
DDR1-246ENST00000485023 DEFB108BQ8NET1 73 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms