RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 OR8B12Q8NGG6 310 aa10.29□□□□□ -0.76
MSH5-216ENST00000484309 OR52H1Q8NGJ2 320 aa10.29□□□□□ -0.76
MSH5-216ENST00000484309 TMEM163Q8TC26 289 aa10.29□□□□□ -0.76
MSH5-216ENST00000484309 CENPNQ96H22 339 aaPredicted RBP10.29□□□□□ -0.76
MSH5-216ENST00000484309 CNN2Q99439 309 aaKnown RBP10.29□□□□□ -0.76
MSH5-216ENST00000484309 PKP2Q99959 881 aa10.29□□□□□ -0.76
MSH5-216ENST00000484309 TMEM246Q9BRR3 403 aa10.29□□□□□ -0.76
MSH5-216ENST00000484309 PRRG3Q9BZD7 231 aa10.29□□□□□ -0.76
MSH5-216ENST00000484309 YIPF3Q9GZM5 350 aa10.29□□□□□ -0.76
MSH5-216ENST00000484309 SLC22A4Q9H015 551 aa10.29□□□□□ -0.76
MSH5-216ENST00000484309 OCEL1Q9H607 264 aa10.29□□□□□ -0.76
MSH5-216ENST00000484309 OPA3Q9H6K4 179 aa10.29□□□□□ -0.76
MSH5-216ENST00000484309 C7orf69Q9H7B7 122 aa10.29□□□□□ -0.76
MSH5-216ENST00000484309 SP140LQ9H930 580 aa10.29□□□□□ -0.76
MSH5-216ENST00000484309 C1orf123Q9NWV4 160 aa10.29□□□□□ -0.76
MSH5-216ENST00000484309 METRNQ9UJH8 293 aa10.29□□□□□ -0.76
MSH5-216ENST00000484309 PPIAL4AQ9Y536 164 aa10.29□□□□□ -0.76
MSH5-216ENST00000484309 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.28□□□□□ -0.76
MSH5-216ENST00000484309 hCG_1807616A0A1W2PRN6 198 aa10.28□□□□□ -0.76
MSH5-216ENST00000484309 TRAPPC2LH3BP13 241 aa10.28□□□□□ -0.76
MSH5-216ENST00000484309 MAGEB4O15481 346 aaPredicted RBP10.28□□□□□ -0.76
MSH5-216ENST00000484309 ACTR3P61158 418 aa10.28□□□□□ -0.76
MSH5-216ENST00000484309 ZNF181Q2M3W8 571 aa10.28□□□□□ -0.76
MSH5-216ENST00000484309 ZNF404Q494X3 552 aa10.28□□□□□ -0.76
MSH5-216ENST00000484309 ESCO2Q56NI9 601 aa10.28□□□□□ -0.76
MSH5-216ENST00000484309 SFRP4Q6FHJ7 346 aaPredicted RBP10.28□□□□□ -0.76
MSH5-216ENST00000484309 MEPCEQ7L2J0 689 aaKnown RBP10.28□□□□□ -0.76
MSH5-216ENST00000484309 WDR86Q86TI4 376 aa10.28□□□□□ -0.76
MSH5-216ENST00000484309 KLBQ86Z14 1044 aa10.28□□□□□ -0.76
MSH5-216ENST00000484309 CELF2-AS1Q8N7Q2 184 aa10.28□□□□□ -0.76
MSH5-216ENST00000484309 OR8S1Q8NH09 359 aa10.28□□□□□ -0.76
MSH5-216ENST00000484309 Q8TCH9 128 aa10.28□□□□□ -0.76
MSH5-216ENST00000484309 TMEM158Q8WZ71 300 aa10.28□□□□□ -0.76
MSH5-216ENST00000484309 LYZL4Q96KX0 146 aa10.28□□□□□ -0.76
MSH5-216ENST00000484309 PAPOLGQ9BWT3 736 aaKnown RBP10.28□□□□□ -0.76
MSH5-216ENST00000484309 FN3KRPQ9HA64 309 aa10.28□□□□□ -0.76
MSH5-216ENST00000484309 H2AFY2Q9P0M6 372 aaPredicted RBP10.28□□□□□ -0.76
MSH5-216ENST00000484309 RNF7Q9UBF6 113 aa10.28□□□□□ -0.76
MSH5-216ENST00000484309 IKZF2Q9UKS7 526 aa10.28□□□□□ -0.76
MSH5-216ENST00000484309 NOP16Q9Y3C1 178 aaKnown RBP10.28□□□□□ -0.76
MSH5-216ENST00000484309 RHBDD3Q9Y3P4 386 aa10.28□□□□□ -0.76
MSH5-216ENST00000484309 C3orf80F5H4A9 247 aa10.27□□□□□ -0.77
MSH5-216ENST00000484309 H3BNX3 289 aa10.27□□□□□ -0.77
MSH5-216ENST00000484309 HAX1O00165 279 aa10.27□□□□□ -0.77
MSH5-216ENST00000484309 TCF21O43680 179 aa10.27□□□□□ -0.77
MSH5-216ENST00000484309 APOL3O95236 402 aa10.27□□□□□ -0.77
MSH5-216ENST00000484309 WNT2P09544 360 aa10.27□□□□□ -0.77
MSH5-216ENST00000484309 EGR1P18146 543 aa10.27□□□□□ -0.77
MSH5-216ENST00000484309 ACKR3P25106 362 aa10.27□□□□□ -0.77
MSH5-216ENST00000484309 GNALP38405 381 aa10.27□□□□□ -0.77
MSH5-216ENST00000484309 DDOSTP39656 456 aa10.27□□□□□ -0.77
MSH5-216ENST00000484309 CSNK2BP67870 215 aa10.27□□□□□ -0.77
MSH5-216ENST00000484309 MFGE8Q08431 387 aaPredicted RBP10.27□□□□□ -0.77
MSH5-216ENST00000484309 OR8B8Q15620 311 aa10.27□□□□□ -0.77
MSH5-216ENST00000484309 AADACL4Q5VUY2 407 aa10.27□□□□□ -0.77
MSH5-216ENST00000484309 NXNL2Q5VZ03 156 aa10.27□□□□□ -0.77
MSH5-216ENST00000484309 KCTD18Q6PI47 426 aaPredicted RBP10.27□□□□□ -0.77
MSH5-216ENST00000484309 PLEKHG7Q6ZR37 379 aa10.27□□□□□ -0.77
MSH5-216ENST00000484309 RHOUQ7L0Q8 258 aa10.27□□□□□ -0.77
MSH5-216ENST00000484309 SLC35F2Q8IXU6 374 aa10.27□□□□□ -0.77
MSH5-216ENST00000484309 ERGIC1Q969X5 290 aa10.27□□□□□ -0.77
MSH5-216ENST00000484309 PPP1R14AQ96A00 147 aa10.27□□□□□ -0.77
MSH5-216ENST00000484309 NEIL1Q96FI4 390 aaPredicted RBP10.27□□□□□ -0.77
MSH5-216ENST00000484309 OR8B4Q96RC9 309 aa10.27□□□□□ -0.77
MSH5-216ENST00000484309 TBX5Q99593 518 aa10.27□□□□□ -0.77
MSH5-216ENST00000484309 SSBP3Q9BWW4 388 aaPredicted RBP10.27□□□□□ -0.77
MSH5-216ENST00000484309 OSBPL10Q9BXB5 764 aa10.27□□□□□ -0.77
MSH5-216ENST00000484309 ADGRL4Q9HBW9 690 aa10.27□□□□□ -0.77
MSH5-216ENST00000484309 OR5V1Q9UGF6 321 aa10.27□□□□□ -0.77
MSH5-216ENST00000484309 OPN4Q9UHM6 478 aa10.27□□□□□ -0.77
MSH5-216ENST00000484309 ENOPH1Q9UHY7 261 aa10.27□□□□□ -0.77
MSH5-216ENST00000484309 GTF2A1LQ9UNN4 478 aa10.27□□□□□ -0.77
MSH5-216ENST00000484309 LRCH1Q9Y2L9 728 aa10.27□□□□□ -0.77
MSH5-216ENST00000484309 IGHV3OR15-7A0A075B7D8 119 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 TMEM269A0A1B0GVZ9 245 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 SLC22A31A6NKX4 558 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 ZNF850A8MQ14 1090 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 A8MXK9 166 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 J3QLI3 93 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 EBAG9O00559 213 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 EI24O14681 340 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 PTBP3O95758 552 aaKnown RBP10.26□□□□□ -0.77
MSH5-216ENST00000484309 EPHA1P21709 976 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 CFL1P23528 166 aaKnown RBP10.26□□□□□ -0.77
MSH5-216ENST00000484309 THBS2P35442 1172 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 PITPNBP48739 271 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 CXCR4P61073 352 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 GNB2P62879 340 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 EFNB1P98172 346 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 POU4F2Q12837 409 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 PRDX4Q13162 271 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 C1QL2Q7Z5L3 287 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 COMMD2Q86X83 199 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 SPERTQ8NA61 448 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 CSNK2A3Q8NEV1 391 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 OR8B3Q8NGG8 313 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 OR51G2Q8NGK0 314 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 C22orf15Q8WYQ4 148 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 PIGCQ92535 297 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 OR8B2Q96RD0 313 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms