RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 HIST3H3Q16695 136 aa17.41■□□□□ 0.38
LIMS2-215ENST00000484252 ZNF574Q6ZN55 896 aaPredicted RBP17.41■□□□□ 0.38
LIMS2-215ENST00000484252 KCTD9Q7L273 389 aa17.41■□□□□ 0.38
LIMS2-215ENST00000484252 OR56B1Q8NGI3 324 aa17.41■□□□□ 0.38
LIMS2-215ENST00000484252 TMEM41AQ96HV5 264 aa17.41■□□□□ 0.38
LIMS2-215ENST00000484252 C1orf147Q96MC9 270 aaPredicted RBP17.41■□□□□ 0.38
LIMS2-215ENST00000484252 ZNF75AQ96N20 296 aa17.41■□□□□ 0.38
LIMS2-215ENST00000484252 SCGB3A2Q96PL1 93 aa17.41■□□□□ 0.38
LIMS2-215ENST00000484252 TMEM59Q9BXS4 323 aa17.41■□□□□ 0.38
LIMS2-215ENST00000484252 SAV1Q9H4B6 383 aaPredicted RBP17.41■□□□□ 0.38
LIMS2-215ENST00000484252 FN3KRPQ9HA64 309 aa17.41■□□□□ 0.38
LIMS2-215ENST00000484252 ASH2LQ9UBL3 628 aa17.41■□□□□ 0.38
LIMS2-215ENST00000484252 C19orf25Q9UFG5 118 aaPredicted RBP17.41■□□□□ 0.38
LIMS2-215ENST00000484252 RARRES3Q9UL19 164 aa17.41■□□□□ 0.38
LIMS2-215ENST00000484252 HDGFL3Q9Y3E1 203 aa17.41■□□□□ 0.38
LIMS2-215ENST00000484252 A0A0A6YYD4 124 aa17.4■□□□□ 0.38
LIMS2-215ENST00000484252 CRHP06850 196 aa17.4■□□□□ 0.38
LIMS2-215ENST00000484252 NAT2P11245 290 aa17.4■□□□□ 0.38
LIMS2-215ENST00000484252 ZNF43P17038 809 aa17.4■□□□□ 0.38
LIMS2-215ENST00000484252 ADH6P28332 368 aa17.4■□□□□ 0.38
LIMS2-215ENST00000484252 CDAP32320 146 aa17.4■□□□□ 0.38
LIMS2-215ENST00000484252 EIF1P41567 113 aaKnown RBP17.4■□□□□ 0.38
LIMS2-215ENST00000484252 ATXN7L3Q14CW9 347 aaPredicted RBP17.4■□□□□ 0.38
LIMS2-215ENST00000484252 TMEM128Q5BJH2 165 aa17.4■□□□□ 0.38
LIMS2-215ENST00000484252 TDHQ8IZJ6 230 aa17.4■□□□□ 0.38
LIMS2-215ENST00000484252 MARCH1Q8TCQ1 289 aa17.4■□□□□ 0.38
LIMS2-215ENST00000484252 USB1Q9BQ65 265 aaKnown RBP17.4■□□□□ 0.38
LIMS2-215ENST00000484252 URM1Q9BTM9 101 aaKnown RBP17.4■□□□□ 0.38
LIMS2-215ENST00000484252 CHMP1AQ9HD42 196 aaPredicted RBP17.4■□□□□ 0.38
LIMS2-215ENST00000484252 PNRC2Q9NPJ4 139 aaKnown RBP17.4■□□□□ 0.38
LIMS2-215ENST00000484252 MBD2Q9UBB5 411 aa17.4■□□□□ 0.38
LIMS2-215ENST00000484252 PRUNE2Q8WUY3 3088 aa17.4■□□□□ 0.38
LIMS2-215ENST00000484252 SPAG17Q6Q759 2223 aa17.4■□□□□ 0.38
LIMS2-215ENST00000484252 A0A0B4J2A0 478 aa17.4■□□□□ 0.38
LIMS2-215ENST00000484252 C5orf51A6NDU8 294 aa17.4■□□□□ 0.38
LIMS2-215ENST00000484252 ZNF726A6NNF4 738 aa17.4■□□□□ 0.38
LIMS2-215ENST00000484252 F5H0A9 414 aaPredicted RBP17.4■□□□□ 0.38
LIMS2-215ENST00000484252 TLX3O43711 291 aaPredicted RBP17.4■□□□□ 0.38
LIMS2-215ENST00000484252 OR2J2O76002 312 aa17.4■□□□□ 0.38
LIMS2-215ENST00000484252 TIAF1O95411 115 aa17.4■□□□□ 0.38
LIMS2-215ENST00000484252 APOC3P02656 99 aa17.4■□□□□ 0.38
LIMS2-215ENST00000484252 GP1BAP07359 652 aa17.4■□□□□ 0.38
LIMS2-215ENST00000484252 HCKP08631 526 aa17.4■□□□□ 0.38
LIMS2-215ENST00000484252 NR2C1P13056 603 aa17.4■□□□□ 0.38
LIMS2-215ENST00000484252 PPIAP62937 165 aaKnown RBP17.4■□□□□ 0.38
LIMS2-215ENST00000484252 MFAP5Q13361 173 aa17.4■□□□□ 0.38
LIMS2-215ENST00000484252 MICBQ29980 383 aa17.4■□□□□ 0.38
LIMS2-215ENST00000484252 PTCRAQ6ISU1 281 aaPredicted RBP17.4■□□□□ 0.38
LIMS2-215ENST00000484252 UQCC3Q6UW78 93 aa17.4■□□□□ 0.38
LIMS2-215ENST00000484252 TMEM185AQ8NFB2 350 aa17.4■□□□□ 0.38
LIMS2-215ENST00000484252 OCSTAMPQ9BR26 566 aa17.4■□□□□ 0.38
LIMS2-215ENST00000484252 PIGMQ9H3S5 423 aa17.4■□□□□ 0.38
LIMS2-215ENST00000484252 SHPKQ9UHJ6 478 aa17.4■□□□□ 0.38
LIMS2-215ENST00000484252 TRBV6-7A0A0A0MS04 114 aa17.39■□□□□ 0.37
LIMS2-215ENST00000484252 A0A1W2PNR3 127 aa17.39■□□□□ 0.37
LIMS2-215ENST00000484252 EEF1E1-BLOC1S5C9J1V9 151 aa17.39■□□□□ 0.37
LIMS2-215ENST00000484252 CYC1P08574 325 aa17.39■□□□□ 0.37
LIMS2-215ENST00000484252 QDPRP09417 244 aa17.39■□□□□ 0.37
LIMS2-215ENST00000484252 IGFBP4P22692 258 aa17.39■□□□□ 0.37
LIMS2-215ENST00000484252 OR3A4PP47883 348 aa17.39■□□□□ 0.37
LIMS2-215ENST00000484252 BEX5Q5H9J7 111 aa17.39■□□□□ 0.37
LIMS2-215ENST00000484252 PLAC9Q5JTB6 97 aa17.39■□□□□ 0.37
LIMS2-215ENST00000484252 PDSS1Q5T2R2 415 aa17.39■□□□□ 0.37
LIMS2-215ENST00000484252 CARD17Q5XLA6 110 aa17.39■□□□□ 0.37
LIMS2-215ENST00000484252 TMEM104Q8NE00 496 aa17.39■□□□□ 0.37
LIMS2-215ENST00000484252 STOML3Q8TAV4 291 aa17.39■□□□□ 0.37
LIMS2-215ENST00000484252 FAM71F1Q96KD3 344 aaPredicted RBP17.39■□□□□ 0.37
LIMS2-215ENST00000484252 CRB3Q9BUF7 120 aa17.39■□□□□ 0.37
LIMS2-215ENST00000484252 GHRLQ9UBU3 117 aa17.39■□□□□ 0.37
LIMS2-215ENST00000484252 NDRG3Q9UGV2 375 aa17.39■□□□□ 0.37
LIMS2-215ENST00000484252 PURGQ9UJV8 347 aaKnown RBP17.39■□□□□ 0.37
LIMS2-215ENST00000484252 AQP7P3A6NL99 342 aa17.38■□□□□ 0.37
LIMS2-215ENST00000484252 H7C2Y5 167 aa17.38■□□□□ 0.37
LIMS2-215ENST00000484252 SOCS1O15524 211 aa17.38■□□□□ 0.37
LIMS2-215ENST00000484252 CTSSP25774 331 aa17.38■□□□□ 0.37
LIMS2-215ENST00000484252 SERPINF1P36955 418 aa17.38■□□□□ 0.37
LIMS2-215ENST00000484252 SHBQ15464 509 aa17.38■□□□□ 0.37
LIMS2-215ENST00000484252 ZNF385CQ66K41 422 aaPredicted RBP17.38■□□□□ 0.37
LIMS2-215ENST00000484252 SPEM1Q8N4L4 309 aa17.38■□□□□ 0.37
LIMS2-215ENST00000484252 ZNF283Q8N7M2 679 aa17.38■□□□□ 0.37
LIMS2-215ENST00000484252 FADS6Q8N9I5 356 aa17.38■□□□□ 0.37
LIMS2-215ENST00000484252 OR4K17Q8NGC6 315 aa17.38■□□□□ 0.37
LIMS2-215ENST00000484252 SPACA9Q96E40 222 aaPredicted RBP17.38■□□□□ 0.37
LIMS2-215ENST00000484252 SPACA5Q96QH8 159 aa17.38■□□□□ 0.37
LIMS2-215ENST00000484252 GPR132Q9UNW8 380 aa17.38■□□□□ 0.37
LIMS2-215ENST00000484252 CEP192Q8TEP8 1941 aa17.38■□□□□ 0.37
LIMS2-215ENST00000484252 MFNGO00587 321 aa17.38■□□□□ 0.37
LIMS2-215ENST00000484252 RER1O15258 196 aa17.38■□□□□ 0.37
LIMS2-215ENST00000484252 PLATP00750 562 aa17.38■□□□□ 0.37
LIMS2-215ENST00000484252 H2AFB1P0C5Y9 115 aa17.38■□□□□ 0.37
LIMS2-215ENST00000484252 SLC2A1P11166 492 aa17.38■□□□□ 0.37
LIMS2-215ENST00000484252 SLC35A1P78382 337 aa17.38■□□□□ 0.37
LIMS2-215ENST00000484252 OR2I1PQ8NGU4 316 aa17.38■□□□□ 0.37
LIMS2-215ENST00000484252 SSC4DQ8WTU2 575 aa17.38■□□□□ 0.37
LIMS2-215ENST00000484252 GPER1Q99527 375 aa17.38■□□□□ 0.37
LIMS2-215ENST00000484252 RAB18Q9NP72 206 aa17.38■□□□□ 0.37
LIMS2-215ENST00000484252 ZNF319Q9P2F9 582 aa17.38■□□□□ 0.37
LIMS2-215ENST00000484252 TEX13DA0A0J9YY54 714 aaPredicted RBP17.37■□□□□ 0.37
LIMS2-215ENST00000484252 F8VVB4 439 aa17.37■□□□□ 0.37
LIMS2-215ENST00000484252 F8VWA3 439 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms