RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 DEFA6Q01524 100 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 DBPQ10586 325 aaPredicted RBP8.44□□□□□ -1.06
CPSF4-213ENST00000484112 HLXQ14774 488 aaPredicted RBP8.44□□□□□ -1.06
CPSF4-213ENST00000484112 OCLNQ16625 522 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 TMEM255AQ5JRV8 349 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 USP51Q70EK9 711 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 PRSS45Q7RTY3 260 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 KRT77Q7Z794 578 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 ZDHHC22Q8N966 263 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 SPERTQ8NA61 448 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 PLPP7Q8NBV4 271 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 OR4M2Q8NGB6 313 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 OR2T27Q8NH04 317 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 NANPQ8TBE9 248 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 FAM81AQ8TBF8 368 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 SPRYD4Q8WW59 207 aaPredicted RBP8.44□□□□□ -1.06
CPSF4-213ENST00000484112 TIMD4Q96H15 378 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 Q96MT0 163 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 TMPRSS13Q9BYE2 586 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 POFUT1Q9H488 388 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 MOB1AQ9H8S9 216 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 ADGRL4Q9HBW9 690 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 ABCB9Q9NP78 766 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 ESM1Q9NQ30 184 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 G6PC2Q9NQR9 355 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 TMEM100Q9NV29 134 aa8.44□□□□□ -1.06
CPSF4-213ENST00000484112 SMPD3Q9NY59 655 aaPredicted RBP8.44□□□□□ -1.06
CPSF4-213ENST00000484112 CD300LBA8K4G0 201 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 CLDN25C9JDP6 229 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 ZNF670-ZNF695F2Z2N8 137 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 ANXA2P07355 339 aaKnown RBP8.43□□□□□ -1.06
CPSF4-213ENST00000484112 ATP6V1B1P15313 513 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 GATA4P43694 442 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 MMP16P51512 607 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 PRKXP51817 358 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 ZNF121P58317 390 aaPredicted RBP8.43□□□□□ -1.06
CPSF4-213ENST00000484112 ACTC1P68032 377 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 ACTA1P68133 377 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 TSTQ16762 297 aaKnown RBP8.43□□□□□ -1.06
CPSF4-213ENST00000484112 TIGD6Q17RP2 521 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 ZNF181Q2M3W8 571 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 ZNF829Q3KNS6 432 aaPredicted RBP8.43□□□□□ -1.06
CPSF4-213ENST00000484112 SNAI3Q3KNW1 292 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 PDLIM3Q53GG5 364 aaPredicted RBP8.43□□□□□ -1.06
CPSF4-213ENST00000484112 PRR31Q5SQ13 230 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 DCAF12L2Q5VW00 463 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 OR2T2Q6IF00 324 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 SHISA2Q6UWI4 295 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 C1QL2Q7Z5L3 287 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 NAA40Q86UY6 237 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 SLC35F2Q8IXU6 374 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 ZNF555Q8NEP9 628 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 CSNK2A3Q8NEV1 391 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 OR2Z1Q8NG97 314 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 RAB1CQ92928 201 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 RAB39BQ96DA2 213 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 OR8B4Q96RC9 309 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 AMELYQ99218 206 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 APOL4Q9BPW4 351 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 ZNF747Q9BV97 191 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 C7orf69Q9H7B7 122 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 DCLRE1BQ9H816 532 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 MSL2Q9HCI7 577 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 LRP12Q9Y561 859 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 GMPPBQ9Y5P6 360 aa8.43□□□□□ -1.06
CPSF4-213ENST00000484112 A0A0U1RQV5 110 aa8.42□□□□□ -1.06
CPSF4-213ENST00000484112 LOC100130705A0A1B0GUX0 176 aa8.42□□□□□ -1.06
CPSF4-213ENST00000484112 GGT3PA6NGU5 568 aa8.42□□□□□ -1.06
CPSF4-213ENST00000484112 CASQ2O14958 399 aaPredicted RBP8.42□□□□□ -1.06
CPSF4-213ENST00000484112 SULT1C4O75897 302 aa8.42□□□□□ -1.06
CPSF4-213ENST00000484112 FPR2P25090 351 aa8.42□□□□□ -1.06
CPSF4-213ENST00000484112 ATP6V1E1P36543 226 aa8.42□□□□□ -1.06
CPSF4-213ENST00000484112 CD200P41217 278 aa8.42□□□□□ -1.06
CPSF4-213ENST00000484112 MTNR1AP48039 350 aa8.42□□□□□ -1.06
CPSF4-213ENST00000484112 RIDAP52758 137 aaKnown RBP8.42□□□□□ -1.06
CPSF4-213ENST00000484112 UBA52P62987 128 aaKnown RBP8.42□□□□□ -1.06
CPSF4-213ENST00000484112 ZNF92Q03936 586 aa8.42□□□□□ -1.06
CPSF4-213ENST00000484112 FOXL1Q12952 345 aa8.42□□□□□ -1.06
CPSF4-213ENST00000484112 IL18R1Q13478 541 aa8.42□□□□□ -1.06
CPSF4-213ENST00000484112 GLYATL3Q5SZD4 288 aa8.42□□□□□ -1.06
CPSF4-213ENST00000484112 TTC23Q5W5X9 447 aa8.42□□□□□ -1.06
CPSF4-213ENST00000484112 ZNF322Q6U7Q0 402 aaPredicted RBP8.42□□□□□ -1.06
CPSF4-213ENST00000484112 RBMS3Q6XE24 437 aaKnown RBP8.42□□□□□ -1.06
CPSF4-213ENST00000484112 Q6ZR03 302 aa8.42□□□□□ -1.06
CPSF4-213ENST00000484112 KRT74Q7RTS7 529 aa8.42□□□□□ -1.06
CPSF4-213ENST00000484112 KCTD20Q7Z5Y7 419 aa8.42□□□□□ -1.06
CPSF4-213ENST00000484112 SGK3Q96BR1 496 aa8.42□□□□□ -1.06
CPSF4-213ENST00000484112 REEP6Q96HR9 211 aa8.42□□□□□ -1.06
CPSF4-213ENST00000484112 PGAM5Q96HS1 289 aa8.42□□□□□ -1.06
CPSF4-213ENST00000484112 DUX5Q96PT3 197 aa8.42□□□□□ -1.06
CPSF4-213ENST00000484112 MBOAT4Q96T53 435 aa8.42□□□□□ -1.06
CPSF4-213ENST00000484112 SLC29A1Q99808 456 aa8.42□□□□□ -1.06
CPSF4-213ENST00000484112 VCXQ9H320 206 aa8.42□□□□□ -1.06
CPSF4-213ENST00000484112 ZNF696Q9H7X3 374 aa8.42□□□□□ -1.06
CPSF4-213ENST00000484112 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.41□□□□□ -1.06
CPSF4-213ENST00000484112 hCG_38984A0A1B0GV85 526 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 TMEM269A0A1B0GVZ9 245 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 LRRC30A6NM36 301 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 ANKRD30BLA7E2S9 258 aa8.41□□□□□ -1.06
CPSF4-213ENST00000484112 J3QLI3 93 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms