RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 UBE2E1P51965 193 aa10.48□□□□□ -0.73
UBR4-213ENST00000483922 TPTEP56180 551 aa10.48□□□□□ -0.73
UBR4-213ENST00000483922 HABP2Q14520 560 aaPredicted RBP10.48□□□□□ -0.73
UBR4-213ENST00000483922 DGUOKQ16854 277 aa10.48□□□□□ -0.73
UBR4-213ENST00000483922 NSUN5P1Q3KNT7 163 aa10.48□□□□□ -0.73
UBR4-213ENST00000483922 IFI44LQ53G44 452 aa10.48□□□□□ -0.73
UBR4-213ENST00000483922 ATPAF1Q5TC12 328 aaPredicted RBP10.48□□□□□ -0.73
UBR4-213ENST00000483922 FOXB2Q5VYV0 432 aa10.48□□□□□ -0.73
UBR4-213ENST00000483922 PGM2L1Q6PCE3 622 aa10.48□□□□□ -0.73
UBR4-213ENST00000483922 CCBE1Q6UXH8 406 aaPredicted RBP10.48□□□□□ -0.73
UBR4-213ENST00000483922 SLC15A3Q8IY34 581 aa10.48□□□□□ -0.73
UBR4-213ENST00000483922 LNX2Q8N448 690 aa10.48□□□□□ -0.73
UBR4-213ENST00000483922 OR56B2PQ8NGI1 322 aa10.48□□□□□ -0.73
UBR4-213ENST00000483922 OR4K13Q8NH42 304 aa10.48□□□□□ -0.73
UBR4-213ENST00000483922 OR5R1Q8NH85 324 aa10.48□□□□□ -0.73
UBR4-213ENST00000483922 C8orf46Q8TAG6 207 aa10.48□□□□□ -0.73
UBR4-213ENST00000483922 HSH2DQ96JZ2 352 aa10.48□□□□□ -0.73
UBR4-213ENST00000483922 DMRTB1Q96MA1 342 aa10.48□□□□□ -0.73
UBR4-213ENST00000483922 SSX3Q99909 188 aa10.48□□□□□ -0.73
UBR4-213ENST00000483922 FGF23Q9GZV9 251 aaPredicted RBP10.48□□□□□ -0.73
UBR4-213ENST00000483922 WDR13Q9H1Z4 485 aa10.48□□□□□ -0.73
UBR4-213ENST00000483922 ANKRD19PQ9H560 264 aa10.48□□□□□ -0.73
UBR4-213ENST00000483922 RPRD1BQ9NQG5 326 aaKnown RBP10.48□□□□□ -0.73
UBR4-213ENST00000483922 SERTAD4Q9NUC0 356 aa10.48□□□□□ -0.73
UBR4-213ENST00000483922 TMEM5Q9Y2B1 443 aa10.48□□□□□ -0.73
UBR4-213ENST00000483922 MAB21L2Q9Y586 359 aa10.48□□□□□ -0.73
UBR4-213ENST00000483922 hCG_1807616A0A1W2PRN6 198 aa10.47□□□□□ -0.73
UBR4-213ENST00000483922 A0A1W2PRQ8 180 aa10.47□□□□□ -0.73
UBR4-213ENST00000483922 BTBD17A6NE02 478 aa10.47□□□□□ -0.73
UBR4-213ENST00000483922 UNC119BA6NIH7 251 aa10.47□□□□□ -0.73
UBR4-213ENST00000483922 A6NLC8 198 aa10.47□□□□□ -0.73
UBR4-213ENST00000483922 K7EIL1 84 aa10.47□□□□□ -0.73
UBR4-213ENST00000483922 BHLHE40O14503 412 aa10.47□□□□□ -0.73
UBR4-213ENST00000483922 DIRAS1O95057 198 aa10.47□□□□□ -0.73
UBR4-213ENST00000483922 MUC1P15941 1255 aaPredicted RBP10.47□□□□□ -0.73
UBR4-213ENST00000483922 RPS6KA3P51812 740 aa10.47□□□□□ -0.73
UBR4-213ENST00000483922 GUCA2AQ02747 115 aa10.47□□□□□ -0.73
UBR4-213ENST00000483922 DGCR6Q14129 220 aa10.47□□□□□ -0.73
UBR4-213ENST00000483922 KLHL12Q53G59 568 aa10.47□□□□□ -0.73
UBR4-213ENST00000483922 STUMQ69YW2 141 aa10.47□□□□□ -0.73
UBR4-213ENST00000483922 SMARCD3Q6STE5 483 aa10.47□□□□□ -0.73
UBR4-213ENST00000483922 SPERTQ8NA61 448 aa10.47□□□□□ -0.73
UBR4-213ENST00000483922 OR1M1Q8NGA1 313 aa10.47□□□□□ -0.73
UBR4-213ENST00000483922 LZICQ8WZA0 190 aa10.47□□□□□ -0.73
UBR4-213ENST00000483922 SGCDQ92629 289 aa10.47□□□□□ -0.73
UBR4-213ENST00000483922 SGK3Q96BR1 496 aa10.47□□□□□ -0.73
UBR4-213ENST00000483922 C7orf34Q96L11 122 aa10.47□□□□□ -0.73
UBR4-213ENST00000483922 ATP6V1G3Q96LB4 118 aa10.47□□□□□ -0.73
UBR4-213ENST00000483922 MEGF9Q9H1U4 602 aa10.47□□□□□ -0.73
UBR4-213ENST00000483922 RNPEPL1Q9HAU8 725 aa10.47□□□□□ -0.73
UBR4-213ENST00000483922 SAR1AQ9NR31 198 aa10.47□□□□□ -0.73
UBR4-213ENST00000483922 SNTG1Q9NSN8 517 aa10.47□□□□□ -0.73
UBR4-213ENST00000483922 NDUFAF4Q9P032 175 aa10.47□□□□□ -0.73
UBR4-213ENST00000483922 AURKCQ9UQB9 309 aa10.47□□□□□ -0.73
UBR4-213ENST00000483922 CAB39Q9Y376 341 aaPredicted RBP10.47□□□□□ -0.73
UBR4-213ENST00000483922 CAPN7Q9Y6W3 813 aa10.47□□□□□ -0.73
UBR4-213ENST00000483922 DYNC2H1Q8NCM8 4307 aaKnown RBP10.47□□□□□ -0.73
UBR4-213ENST00000483922 TVP23AA6NH52 213 aa10.46□□□□□ -0.73
UBR4-213ENST00000483922 CXCR6O00574 342 aa10.46□□□□□ -0.73
UBR4-213ENST00000483922 CDIPTO14735 213 aa10.46□□□□□ -0.73
UBR4-213ENST00000483922 ARPC3O15145 178 aa10.46□□□□□ -0.73
UBR4-213ENST00000483922 SERPINA1P01009 418 aa10.46□□□□□ -0.73
UBR4-213ENST00000483922 H1F0P07305 194 aaKnown RBP10.46□□□□□ -0.73
UBR4-213ENST00000483922 VSIG10L2P0DP72 767 aa10.46□□□□□ -0.73
UBR4-213ENST00000483922 EEF1B2P24534 225 aaKnown RBP10.46□□□□□ -0.73
UBR4-213ENST00000483922 PYCR1P32322 319 aa10.46□□□□□ -0.73
UBR4-213ENST00000483922 PRKXP51817 358 aa10.46□□□□□ -0.73
UBR4-213ENST00000483922 FAM3AP98173 230 aa10.46□□□□□ -0.73
UBR4-213ENST00000483922 LIPEQ05469 1076 aa10.46□□□□□ -0.73
UBR4-213ENST00000483922 SF3A3Q12874 501 aaKnown RBP eCLIP10.46□□□□□ -0.73
UBR4-213ENST00000483922 MICBQ29980 383 aa10.46□□□□□ -0.73
UBR4-213ENST00000483922 ZNF788Q6ZQV5 615 aa10.46□□□□□ -0.73
UBR4-213ENST00000483922 Q6ZS46 218 aa10.46□□□□□ -0.73
UBR4-213ENST00000483922 RRM2BQ7LG56 351 aa10.46□□□□□ -0.73
UBR4-213ENST00000483922 C11orf42Q8N5U0 333 aa10.46□□□□□ -0.73
UBR4-213ENST00000483922 SDR9C7Q8NEX9 313 aa10.46□□□□□ -0.73
UBR4-213ENST00000483922 OR2AJ1Q8NGZ0 328 aa10.46□□□□□ -0.73
UBR4-213ENST00000483922 SPSB4Q96A44 273 aa10.46□□□□□ -0.73
UBR4-213ENST00000483922 GAFA1Q96PS6 74 aa10.46□□□□□ -0.73
UBR4-213ENST00000483922 TMEM120AQ9BXJ8 343 aa10.46□□□□□ -0.73
UBR4-213ENST00000483922 TLNRD1Q9H1K6 362 aa10.46□□□□□ -0.73
UBR4-213ENST00000483922 ZNF702PQ9H963 129 aa10.46□□□□□ -0.73
UBR4-213ENST00000483922 ZNF319Q9P2F9 582 aa10.46□□□□□ -0.73
UBR4-213ENST00000483922 NME4O00746 187 aa10.45□□□□□ -0.74
UBR4-213ENST00000483922 NDUFB3O43676 98 aa10.45□□□□□ -0.74
UBR4-213ENST00000483922 PAHP00439 452 aa10.45□□□□□ -0.74
UBR4-213ENST00000483922 NCK1P16333 377 aa10.45□□□□□ -0.74
UBR4-213ENST00000483922 ERVFRD-1P60508 538 aa10.45□□□□□ -0.74
UBR4-213ENST00000483922 GMFBP60983 142 aa10.45□□□□□ -0.74
UBR4-213ENST00000483922 MXRA7P84157 204 aa10.45□□□□□ -0.74
UBR4-213ENST00000483922 ACSM1Q08AH1 577 aa10.45□□□□□ -0.74
UBR4-213ENST00000483922 SLC36A3Q495N2 470 aa10.45□□□□□ -0.74
UBR4-213ENST00000483922 SLC35F1Q5T1Q4 408 aa10.45□□□□□ -0.74
UBR4-213ENST00000483922 CGB2Q6NT52 195 aa10.45□□□□□ -0.74
UBR4-213ENST00000483922 DNM1P34Q6PK57 102 aa10.45□□□□□ -0.74
UBR4-213ENST00000483922 DRAM2Q6UX65 266 aa10.45□□□□□ -0.74
UBR4-213ENST00000483922 FKBP9P1Q75LS8 142 aa10.45□□□□□ -0.74
UBR4-213ENST00000483922 DPY19L4Q7Z388 723 aa10.45□□□□□ -0.74
UBR4-213ENST00000483922 CMTM4Q8IZR5 234 aa10.45□□□□□ -0.74
UBR4-213ENST00000483922 DYNAPQ8N1N2 210 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms