RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 BABAM2Q9NXR7 383 aa15.2■□□□□ 0.02
CPNE1-224ENST00000483359 LRCH1Q9Y2L9 728 aa15.2■□□□□ 0.02
CPNE1-224ENST00000483359 LOC107986453A0A1B0GWG9 222 aa15.2■□□□□ 0.02
CPNE1-224ENST00000483359 A6NIN4 97 aa15.2■□□□□ 0.02
CPNE1-224ENST00000483359 C17orf100A8MU93 164 aa15.2■□□□□ 0.02
CPNE1-224ENST00000483359 H7C417 338 aa15.2■□□□□ 0.02
CPNE1-224ENST00000483359 IGLV3-1P01715 115 aa15.2■□□□□ 0.02
CPNE1-224ENST00000483359 GABARAPL2P60520 117 aa15.2■□□□□ 0.02
CPNE1-224ENST00000483359 TSTQ16762 297 aaKnown RBP15.2■□□□□ 0.02
CPNE1-224ENST00000483359 OR2Z1Q8NG97 314 aa15.2■□□□□ 0.02
CPNE1-224ENST00000483359 PPP1R3EQ9H7J1 279 aa15.2■□□□□ 0.02
CPNE1-224ENST00000483359 ZNF391Q9UJN7 358 aa15.2■□□□□ 0.02
CPNE1-224ENST00000483359 SIRT4Q9Y6E7 314 aaPredicted RBP15.2■□□□□ 0.02
CPNE1-224ENST00000483359 TRBV2A0A0J9YWF9 115 aa15.19■□□□□ 0.02
CPNE1-224ENST00000483359 A0A1B0GTI1 187 aa15.19■□□□□ 0.02
CPNE1-224ENST00000483359 A0A1B0GVI7 797 aa15.19■□□□□ 0.02
CPNE1-224ENST00000483359 H0YL77 283 aa15.19■□□□□ 0.02
CPNE1-224ENST00000483359 SYT7O43581 403 aa15.19■□□□□ 0.02
CPNE1-224ENST00000483359 IGHV1-46P01743 117 aa15.19■□□□□ 0.02
CPNE1-224ENST00000483359 UBCP0CG48 685 aaKnown RBP15.19■□□□□ 0.02
CPNE1-224ENST00000483359 CA6P23280 308 aa15.19■□□□□ 0.02
CPNE1-224ENST00000483359 PTH2RP49190 550 aa15.19■□□□□ 0.02
CPNE1-224ENST00000483359 ATP5J2P56134 94 aa15.19■□□□□ 0.02
CPNE1-224ENST00000483359 CCL8P80075 99 aa15.19■□□□□ 0.02
CPNE1-224ENST00000483359 MRPL28Q13084 256 aaKnown RBP15.19■□□□□ 0.02
CPNE1-224ENST00000483359 IRF3Q14653 427 aa15.19■□□□□ 0.02
CPNE1-224ENST00000483359 OR8B8Q15620 311 aa15.19■□□□□ 0.02
CPNE1-224ENST00000483359 FDX2Q6P4F2 183 aa15.19■□□□□ 0.02
CPNE1-224ENST00000483359 ZNF676Q8N7Q3 588 aa15.19■□□□□ 0.02
CPNE1-224ENST00000483359 NINJ1Q92982 152 aa15.19■□□□□ 0.02
CPNE1-224ENST00000483359 VPS13CQ709C8 3753 aa15.19■□□□□ 0.02
CPNE1-224ENST00000483359 IGHV3-64DA0A0J9YX35 117 aa15.18■□□□□ 0.02
CPNE1-224ENST00000483359 OR4C45A6NMZ5 311 aa15.18■□□□□ 0.02
CPNE1-224ENST00000483359 TPD52L2O43399 206 aaKnown RBP15.18■□□□□ 0.02
CPNE1-224ENST00000483359 DHRS3O75911 302 aa15.18■□□□□ 0.02
CPNE1-224ENST00000483359 ZFPL1O95159 310 aa15.18■□□□□ 0.02
CPNE1-224ENST00000483359 CDK5R1Q15078 307 aa15.18■□□□□ 0.02
CPNE1-224ENST00000483359 ZMAT1Q5H9K5 638 aa15.18■□□□□ 0.02
CPNE1-224ENST00000483359 OR51A4Q8NGJ6 313 aa15.18■□□□□ 0.02
CPNE1-224ENST00000483359 OR10AC1Q8NH08 325 aa15.18■□□□□ 0.02
CPNE1-224ENST00000483359 ELMOD3Q96FG2 381 aa15.18■□□□□ 0.02
CPNE1-224ENST00000483359 TRMT61AQ96FX7 289 aaKnown RBP15.18■□□□□ 0.02
CPNE1-224ENST00000483359 PAPOLGQ9BWT3 736 aaKnown RBP15.18■□□□□ 0.02
CPNE1-224ENST00000483359 RAB1BQ9H0U4 201 aa15.18■□□□□ 0.02
CPNE1-224ENST00000483359 CYSLTR2Q9NS75 346 aa15.18■□□□□ 0.02
CPNE1-224ENST00000483359 CGGBP1Q9UFW8 167 aaPredicted RBP15.18■□□□□ 0.02
CPNE1-224ENST00000483359 PIGLQ9Y2B2 252 aa15.18■□□□□ 0.02
CPNE1-224ENST00000483359 MLNRO43193 412 aa15.18■□□□□ 0.02
CPNE1-224ENST00000483359 LMX1BO60663 402 aa15.18■□□□□ 0.02
CPNE1-224ENST00000483359 NCR1O76036 304 aa15.18■□□□□ 0.02
CPNE1-224ENST00000483359 IGHV4-39P01824 125 aa15.18■□□□□ 0.02
CPNE1-224ENST00000483359 FAHP16930 419 aa15.18■□□□□ 0.02
CPNE1-224ENST00000483359 TGM4P49221 684 aa15.18■□□□□ 0.02
CPNE1-224ENST00000483359 CCR9P51686 369 aa15.18■□□□□ 0.02
CPNE1-224ENST00000483359 SLC3A1Q07837 685 aa15.18■□□□□ 0.02
CPNE1-224ENST00000483359 DMRTC1Q5HYR2 192 aa15.18■□□□□ 0.02
CPNE1-224ENST00000483359 RNLSQ5VYX0 342 aa15.18■□□□□ 0.02
CPNE1-224ENST00000483359 RPL22L1Q6P5R6 122 aaKnown RBP15.18■□□□□ 0.02
CPNE1-224ENST00000483359 DOK3Q7L591 496 aa15.18■□□□□ 0.02
CPNE1-224ENST00000483359 SEMA6DQ8NFY4 1073 aa15.18■□□□□ 0.02
CPNE1-224ENST00000483359 OR5AK2Q8NH90 309 aa15.18■□□□□ 0.02
CPNE1-224ENST00000483359 SLC30A2Q9BRI3 323 aa15.18■□□□□ 0.02
CPNE1-224ENST00000483359 ADAT1Q9BUB4 502 aaKnown RBP15.18■□□□□ 0.02
CPNE1-224ENST00000483359 TMEM100Q9NV29 134 aa15.18■□□□□ 0.02
CPNE1-224ENST00000483359 BEX4Q9NWD9 120 aaPredicted RBP15.18■□□□□ 0.02
CPNE1-224ENST00000483359 ITGB1BP2Q9UKP3 347 aa15.18■□□□□ 0.02
CPNE1-224ENST00000483359 LSM2Q9Y333 95 aaKnown RBP15.18■□□□□ 0.02
CPNE1-224ENST00000483359 RHBDD3Q9Y3P4 386 aa15.18■□□□□ 0.02
CPNE1-224ENST00000483359 ANKRD30BLA7E2S9 258 aa15.17■□□□□ 0.02
CPNE1-224ENST00000483359 HSMCR30P0CW71 290 aa15.17■□□□□ 0.02
CPNE1-224ENST00000483359 LIPAP38571 399 aa15.17■□□□□ 0.02
CPNE1-224ENST00000483359 CHN2P52757 468 aa15.17■□□□□ 0.02
CPNE1-224ENST00000483359 SPHARQ15513 63 aa15.17■□□□□ 0.02
CPNE1-224ENST00000483359 EGFL6Q8IUX8 553 aa15.17■□□□□ 0.02
CPNE1-224ENST00000483359 OR13G1Q8NGZ3 307 aa15.17■□□□□ 0.02
CPNE1-224ENST00000483359 YTHDF1Q9BYJ9 559 aaKnown RBP15.17■□□□□ 0.02
CPNE1-224ENST00000483359 COMMD4Q9H0A8 199 aa15.17■□□□□ 0.02
CPNE1-224ENST00000483359 PLEKHA1Q9HB21 404 aa15.17■□□□□ 0.02
CPNE1-224ENST00000483359 ZNF701Q9NV72 531 aaPredicted RBP15.17■□□□□ 0.02
CPNE1-224ENST00000483359 MRPL15Q9P015 296 aaKnown RBP15.17■□□□□ 0.02
CPNE1-224ENST00000483359 FBXO9Q9UK97 447 aaPredicted RBP15.17■□□□□ 0.02
CPNE1-224ENST00000483359 F5H5P2 479 aa15.16■□□□□ 0.02
CPNE1-224ENST00000483359 MTRF1O75570 445 aaKnown RBP15.16■□□□□ 0.02
CPNE1-224ENST00000483359 ERCC1P07992 297 aaPredicted RBP15.16■□□□□ 0.02
CPNE1-224ENST00000483359 DDOSTP39656 456 aa15.16■□□□□ 0.02
CPNE1-224ENST00000483359 MAP2K3P46734 347 aa15.16■□□□□ 0.02
CPNE1-224ENST00000483359 HNRNPA0Q13151 305 aaKnown RBP15.16■□□□□ 0.02
CPNE1-224ENST00000483359 CCDC58Q4VC31 144 aa15.16■□□□□ 0.02
CPNE1-224ENST00000483359 SPRNQ5BIV9 151 aa15.16■□□□□ 0.02
CPNE1-224ENST00000483359 TMEM244Q5VVB8 128 aa15.16■□□□□ 0.02
CPNE1-224ENST00000483359 OR14K1Q8NGZ2 314 aa15.16■□□□□ 0.02
CPNE1-224ENST00000483359 HAVCR2Q8TDQ0 301 aa15.16■□□□□ 0.02
CPNE1-224ENST00000483359 SMIM19Q96E16 107 aa15.16■□□□□ 0.02
CPNE1-224ENST00000483359 TMEM212A6NML5 194 aa15.16■□□□□ 0.02
CPNE1-224ENST00000483359 HPXP02790 462 aa15.16■□□□□ 0.02
CPNE1-224ENST00000483359 CELP19835 753 aa15.16■□□□□ 0.02
CPNE1-224ENST00000483359 CCL1P22362 96 aa15.16■□□□□ 0.02
CPNE1-224ENST00000483359 RBMXP38159 391 aaKnown RBP15.16■□□□□ 0.02
CPNE1-224ENST00000483359 TNFAIP6P98066 277 aaPredicted RBP15.16■□□□□ 0.02
CPNE1-224ENST00000483359 OR8G1Q15617 311 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms