RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 SPTSSAQ969W0 71 aa11.46□□□□□ -0.57
VARS-226ENST00000483275 CCL13Q99616 98 aa11.46□□□□□ -0.57
VARS-226ENST00000483275 COPS4Q9BT78 406 aa11.46□□□□□ -0.57
VARS-226ENST00000483275 SIRT7Q9NRC8 400 aa11.46□□□□□ -0.57
VARS-226ENST00000483275 DCAF13Q9NV06 445 aaKnown RBP11.46□□□□□ -0.57
VARS-226ENST00000483275 ABCD2Q9UBJ2 740 aa11.46□□□□□ -0.57
VARS-226ENST00000483275 RPUSD1Q9UJJ7 312 aaKnown RBP11.46□□□□□ -0.57
VARS-226ENST00000483275 TRAV38-1A0A0B4J264 116 aa11.45□□□□□ -0.58
VARS-226ENST00000483275 SLC22A31A6NKX4 558 aa11.45□□□□□ -0.58
VARS-226ENST00000483275 GMDSO60547 372 aa11.45□□□□□ -0.58
VARS-226ENST00000483275 SEMG1P04279 462 aa11.45□□□□□ -0.58
VARS-226ENST00000483275 GYPBP06028 91 aa11.45□□□□□ -0.58
VARS-226ENST00000483275 SPARCP09486 303 aa11.45□□□□□ -0.58
VARS-226ENST00000483275 ZNF823P16415 610 aa11.45□□□□□ -0.58
VARS-226ENST00000483275 BPIFB3P59826 476 aa11.45□□□□□ -0.58
VARS-226ENST00000483275 IKZF1Q13422 519 aa11.45□□□□□ -0.58
VARS-226ENST00000483275 KCNJ8Q15842 424 aa11.45□□□□□ -0.58
VARS-226ENST00000483275 OCLNQ16625 522 aa11.45□□□□□ -0.58
VARS-226ENST00000483275 WDR38Q5JTN6 314 aa11.45□□□□□ -0.58
VARS-226ENST00000483275 DCXRQ7Z4W1 244 aa11.45□□□□□ -0.58
VARS-226ENST00000483275 LDLRAD3Q86YD5 345 aa11.45□□□□□ -0.58
VARS-226ENST00000483275 LRRC29Q8WV35 223 aa11.45□□□□□ -0.58
VARS-226ENST00000483275 CENPMQ9NSP4 180 aa11.45□□□□□ -0.58
VARS-226ENST00000483275 ARL8BQ9NVJ2 186 aa11.45□□□□□ -0.58
VARS-226ENST00000483275 COMMD3-BMI1R4GMX3 469 aa11.45□□□□□ -0.58
VARS-226ENST00000483275 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.44□□□□□ -0.58
VARS-226ENST00000483275 BHLHE40O14503 412 aa11.44□□□□□ -0.58
VARS-226ENST00000483275 ACOT8O14734 319 aa11.44□□□□□ -0.58
VARS-226ENST00000483275 TBX1O43435 398 aa11.44□□□□□ -0.58
VARS-226ENST00000483275 LIPFP07098 398 aa11.44□□□□□ -0.58
VARS-226ENST00000483275 RRM2P31350 389 aa11.44□□□□□ -0.58
VARS-226ENST00000483275 OTX1P32242 354 aaPredicted RBP11.44□□□□□ -0.58
VARS-226ENST00000483275 GSSP48637 474 aa11.44□□□□□ -0.58
VARS-226ENST00000483275 EGR3Q06889 387 aa11.44□□□□□ -0.58
VARS-226ENST00000483275 GFOD2Q3B7J2 385 aa11.44□□□□□ -0.58
VARS-226ENST00000483275 DHRS7BQ6IAN0 325 aaPredicted RBP11.44□□□□□ -0.58
VARS-226ENST00000483275 PGBD2Q6P3X8 592 aa11.44□□□□□ -0.58
VARS-226ENST00000483275 PGAM4Q8N0Y7 254 aa11.44□□□□□ -0.58
VARS-226ENST00000483275 ZNF511Q8NB15 262 aa11.44□□□□□ -0.58
VARS-226ENST00000483275 OR9Q2Q8NGE9 314 aa11.44□□□□□ -0.58
VARS-226ENST00000483275 OR8D4Q8NGM9 314 aa11.44□□□□□ -0.58
VARS-226ENST00000483275 NSL1Q96IY1 281 aa11.44□□□□□ -0.58
VARS-226ENST00000483275 SLC22A4Q9H015 551 aa11.44□□□□□ -0.58
VARS-226ENST00000483275 FAM53CQ9NYF3 392 aa11.44□□□□□ -0.58
VARS-226ENST00000483275 MRPL15Q9P015 296 aaKnown RBP11.44□□□□□ -0.58
VARS-226ENST00000483275 SAMD4AQ9UPU9 718 aaKnown RBP11.44□□□□□ -0.58
VARS-226ENST00000483275 FAM96BQ9Y3D0 163 aa11.44□□□□□ -0.58
VARS-226ENST00000483275 PLXNB1O43157 2135 aa11.43□□□□□ -0.58
VARS-226ENST00000483275 CLPXO76031 633 aa11.43□□□□□ -0.58
VARS-226ENST00000483275 LHBP01229 141 aa11.43□□□□□ -0.58
VARS-226ENST00000483275 PRB2P02812 416 aaPredicted RBP11.43□□□□□ -0.58
VARS-226ENST00000483275 CLUP10909 449 aa11.43□□□□□ -0.58
VARS-226ENST00000483275 CDONQ4KMG0 1287 aa11.43□□□□□ -0.58
VARS-226ENST00000483275 SAMD4BQ5PRF9 694 aaKnown RBP11.43□□□□□ -0.58
VARS-226ENST00000483275 TEX36Q5VZQ5 186 aa11.43□□□□□ -0.58
VARS-226ENST00000483275 DRAM2Q6UX65 266 aa11.43□□□□□ -0.58
VARS-226ENST00000483275 ZDHHC21Q8IVQ6 265 aa11.43□□□□□ -0.58
VARS-226ENST00000483275 C11orf53Q8IXP5 236 aa11.43□□□□□ -0.58
VARS-226ENST00000483275 OR5T2Q8NGG2 359 aa11.43□□□□□ -0.58
VARS-226ENST00000483275 OR8S1Q8NH09 359 aa11.43□□□□□ -0.58
VARS-226ENST00000483275 BCAS4Q8TDM0 211 aa11.43□□□□□ -0.58
VARS-226ENST00000483275 SLAMF6Q96DU3 332 aa11.43□□□□□ -0.58
VARS-226ENST00000483275 ZNRD1Q9P1U0 126 aa11.43□□□□□ -0.58
VARS-226ENST00000483275 SIGLEC9Q9Y336 463 aa11.43□□□□□ -0.58
VARS-226ENST00000483275 NOP16Q9Y3C1 178 aaKnown RBP11.43□□□□□ -0.58
VARS-226ENST00000483275 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.42□□□□□ -0.58
VARS-226ENST00000483275 ZNF816-ZNF321PA0A0X1KG74 233 aa11.42□□□□□ -0.58
VARS-226ENST00000483275 RNASEK-C17orf49H0YIS7 233 aa11.42□□□□□ -0.58
VARS-226ENST00000483275 PAX6P26367 422 aa11.42□□□□□ -0.58
VARS-226ENST00000483275 TAF13Q15543 124 aa11.42□□□□□ -0.58
VARS-226ENST00000483275 SLC16A9Q7RTY1 509 aa11.42□□□□□ -0.58
VARS-226ENST00000483275 DEFB107AQ8IZN7 70 aa11.42□□□□□ -0.58
VARS-226ENST00000483275 C11orf44Q8N8P7 122 aa11.42□□□□□ -0.58
VARS-226ENST00000483275 ZSCAN4Q8NAM6 433 aaPredicted RBP11.42□□□□□ -0.58
VARS-226ENST00000483275 SLC37A3Q8NCC5 494 aa11.42□□□□□ -0.58
VARS-226ENST00000483275 C17orf50Q8WW18 174 aa11.42□□□□□ -0.58
VARS-226ENST00000483275 H1FXQ92522 213 aaKnown RBP11.42□□□□□ -0.58
VARS-226ENST00000483275 PYURFQ96I23 114 aa11.42□□□□□ -0.58
VARS-226ENST00000483275 CDRT15Q96T59 188 aa11.42□□□□□ -0.58
VARS-226ENST00000483275 DDOQ99489 341 aa11.42□□□□□ -0.58
VARS-226ENST00000483275 BTBD10Q9BSF8 475 aa11.42□□□□□ -0.58
VARS-226ENST00000483275 CNTD2Q9H8S5 307 aa11.42□□□□□ -0.58
VARS-226ENST00000483275 TRIM36Q9NQ86 728 aa11.42□□□□□ -0.58
VARS-226ENST00000483275 SNTG1Q9NSN8 517 aa11.42□□□□□ -0.58
VARS-226ENST00000483275 DNAJC27Q9NZQ0 273 aa11.42□□□□□ -0.58
VARS-226ENST00000483275 MAGEL2Q9UJ55 1249 aa11.42□□□□□ -0.58
VARS-226ENST00000483275 KCNG2Q9UJ96 466 aa11.42□□□□□ -0.58
VARS-226ENST00000483275 VPREB3Q9UKI3 123 aa11.42□□□□□ -0.58
VARS-226ENST00000483275 CDH10Q9Y6N8 788 aa11.42□□□□□ -0.58
VARS-226ENST00000483275 NOTCH3Q9UM47 2321 aa11.41□□□□□ -0.58
VARS-226ENST00000483275 ANKRD30BLA7E2S9 258 aa11.41□□□□□ -0.58
VARS-226ENST00000483275 B2RBV5 119 aa11.41□□□□□ -0.58
VARS-226ENST00000483275 G3V4G9 280 aa11.41□□□□□ -0.58
VARS-226ENST00000483275 NPFFO15130 113 aa11.41□□□□□ -0.58
VARS-226ENST00000483275 ARPC2O15144 300 aa11.41□□□□□ -0.58
VARS-226ENST00000483275 NDUFA2O43678 99 aa11.41□□□□□ -0.58
VARS-226ENST00000483275 ANXA2P07355 339 aaKnown RBP11.41□□□□□ -0.58
VARS-226ENST00000483275 AMY2BP19961 511 aa11.41□□□□□ -0.58
VARS-226ENST00000483275 CALB2P22676 271 aa11.41□□□□□ -0.58
VARS-226ENST00000483275 CX3CR1P49238 355 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms