RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 ZBED5Q49AG3 693 aa2.53□□□□□ -2
GTF3A-207ENST00000482655 C9orf64Q5T6V5 341 aa2.53□□□□□ -2
GTF3A-207ENST00000482655 SLC16A14Q7RTX9 510 aa2.53□□□□□ -2
GTF3A-207ENST00000482655 MS4A15Q8N5U1 240 aa2.53□□□□□ -2
GTF3A-207ENST00000482655 DCAF4L2Q8NA75 395 aa2.53□□□□□ -2
GTF3A-207ENST00000482655 OR4A4PQ8NGN8 299 aa2.53□□□□□ -2
GTF3A-207ENST00000482655 ACMSDQ8TDX5 336 aa2.53□□□□□ -2
GTF3A-207ENST00000482655 KLK6Q92876 244 aa2.53□□□□□ -2
GTF3A-207ENST00000482655 RPUSD4Q96CM3 377 aaKnown RBP2.53□□□□□ -2
GTF3A-207ENST00000482655 SDHCQ99643 169 aaPredicted RBP2.53□□□□□ -2
GTF3A-207ENST00000482655 SH3GL3Q99963 347 aa2.53□□□□□ -2
GTF3A-207ENST00000482655 LLPHQ9BRT6 129 aaKnown RBP2.53□□□□□ -2
GTF3A-207ENST00000482655 OSBPL10Q9BXB5 764 aa2.53□□□□□ -2
GTF3A-207ENST00000482655 IQCGQ9H095 443 aaKnown RBP2.53□□□□□ -2
GTF3A-207ENST00000482655 CLSTN2Q9H4D0 955 aa2.53□□□□□ -2
GTF3A-207ENST00000482655 ASB7Q9H672 318 aa2.53□□□□□ -2
GTF3A-207ENST00000482655 CSNK1G1Q9HCP0 422 aa2.53□□□□□ -2
GTF3A-207ENST00000482655 PLSCR3Q9NRY6 295 aa2.53□□□□□ -2
GTF3A-207ENST00000482655 PACSIN2Q9UNF0 486 aaPredicted RBP2.53□□□□□ -2
GTF3A-207ENST00000482655 TP53TG5Q9Y2B4 290 aa2.53□□□□□ -2
GTF3A-207ENST00000482655 GOLT1BQ9Y3E0 138 aa2.53□□□□□ -2
GTF3A-207ENST00000482655 SPTAN1Q13813 2472 aaKnown RBP2.53□□□□□ -2
GTF3A-207ENST00000482655 LRBAP50851 2863 aa2.53□□□□□ -2
GTF3A-207ENST00000482655 CRYBG3Q68DQ2 2970 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 HIVEP1P15822 2718 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 GOLGA6L7A0A1B0GV03 622 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 SERTM2A0A1B0GWG4 89 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 OR2AG2A6NM03 316 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 SIRPB1O00241 398 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 LAD1O00515 517 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 FGFR1OPO95684 399 aaKnown RBP2.52□□□□□ -2.01
GTF3A-207ENST00000482655 FGF4P08620 206 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 CT62P0C5K7 136 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 PNMA6AP0CW24 399 aaPredicted RBP2.52□□□□□ -2.01
GTF3A-207ENST00000482655 LIPCP11150 499 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 CCL4P13236 92 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 GTF2E2P29084 291 aaKnown RBP2.52□□□□□ -2.01
GTF3A-207ENST00000482655 HMOX2P30519 316 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 NSG1P42857 185 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 SLC1A1P43005 524 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 CSNK1DP48730 415 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 CX3CR1P49238 355 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 TMED10P49755 219 aaKnown RBP2.52□□□□□ -2.01
GTF3A-207ENST00000482655 ADARB1P78563 741 aaKnown RBP2.52□□□□□ -2.01
GTF3A-207ENST00000482655 CCL7P80098 99 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 TFAMQ00059 246 aaKnown RBP2.52□□□□□ -2.01
GTF3A-207ENST00000482655 ZNF92Q03936 586 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 CLINT1Q14677 625 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 CST6Q15828 149 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 DEFB133Q30KQ1 61 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 RFX4Q33E94 735 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 C22orf42Q6IC83 251 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 ANKRD26P1Q6NSI1 321 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 CERS6Q6ZMG9 384 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 ZNF836Q6ZNA1 936 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 BIVMQ86UB2 503 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 MMAAQ8IVH4 418 aaKnown RBP2.52□□□□□ -2.01
GTF3A-207ENST00000482655 LRRC8AQ8IWT6 810 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 CD302Q8IX05 232 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 TMEM61Q8N0U2 210 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 STK40Q8N2I9 435 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 TMEM86AQ8N2M4 240 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 RNF175Q8N4F7 328 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 LRRC52Q8N7C0 313 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 C20orf203Q8NBC4 194 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 OR2G3Q8NGZ4 309 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 OR6X1Q8NH79 312 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 SLC7A13Q8TCU3 470 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 MCOLN3Q8TDD5 553 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 GEMIN6Q8WXD5 167 aaKnown RBP2.52□□□□□ -2.01
GTF3A-207ENST00000482655 STARD8Q92502 1023 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 SGK3Q96BR1 496 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 XPO6Q96QU8 1125 aaKnown RBP2.52□□□□□ -2.01
GTF3A-207ENST00000482655 KLF6Q99612 283 aaPredicted RBP2.52□□□□□ -2.01
GTF3A-207ENST00000482655 SLC29A1Q99808 456 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 GEMIN7Q9H840 131 aaKnown RBP2.52□□□□□ -2.01
GTF3A-207ENST00000482655 ANKRA2Q9H9E1 313 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 CCL28Q9NRJ3 127 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 LYARQ9NX58 379 aaKnown RBP2.52□□□□□ -2.01
GTF3A-207ENST00000482655 FBXL12Q9NXK8 326 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 XCL2Q9UBD3 114 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 LSM7Q9UK45 103 aaKnown RBP2.52□□□□□ -2.01
GTF3A-207ENST00000482655 ATP6V1DQ9Y5K8 247 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 TLN1Q9Y490 2541 aaKnown RBP2.52□□□□□ -2.01
GTF3A-207ENST00000482655 NF1P21359 2839 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 NBASA2RRP1 2371 aa2.52□□□□□ -2.01
GTF3A-207ENST00000482655 MN1Q10571 1320 aaPredicted RBP2.51□□□□□ -2.01
GTF3A-207ENST00000482655 D6RAR5 112 aa2.51□□□□□ -2.01
GTF3A-207ENST00000482655 H0YIV9 168 aa2.51□□□□□ -2.01
GTF3A-207ENST00000482655 NVLO15381 856 aaKnown RBP2.51□□□□□ -2.01
GTF3A-207ENST00000482655 SLC31A1O15431 190 aa2.51□□□□□ -2.01
GTF3A-207ENST00000482655 YKT6O15498 198 aa2.51□□□□□ -2.01
GTF3A-207ENST00000482655 ATP8B1O43520 1251 aa2.51□□□□□ -2.01
GTF3A-207ENST00000482655 HUS1O60921 280 aa2.51□□□□□ -2.01
GTF3A-207ENST00000482655 DNAJB6O75190 326 aa2.51□□□□□ -2.01
GTF3A-207ENST00000482655 NPIPB7O75200 414 aa2.51□□□□□ -2.01
GTF3A-207ENST00000482655 TNFSF13O75888 250 aa2.51□□□□□ -2.01
GTF3A-207ENST00000482655 CLPXO76031 633 aa2.51□□□□□ -2.01
GTF3A-207ENST00000482655 CLIC3O95833 236 aa2.51□□□□□ -2.01
GTF3A-207ENST00000482655 INSP01308 110 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms