RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 SHFQ7M4L6 423 aa11.18□□□□□ -0.62
CTDSP1-208ENST00000482272 DPY19L4Q7Z388 723 aa11.18□□□□□ -0.62
CTDSP1-208ENST00000482272 TMEM179BQ7Z7N9 219 aa11.18□□□□□ -0.62
CTDSP1-208ENST00000482272 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.18□□□□□ -0.62
CTDSP1-208ENST00000482272 ERI1Q8IV48 349 aaKnown RBP11.18□□□□□ -0.62
CTDSP1-208ENST00000482272 PNLDC1Q8NA58 520 aaKnown RBP11.18□□□□□ -0.62
CTDSP1-208ENST00000482272 GIPC3Q8TF64 312 aa11.18□□□□□ -0.62
CTDSP1-208ENST00000482272 OTULINQ96BN8 352 aa11.18□□□□□ -0.62
CTDSP1-208ENST00000482272 SGK3Q96BR1 496 aa11.18□□□□□ -0.62
CTDSP1-208ENST00000482272 INTS14Q96SY0 518 aa11.18□□□□□ -0.62
CTDSP1-208ENST00000482272 MED20Q9H944 212 aa11.18□□□□□ -0.62
CTDSP1-208ENST00000482272 ZNF879B4DU55 563 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 P2RY10O00398 339 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 GNGT2O14610 69 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 TNFRSF13BO14836 293 aaPredicted RBP11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 FCN3O75636 299 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 TOX4O94842 621 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 GLCEO94923 617 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 ECDO95905 644 aaPredicted RBP11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 CST1P01037 141 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 PAICSP22234 425 aaKnown RBP11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 GSTT1P30711 240 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 FAM3AP98173 230 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 SNCBQ16143 134 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 C11orf91Q3C1V1 193 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 LINC01590Q5TEZ4 76 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 BRD3OSQ6XYD6 125 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 ZNF826PQ6ZT77 177 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 SLC16A9Q7RTY1 509 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 GCSAMQ8N6F7 178 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 IQCF1Q8N6M8 205 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 CCDC197Q8NCU1 140 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 OR52H1Q8NGJ2 320 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 OR6N2Q8NGY6 317 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 TAF15Q92804 592 aaKnown RBP eCLIP11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 ASB9Q96DX5 294 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 REEP6Q96HR9 211 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 AMELYQ99218 206 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 FEVQ99581 238 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 PCGF1Q9BSM1 259 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 ABHD6Q9BV23 337 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 CHID1Q9BWS9 393 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 OR10A2Q9H208 303 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 PPP1R3EQ9H7J1 279 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 UNKLQ9H9P5 680 aaKnown RBP11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 RNPEPL1Q9HAU8 725 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 NOX4Q9NPH5 578 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 CTSZQ9UBR2 303 aa11.17□□□□□ -0.62
CTDSP1-208ENST00000482272 FAM183AA6NL82 134 aa11.16□□□□□ -0.62
CTDSP1-208ENST00000482272 C22orf46C9J442 243 aa11.16□□□□□ -0.62
CTDSP1-208ENST00000482272 ACOT8O14734 319 aa11.16□□□□□ -0.62
CTDSP1-208ENST00000482272 HOXA3O43365 443 aaPredicted RBP11.16□□□□□ -0.62
CTDSP1-208ENST00000482272 TIPRLO75663 272 aa11.16□□□□□ -0.62
CTDSP1-208ENST00000482272 LHBP01229 141 aa11.16□□□□□ -0.62
CTDSP1-208ENST00000482272 GYPAP02724 150 aa11.16□□□□□ -0.62
CTDSP1-208ENST00000482272 H2BFMP0C1H6 154 aa11.16□□□□□ -0.62
CTDSP1-208ENST00000482272 MUC1P15941 1255 aaPredicted RBP11.16□□□□□ -0.62
CTDSP1-208ENST00000482272 NAA10P41227 235 aaPredicted RBP11.16□□□□□ -0.62
CTDSP1-208ENST00000482272 DEFB112Q30KQ8 113 aa11.16□□□□□ -0.62
CTDSP1-208ENST00000482272 METTL11BQ5VVY1 283 aa11.16□□□□□ -0.62
CTDSP1-208ENST00000482272 TEX36Q5VZQ5 186 aa11.16□□□□□ -0.62
CTDSP1-208ENST00000482272 FAM57BQ71RH2 274 aa11.16□□□□□ -0.62
CTDSP1-208ENST00000482272 ADGRG5Q8IZF4 528 aa11.16□□□□□ -0.62
CTDSP1-208ENST00000482272 FTMTQ8N4E7 242 aa11.16□□□□□ -0.62
CTDSP1-208ENST00000482272 CSNK2A3Q8NEV1 391 aa11.16□□□□□ -0.62
CTDSP1-208ENST00000482272 RNF133Q8WVZ7 376 aa11.16□□□□□ -0.62
CTDSP1-208ENST00000482272 FAM71F1Q96KD3 344 aaPredicted RBP11.16□□□□□ -0.62
CTDSP1-208ENST00000482272 C1orf21Q9H246 121 aa11.16□□□□□ -0.62
CTDSP1-208ENST00000482272 OR51V1Q9H2C8 321 aa11.16□□□□□ -0.62
CTDSP1-208ENST00000482272 RASSF4Q9H2L5 321 aa11.16□□□□□ -0.62
CTDSP1-208ENST00000482272 PRDM13Q9H4Q3 707 aa11.16□□□□□ -0.62
CTDSP1-208ENST00000482272 MARCH7Q9H992 704 aa11.16□□□□□ -0.62
CTDSP1-208ENST00000482272 TAS2R1Q9NYW7 299 aa11.16□□□□□ -0.62
CTDSP1-208ENST00000482272 MDFIC2A0A1B0GVS7 189 aa11.15□□□□□ -0.62
CTDSP1-208ENST00000482272 ARRDC5A6NEK1 342 aa11.15□□□□□ -0.62
CTDSP1-208ENST00000482272 SRRM5B3KS81 715 aa11.15□□□□□ -0.62
CTDSP1-208ENST00000482272 PRR23D1E9PI22 279 aaPredicted RBP11.15□□□□□ -0.62
CTDSP1-208ENST00000482272 TMPRSS2O15393 492 aa11.15□□□□□ -0.62
CTDSP1-208ENST00000482272 FAM107AO95990 144 aa11.15□□□□□ -0.62
CTDSP1-208ENST00000482272 HMGN1P05114 100 aa11.15□□□□□ -0.62
CTDSP1-208ENST00000482272 CRYBA1P05813 215 aa11.15□□□□□ -0.62
CTDSP1-208ENST00000482272 PRR23D2P0DMB1 279 aaPredicted RBP11.15□□□□□ -0.62
CTDSP1-208ENST00000482272 HOXB6P17509 224 aaKnown RBP11.15□□□□□ -0.62
CTDSP1-208ENST00000482272 POU1F1P28069 291 aa11.15□□□□□ -0.62
CTDSP1-208ENST00000482272 CFHR2P36980 270 aa11.15□□□□□ -0.62
CTDSP1-208ENST00000482272 GNALP38405 381 aa11.15□□□□□ -0.62
CTDSP1-208ENST00000482272 ZNF121P58317 390 aaPredicted RBP11.15□□□□□ -0.62
CTDSP1-208ENST00000482272 GINS1Q14691 196 aa11.15□□□□□ -0.62
CTDSP1-208ENST00000482272 PDCD1Q15116 288 aa11.15□□□□□ -0.62
CTDSP1-208ENST00000482272 MICBQ29980 383 aa11.15□□□□□ -0.62
CTDSP1-208ENST00000482272 Q6YL49 198 aa11.15□□□□□ -0.62
CTDSP1-208ENST00000482272 FAM90A1Q86YD7 464 aa11.15□□□□□ -0.62
CTDSP1-208ENST00000482272 C11orf53Q8IXP5 236 aa11.15□□□□□ -0.62
CTDSP1-208ENST00000482272 HS3ST5Q8IZT8 346 aa11.15□□□□□ -0.62
CTDSP1-208ENST00000482272 OR1M1Q8NGA1 313 aa11.15□□□□□ -0.62
CTDSP1-208ENST00000482272 THEM6Q8WUY1 208 aa11.15□□□□□ -0.62
CTDSP1-208ENST00000482272 LRRC29Q8WV35 223 aa11.15□□□□□ -0.62
CTDSP1-208ENST00000482272 GATAD2BQ8WXI9 593 aa11.15□□□□□ -0.62
CTDSP1-208ENST00000482272 TMIGD2Q96BF3 282 aa11.15□□□□□ -0.62
CTDSP1-208ENST00000482272 CCDC124Q96CT7 223 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms