RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 ANKRD16Q6P6B7 361 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 TRAT1Q6PIZ9 186 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 UQCC3Q6UW78 93 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 SIAH3Q8IW03 269 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 DEFB108BQ8NET1 73 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 BBS1Q8NFJ9 593 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 OR1S2Q8NGQ3 325 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 OR4C3Q8NH37 302 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 CMTM2Q8TAZ6 248 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 SLC25A32Q9H2D1 315 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 PLAC1Q9HBJ0 212 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 FAM186AA6NE01 2351 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 IFITM5A6NNB3 132 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 MOSPD3O75425 235 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 UBE2IP63279 158 aaKnown RBP8.51□□□□□ -1.05
GARNL3-216ENST00000481242 BAXQ07812 192 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 KCNIP4Q6PIL6 250 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 PXT1Q8NFP0 134 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 OR51A4Q8NGJ6 313 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 SMIM3Q9BZL3 60 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 BANF2Q9H503 90 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 M0QZ24 198 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 DUSP1P28562 367 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 OPRM1P35372 400 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 NKX2-1P43699 371 aaPredicted RBP8.51□□□□□ -1.05
GARNL3-216ENST00000481242 ZNF121P58317 390 aaPredicted RBP8.51□□□□□ -1.05
GARNL3-216ENST00000481242 ERHP84090 104 aaKnown RBP8.51□□□□□ -1.05
GARNL3-216ENST00000481242 SORDQ00796 357 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 C9orf152Q5JTZ5 239 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 SLC25A26Q70HW3 274 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 ASB5Q8WWX0 329 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 SLC39A7Q92504 469 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 RDH5Q92781 318 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 UBE2FQ969M7 185 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 TRMT61AQ96FX7 289 aaKnown RBP8.51□□□□□ -1.05
GARNL3-216ENST00000481242 COMMD5Q9GZQ3 224 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 C11orf54Q9H0W9 315 aaPredicted RBP8.51□□□□□ -1.05
GARNL3-216ENST00000481242 METTL17Q9H7H0 456 aaPredicted RBP8.51□□□□□ -1.05
GARNL3-216ENST00000481242 SIGLEC7Q9Y286 467 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 AMDHD2Q9Y303 409 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 TRAV1-2A0A0B4J238 106 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 NPIPB8E9PQR5 432 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 EDN3P14138 238 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 GNB2P62879 340 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 DHODHQ02127 395 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 OSR2Q8N2R0 312 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 CMTM3Q96MX0 182 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 GNRHR2Q96P88 292 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 GDF15Q99988 308 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 SEC22CQ9BRL7 303 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 COL5A3P25940 1745 aaPredicted RBP8.51□□□□□ -1.05
GARNL3-216ENST00000481242 ATF1P18846 271 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 ZNF468Q5VIY5 522 aaPredicted RBP8.51□□□□□ -1.05
GARNL3-216ENST00000481242 HIST2H3AQ71DI3 136 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 NAA40Q86UY6 237 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 CELF2-AS1Q8N7Q2 184 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 EID2BQ96D98 161 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 YIPF6Q96EC8 236 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 GALNT9Q9HCQ5 603 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 HIF1ANQ9NWT6 349 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 RNF150Q9ULK6 438 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 MCM3APO60318 1980 aa8.51□□□□□ -1.05
GARNL3-216ENST00000481242 MDFIC2A0A1B0GVS7 189 aa8.5□□□□□ -1.05
GARNL3-216ENST00000481242 AQP7P3A6NL99 342 aa8.5□□□□□ -1.05
GARNL3-216ENST00000481242 PMP2P02689 132 aa8.5□□□□□ -1.05
GARNL3-216ENST00000481242 TMIGD3P0DMS9 266 aaPredicted RBP8.5□□□□□ -1.05
GARNL3-216ENST00000481242 GALP22466 123 aa8.5□□□□□ -1.05
GARNL3-216ENST00000481242 STARD6P59095 220 aa8.5□□□□□ -1.05
GARNL3-216ENST00000481242 ARL16Q0P5N6 197 aa8.5□□□□□ -1.05
GARNL3-216ENST00000481242 SNTB1Q13884 538 aaKnown RBP8.5□□□□□ -1.05
GARNL3-216ENST00000481242 MICBQ29980 383 aa8.5□□□□□ -1.05
GARNL3-216ENST00000481242 OR5M9Q8NGP3 310 aa8.5□□□□□ -1.05
GARNL3-216ENST00000481242 OR10R2Q8NGX6 335 aa8.5□□□□□ -1.05
GARNL3-216ENST00000481242 ASB13Q8WXK3 278 aa8.5□□□□□ -1.05
GARNL3-216ENST00000481242 ST8SIA2Q92186 375 aa8.5□□□□□ -1.05
GARNL3-216ENST00000481242 ZDHHC16Q969W1 377 aa8.5□□□□□ -1.05
GARNL3-216ENST00000481242 FBXO17Q96EF6 278 aa8.5□□□□□ -1.05
GARNL3-216ENST00000481242 MRPS24Q96EL2 167 aaKnown RBP8.5□□□□□ -1.05
GARNL3-216ENST00000481242 OCIAD1Q9NX40 245 aa8.5□□□□□ -1.05
GARNL3-216ENST00000481242 DNAJB12Q9NXW2 375 aaKnown RBP8.5□□□□□ -1.05
GARNL3-216ENST00000481242 DNAJC13O75165 2243 aa8.5□□□□□ -1.05
GARNL3-216ENST00000481242 IGHV3-15A0A0B4J1V0 119 aa8.5□□□□□ -1.05
GARNL3-216ENST00000481242 A0A1W2PQF6 199 aa8.5□□□□□ -1.05
GARNL3-216ENST00000481242 LGALS8O00214 317 aa8.5□□□□□ -1.05
GARNL3-216ENST00000481242 PPP1R2P9O14990 202 aa8.5□□□□□ -1.05
GARNL3-216ENST00000481242 FABP7O15540 132 aa8.5□□□□□ -1.05
GARNL3-216ENST00000481242 RAE1P78406 368 aaKnown RBP8.5□□□□□ -1.05
GARNL3-216ENST00000481242 CST9LP1Q5W188 147 aa8.5□□□□□ -1.05
GARNL3-216ENST00000481242 LFNGQ8NES3 379 aa8.5□□□□□ -1.05
GARNL3-216ENST00000481242 OR10D3Q8NH80 312 aa8.5□□□□□ -1.05
GARNL3-216ENST00000481242 MARC2Q969Z3 335 aa8.5□□□□□ -1.05
GARNL3-216ENST00000481242 KTI12Q96EK9 354 aaPredicted RBP8.5□□□□□ -1.05
GARNL3-216ENST00000481242 CYSLTR2Q9NS75 346 aa8.5□□□□□ -1.05
GARNL3-216ENST00000481242 TAS2R5Q9NYW4 299 aa8.5□□□□□ -1.05
GARNL3-216ENST00000481242 FITM1A5D6W6 292 aa8.5□□□□□ -1.05
GARNL3-216ENST00000481242 CD300LDQ6UXZ3 194 aa8.5□□□□□ -1.05
GARNL3-216ENST00000481242 RNF141Q8WVD5 230 aa8.5□□□□□ -1.05
GARNL3-216ENST00000481242 RND1Q92730 232 aa8.5□□□□□ -1.05
GARNL3-216ENST00000481242 RAB1BQ9H0U4 201 aa8.5□□□□□ -1.05
GARNL3-216ENST00000481242 ST3GAL6Q9Y274 331 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms