RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	XRCC2	O43543	280 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	SPOP	O43791	374 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	FKBP6	O75344	327 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	CCNB2	O95067	398 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	FARS2	O95363	451 aa	Known RBP	0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	OTC	P00480	354 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	IGHV3-11	P01762	117 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	TRBC1	P01850	177 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	HBE1	P02100	147 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	IFNW1	P05000	195 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	SERPINA5	P05154	406 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	ACSM4	P0C7M7	580 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	GFAP	P14136	432 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	ZNF43	P17038	809 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	NSG1	P42857	185 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	GALR1	P47211	349 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	CSNK1E	P49674	416 aa	Known RBP	0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	BCAP31	P51572	246 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	PSMD4	P55036	377 aa	Known RBP	0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	GFER	P55789	205 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	RAB11A	P62491	216 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	RPL23	P62829	140 aa	Known RBP	0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	KDSR	Q06136	332 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	RAD51	Q06609	339 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	ZNF33A	Q06730	810 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	SPAG1	Q07617	926 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	ART3	Q13508	389 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	TRAM2	Q15035	370 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	RAB11B	Q15907	218 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	HSDL1	Q3SXM5	330 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	KLHL12	Q53G59	568 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	CAVIN4	Q5BKX8	364 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	TPTE2P1	Q5T6R2	138 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	PIP5KL1	Q5T9C9	394 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	MLIP	Q5VWP3	458 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	RWDD4	Q6NW29	188 aa	Known RBP	0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	CLEC2A	Q6UVW9	174 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	USP50	Q70EL3	339 aa	Predicted RBP	0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	NIPA1	Q7RTP0	329 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	APRG1	Q8IVJ8	170 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	NKAIN4	Q8IVV8	208 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	OFCC1	Q8IZS5	231 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	CBR4	Q8N4T8	237 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	MS4A15	Q8N5U1	240 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	ZNF645	Q8N7E2	425 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	PROKR2	Q8NFJ6	384 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	OR9G4	Q8NGQ1	327 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	OR2A1	Q8NGT9	310 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	OR5K2	Q8NHB8	316 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	LYPD6B	Q8NI32	183 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	GLYATL2	Q8WU03	294 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	MITD1	Q8WV92	249 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	CAPSL	Q8WWF8	208 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	TMEM230	Q96A57	120 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	GPR21	Q99679	349 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	BPIFA3	Q9BQP9	254 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	CALN1	Q9BXU9	219 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	ACTR3C	Q9C0K3	210 aa	Predicted RBP	0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	LINC00574	Q9H8X3	128 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	MCUB	Q9NWR8	336 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	RHBDL2	Q9NX52	303 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	ADA2	Q9NZK5	511 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	CHMP5	Q9NZZ3	219 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	MYEF2	Q9P2K5	600 aa	Known RBP	0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	RAB23	Q9ULC3	237 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	TBC1D24	Q9ULP9	559 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	FLVCR2	Q9UPI3	526 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	CHTOP	Q9Y3Y2	248 aa	Known RBP	0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	BZW2	Q9Y6E2	419 aa	Known RBP	0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	KCNE3	Q9Y6H6	103 aa		0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	COL22A1	Q8NFW1	1626 aa	Predicted RBP	0.97	□□□□□ -2.25
CCNL1-223	ENST00000481173	TRAV25	A0A0B4J276	109 aa		0.96	□□□□□ -2.26
CCNL1-223	ENST00000481173		A0A1W2PRF3	423 aa		0.96	□□□□□ -2.26
CCNL1-223	ENST00000481173		A0A1W2PRM7	423 aa		0.96	□□□□□ -2.26
CCNL1-223	ENST00000481173	TSPAN11	A1L157	253 aa		0.96	□□□□□ -2.26
CCNL1-223	ENST00000481173		A6NDN8	102 aa		0.96	□□□□□ -2.26
CCNL1-223	ENST00000481173	OR2AG2	A6NM03	316 aa		0.96	□□□□□ -2.26
CCNL1-223	ENST00000481173	SYCE1L	A8MT33	242 aa		0.96	□□□□□ -2.26
CCNL1-223	ENST00000481173	ZNF701	M0R085	212 aa	Predicted RBP	0.96	□□□□□ -2.26
CCNL1-223	ENST00000481173	OVOL1	O14753	267 aa		0.96	□□□□□ -2.26
CCNL1-223	ENST00000481173	BCKDK	O14874	412 aa		0.96	□□□□□ -2.26
CCNL1-223	ENST00000481173	SCAMP2	O15127	329 aa	Known RBP	0.96	□□□□□ -2.26
CCNL1-223	ENST00000481173	NVL	O15381	856 aa	Known RBP	0.96	□□□□□ -2.26
CCNL1-223	ENST00000481173	RAD51C	O43502	376 aa		0.96	□□□□□ -2.26
CCNL1-223	ENST00000481173	CTAG2	O75638	210 aa		0.96	□□□□□ -2.26
CCNL1-223	ENST00000481173	GLS	O94925	669 aa	Predicted RBP	0.96	□□□□□ -2.26
CCNL1-223	ENST00000481173	SEMA3D	O95025	777 aa		0.96	□□□□□ -2.26
CCNL1-223	ENST00000481173	LCA5L	O95447	670 aa		0.96	□□□□□ -2.26
CCNL1-223	ENST00000481173	PAH	P00439	452 aa		0.96	□□□□□ -2.26
CCNL1-223	ENST00000481173	MB	P02144	154 aa		0.96	□□□□□ -2.26
CCNL1-223	ENST00000481173	ARG1	P05089	322 aa		0.96	□□□□□ -2.26
CCNL1-223	ENST00000481173	KRT16	P08779	473 aa		0.96	□□□□□ -2.26
CCNL1-223	ENST00000481173	UBC	P0CG48	685 aa	Known RBP	0.96	□□□□□ -2.26
CCNL1-223	ENST00000481173	STAG3L2	P0CL84	134 aa		0.96	□□□□□ -2.26
CCNL1-223	ENST00000481173	INAFM2	P0DMQ5	153 aa		0.96	□□□□□ -2.26
CCNL1-223	ENST00000481173	CT45A6	P0DMU7	189 aa		0.96	□□□□□ -2.26
CCNL1-223	ENST00000481173	CT45A5	P0DMU8	189 aa		0.96	□□□□□ -2.26
CCNL1-223	ENST00000481173	CT45A7	P0DMV0	189 aa		0.96	□□□□□ -2.26
CCNL1-223	ENST00000481173	ERG	P11308	486 aa		0.96	□□□□□ -2.26
CCNL1-223	ENST00000481173	MYL9	P24844	172 aa		0.96	□□□□□ -2.26

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms